RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Atp6v0bQ91V37 205 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm29289A0A087WPY7 166 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm4064A0A087WR82 380 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm10352B2RWR6 380 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm21693J3QK27 380 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Rbmy1a1O35698 380 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Defa1P11477 93 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 UrahQ9CRB3 118 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 VsirQ9D659 308 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Lyrm9Q3UN90 78 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Chac1Q8R3J5 223 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ssbp1Q9CYR0 152 aaKnown RBP11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Rs1Q9Z1L4 224 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 P01738 130 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 P04942 107 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 NrgnP60761 78 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Plxnb3Q9QY40 1902 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Nckap5E9QAE1 1909 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Lhfpl1Q80SV1 220 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Edn1P22387 202 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm815Q3UWS2 115 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ang5Q5GAN1 145 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Trav7d-3Q5R1I1 112 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Trav7-2Q5R1I3 112 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Mapk1ip1Q9D7G9 263 aa11.26□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Wfdc9Q3UW41 83 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 E030018B13RikJ3QMS9 113 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gpx1P11352 201 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Nbl1Q61477 178 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Taf15Q8BQ46 557 aaKnown RBP11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Tm4sf20Q9CQY8 226 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Synj2bpQ9D6K5 145 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ighv1-64A0A075B5X3 117 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Igkv8-34A0A0G2JDU0 121 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ccl17F6R5P4 103 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Wipf2Q6PEV3 440 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm17324Q8C6J8 137 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm9913Q8BQQ2 135 aa11.25□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm5089A1L3C8 106 aa11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Timm10bQ9WV96 100 aa11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Fhl1P97447 280 aaKnown RBP11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 SeboxP70368 190 aa11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Lrrk2Q5S006 2527 aa11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm7257D3YX25 99 aa11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ankrd39Q9D2X0 183 aa11.24□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ighv1-52A0A0A6YXC3 117 aa11.23□□□□□ -0.61
Col2a1-202ENSMUST00000088355 H2al1jA2BFR3 109 aa11.23□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Cox8bP48772 70 aa11.23□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm10188Q3V432 135 aa11.23□□□□□ -0.61
Col2a1-202ENSMUST00000088355 4933414I15RikQ9D4D5 133 aa11.23□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ighv8-2A0A0A6YW58 119 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 CtsbP10605 339 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Dkk4Q8VEJ3 221 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Igkv4-81A0A0G2JEY5 119 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 H2al1nQ497L1 109 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Pom121l2Q5SW25 972 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Col24a1Q30D77 1733 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ttc28Q80XJ3 2450 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm45785A0A1B0GT05 94 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 GfyJ3KML8 504 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 March3Q8BRX9 218 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gtsf1Q9DAN6 167 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Sptbn4E9PX29 2561 aa11.22□□□□□ -0.61
Col2a1-202ENSMUST00000088355 9130230L23RikQ8CC80 163 aa11.21□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Ncoa6Q9JL19 2067 aa11.21□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Igkv8-24A0A140T8P5 121 aa11.21□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Foxi3E0CZH3 425 aa11.21□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Olfr984Q8VFN1 314 aa11.21□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Gm29423A0A087WRM1 55 aa11.21□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Vmn1r197Q8R265 298 aa11.21□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Ighv3-1A0A075B5S6 116 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gata3P23772 443 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Zic4Q61467 341 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Sfta2E9PXB6 77 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Srsf2Q62093 221 aaKnown RBP11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Prop1P97458 223 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Igkv4-62A0A0G2JDW9 117 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Hbb-b2P02089 147 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Mfap4Q9D1H9 257 aa11.2□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Igkv3-9A0A140T8P4 119 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 4930447F04RikA2AFR2 126 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gm20517G3UVU6 152 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Spag11Q8K4N2 71 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Rnf183Q8QZS5 190 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Tnfrsf13bQ9ET35 249 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Sorl1O88307 2215 aaKnown RBP11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gm17455G3UW87 128 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Arhgef17Q80U35 2057 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gm12169F2Z474 250 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gm21370Q3T9V6 190 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gm10553J3QPF1 123 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 P04943 107 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 BlcapP62951 87 aa11.19□□□□□ -0.62
Col2a1-202ENSMUST00000088355 9130213A22RikQ3V3T2 120 aa11.18□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Q8C708 225 aa11.18□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Ighv1-50A0A075B5W1 117 aa11.18□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Gm26727M0QWT1 121 aa11.18□□□□□ -0.62
Col2a1-202ENSMUST00000088355 PolP10400 120 aa11.18□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Ighv1-23A0A0A6YVW3 117 aa11.17□□□□□ -0.62
Col2a1-202ENSMUST00000088355 Hbb-bsA8DUK4 147 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 98 ms