Protein–RNA interactions for Protein: Q80U35

Arhgef17, Rho guanine nucleotide exchange factor 17, mousemouse

Predictions only

Length 2,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef17Q80U35 Gm25239-201ENSMUST00000174915 86 ntBASIC33.38■■■□□ 2.93
Arhgef17Q80U35 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Arhgef17Q80U35 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Arhgef17Q80U35 Gm24109-201ENSMUST00000175489 103 ntBASIC29.09■■■□□ 2.25
Arhgef17Q80U35 Gm15042-201ENSMUST00000120212 883 ntBASIC28.95■■■□□ 2.23
Arhgef17Q80U35 Gm15045-201ENSMUST00000117359 883 ntBASIC28.49■■■□□ 2.15
Arhgef17Q80U35 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Arhgef17Q80U35 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Arhgef17Q80U35 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef17Q80U35 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef17Q80U35 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef17Q80U35 Gm23366-201ENSMUST00000175022 89 ntBASIC27.76■■■□□ 2.03
Arhgef17Q80U35 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Arhgef17Q80U35 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.26■■□□□ 1.95
Arhgef17Q80U35 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
Arhgef17Q80U35 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Arhgef17Q80U35 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.88■■□□□ 1.89
Arhgef17Q80U35 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
Arhgef17Q80U35 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Arhgef17Q80U35 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Arhgef17Q80U35 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Arhgef17Q80U35 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Arhgef17Q80U35 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.65■■□□□ 1.86
Arhgef17Q80U35 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Arhgef17Q80U35 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef17Q80U35 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef17Q80U35 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Arhgef17Q80U35 Gm25238-201ENSMUST00000174914 89 ntBASIC26.4■■□□□ 1.82
Arhgef17Q80U35 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.38■■□□□ 1.81
Arhgef17Q80U35 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Arhgef17Q80U35 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Arhgef17Q80U35 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Arhgef17Q80U35 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.18■■□□□ 1.78
Arhgef17Q80U35 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Arhgef17Q80U35 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Arhgef17Q80U35 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Arhgef17Q80U35 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Arhgef17Q80U35 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
Arhgef17Q80U35 Psd-208ENSMUST00000224556 2034 ntBASIC25.73■■□□□ 1.71
Arhgef17Q80U35 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.62■■□□□ 1.69
Arhgef17Q80U35 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.59■■□□□ 1.69
Arhgef17Q80U35 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.51■■□□□ 1.67
Arhgef17Q80U35 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
Arhgef17Q80U35 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Arhgef17Q80U35 Gm27325-201ENSMUST00000175467 74 ntBASIC25.44■■□□□ 1.66
Arhgef17Q80U35 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Arhgef17Q80U35 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.35■■□□□ 1.65
Arhgef17Q80U35 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef17Q80U35 Gm25262-201ENSMUST00000174934 133 ntBASIC25.24■■□□□ 1.63
Arhgef17Q80U35 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Arhgef17Q80U35 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Arhgef17Q80U35 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.05■■□□□ 1.6
Arhgef17Q80U35 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Arhgef17Q80U35 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Arhgef17Q80U35 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.02■■□□□ 1.6
Arhgef17Q80U35 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25■■□□□ 1.59
Arhgef17Q80U35 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Arhgef17Q80U35 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.97■■□□□ 1.59
Arhgef17Q80U35 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.96■■□□□ 1.59
Arhgef17Q80U35 Rab21-202ENSMUST00000218831 843 ntBASIC24.95■■□□□ 1.59
Arhgef17Q80U35 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.93■■□□□ 1.58
Arhgef17Q80U35 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
Arhgef17Q80U35 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Arhgef17Q80U35 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Arhgef17Q80U35 Gm26115-201ENSMUST00000175605 87 ntBASIC24.9■■□□□ 1.58
Arhgef17Q80U35 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Arhgef17Q80U35 Gm8109-201ENSMUST00000194076 746 ntBASIC24.89■■□□□ 1.58
Arhgef17Q80U35 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.83■■□□□ 1.57
Arhgef17Q80U35 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
Arhgef17Q80U35 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.74■■□□□ 1.55
Arhgef17Q80U35 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Arhgef17Q80U35 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Arhgef17Q80U35 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Arhgef17Q80U35 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef17Q80U35 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Arhgef17Q80U35 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Arhgef17Q80U35 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Arhgef17Q80U35 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Arhgef17Q80U35 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Arhgef17Q80U35 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Arhgef17Q80U35 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.52■■□□□ 1.52
Arhgef17Q80U35 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Arhgef17Q80U35 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Arhgef17Q80U35 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Arhgef17Q80U35 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef17Q80U35 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Arhgef17Q80U35 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Arhgef17Q80U35 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Arhgef17Q80U35 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Arhgef17Q80U35 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Arhgef17Q80U35 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Arhgef17Q80U35 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Arhgef17Q80U35 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.23■■□□□ 1.47
Arhgef17Q80U35 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.22■■□□□ 1.47
Arhgef17Q80U35 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.22■■□□□ 1.47
Arhgef17Q80U35 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.21■■□□□ 1.47
Arhgef17Q80U35 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.21■■□□□ 1.47
Arhgef17Q80U35 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Arhgef17Q80U35 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Arhgef17Q80U35 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms