RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Rhox8Q6VSS7 320 aa25.73■■□□□ 1.71
Col2a1-202ENSMUST00000088355 NischQ80TM9 1593 aa23.09■■□□□ 1.29
Col2a1-202ENSMUST00000088355 Esf1Q3V1V3 845 aaKnown RBP22.91■■□□□ 1.26
Col2a1-202ENSMUST00000088355 Ccdc136Q3TVA9 1136 aa22.89■■□□□ 1.26
Col2a1-202ENSMUST00000088355 Ehmt2Q9Z148 1263 aaKnown RBP22.74■■□□□ 1.23
Col2a1-202ENSMUST00000088355 Cngb1E1AZ71 1325 aa22.68■■□□□ 1.22
Col2a1-202ENSMUST00000088355 Trim41Q5NCC3 630 aa22.61■■□□□ 1.21
Col2a1-202ENSMUST00000088355 Rpgrip1Q9EPQ2 1331 aa22.53■■□□□ 1.2
Col2a1-202ENSMUST00000088355 Zeb1Q64318 1117 aa22.35■■□□□ 1.17
Col2a1-202ENSMUST00000088355 Gab3Q8BSM5 595 aa22.29■■□□□ 1.16
Col2a1-202ENSMUST00000088355 Npm2Q80W85 207 aa22.24■■□□□ 1.15
Col2a1-202ENSMUST00000088355 Ube2uB1AUC4 352 aa22.09■■□□□ 1.13
Col2a1-202ENSMUST00000088355 Wdr66E9Q743 1299 aa21.96■■□□□ 1.11
Col2a1-202ENSMUST00000088355 Myt1lP97500 1187 aa21.94■■□□□ 1.1
Col2a1-202ENSMUST00000088355 Las1lA2BE28 776 aaKnown RBP21.94■■□□□ 1.1
Col2a1-202ENSMUST00000088355 Abcc9P70170 1546 aa21.75■■□□□ 1.07
Col2a1-202ENSMUST00000088355 Il27Q8K3I6 234 aa21.52■■□□□ 1.04
Col2a1-202ENSMUST00000088355 Zcchc6Q5BLK4 1491 aaKnown RBP21.48■■□□□ 1.03
Col2a1-202ENSMUST00000088355 UbtfP25976 765 aaKnown RBP21.37■■□□□ 1.01
Col2a1-202ENSMUST00000088355 Gm35339A0A140LHH9 1649 aa21.36■■□□□ 1.01
Col2a1-202ENSMUST00000088355 HrcG5E8J6 738 aa21.34■■□□□ 1.01
Col2a1-202ENSMUST00000088355 Ccdc180J3QNE4 1664 aa21.25■□□□□ 0.99
Col2a1-202ENSMUST00000088355 NefmP08553 848 aa21.15■□□□□ 0.98
Col2a1-202ENSMUST00000088355 Abcc8B2RUS7 1588 aa21.13■□□□□ 0.97
Col2a1-202ENSMUST00000088355 Acin1Q9JIX8 1338 aaKnown RBP21.07■□□□□ 0.96
Col2a1-202ENSMUST00000088355 Rtl1Q7M732 1744 aa21.07■□□□□ 0.96
Col2a1-202ENSMUST00000088355 Pelp1Q9DBD5 1123 aaKnown RBP21.05■□□□□ 0.96
Col2a1-202ENSMUST00000088355 Npm1Q61937 292 aaKnown RBP20.9■□□□□ 0.94
Col2a1-202ENSMUST00000088355 Slc24a1Q91WD8 1130 aa20.87■□□□□ 0.93
Col2a1-202ENSMUST00000088355 Ap3b1Q9Z1T1 1105 aa20.86■□□□□ 0.93
Col2a1-202ENSMUST00000088355 Fam50aQ9WV03 339 aaKnown RBP20.79■□□□□ 0.92
Col2a1-202ENSMUST00000088355 Stra8P70278 393 aa20.79■□□□□ 0.92
Col2a1-202ENSMUST00000088355 Neurod1Q60867 357 aa20.64■□□□□ 0.89
Col2a1-202ENSMUST00000088355 Anp32bQ9EST5 272 aaKnown RBP20.54■□□□□ 0.88
Col2a1-202ENSMUST00000088355 Brd4Q9ESU6 1400 aaKnown RBP20.53■□□□□ 0.88
Col2a1-202ENSMUST00000088355 CenpbP27790 599 aa20.53■□□□□ 0.88
Col2a1-202ENSMUST00000088355 Os9Q8K2C7 672 aa20.52■□□□□ 0.88
Col2a1-202ENSMUST00000088355 NclP09405 707 aaKnown RBP20.52■□□□□ 0.87
Col2a1-202ENSMUST00000088355 Cdk11bP24788 784 aaKnown RBP20.43■□□□□ 0.86
Col2a1-202ENSMUST00000088355 NrdcQ8BHG1 1161 aa20.4■□□□□ 0.86
Col2a1-202ENSMUST00000088355 Ppargc1bQ8VHJ7 1014 aa20.4■□□□□ 0.86
Col2a1-202ENSMUST00000088355 Lmod2Q3UHZ5 550 aa20.35■□□□□ 0.85
Col2a1-202ENSMUST00000088355 Ubl4bQ9CQ84 188 aa20.33■□□□□ 0.85
Col2a1-202ENSMUST00000088355 Rb1cc1Q9ESK9 1588 aa20.29■□□□□ 0.84
Col2a1-202ENSMUST00000088355 Pcgf6Q99NA9 353 aa20.27■□□□□ 0.84
Col2a1-202ENSMUST00000088355 Zbtb7cQ8VCZ7 619 aa20.27■□□□□ 0.83
Col2a1-202ENSMUST00000088355 TonslQ6NZL6 1363 aa20.24■□□□□ 0.83
Col2a1-202ENSMUST00000088355 Ifnlr1Q8CGK5 535 aa20.24■□□□□ 0.83
Col2a1-202ENSMUST00000088355 Nop58Q6DFW4 536 aaKnown RBP20.23■□□□□ 0.83
Col2a1-202ENSMUST00000088355 NacadQ5SWP3 1504 aa20.23■□□□□ 0.83
Col2a1-202ENSMUST00000088355 Plekhg3Q4VAC9 1341 aa20.21■□□□□ 0.83
Col2a1-202ENSMUST00000088355 Hnrnpul2Q00PI9 745 aaKnown RBP20.2■□□□□ 0.82
Col2a1-202ENSMUST00000088355 Mier1Q5UAK0 511 aa20.19■□□□□ 0.82
Col2a1-202ENSMUST00000088355 Gm13697A2AK42 830 aa20.19■□□□□ 0.82
Col2a1-202ENSMUST00000088355 Eif5bQ05D44 1216 aaKnown RBP20.16■□□□□ 0.82
Col2a1-202ENSMUST00000088355 Amer1Q7TS75 1132 aa20.14■□□□□ 0.82
Col2a1-202ENSMUST00000088355 NeflP08551 543 aa20.07■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Fkbp15Q6P9Q6 1216 aaKnown RBP20.06■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Tnnt3Q9QZ47 272 aa20.04■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Supt5hO55201 1082 aaKnown RBP20.03■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Hdac5Q9Z2V6 1113 aa20.02■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Dcaf1Q80TR8 1506 aa20.02■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Clip1Q922J3 1391 aa20.02■□□□□ 0.8
Col2a1-202ENSMUST00000088355 Chic1Q8CBW7 227 aa20.01■□□□□ 0.79
Col2a1-202ENSMUST00000088355 Cep164Q5DU05 1446 aa19.99■□□□□ 0.79
Col2a1-202ENSMUST00000088355 Erich6D3Z6S9 713 aa19.92■□□□□ 0.78
Col2a1-202ENSMUST00000088355 Ttbk1Q6PCN3 1308 aa19.9■□□□□ 0.78
Col2a1-202ENSMUST00000088355 Zbtb4Q5F293 982 aa19.89■□□□□ 0.77
Col2a1-202ENSMUST00000088355 Atp1b4Q99ME6 356 aa19.88■□□□□ 0.77
Col2a1-202ENSMUST00000088355 Baz1aO88379 1555 aa19.84■□□□□ 0.77
Col2a1-202ENSMUST00000088355 Eid3Q3V124 375 aa19.84■□□□□ 0.77
Col2a1-202ENSMUST00000088355 Ccer2J3QPU5 274 aa19.83■□□□□ 0.76
Col2a1-202ENSMUST00000088355 Gm13695A2AK44 830 aa19.82■□□□□ 0.76
Col2a1-202ENSMUST00000088355 Rsf1E9PWW9 1441 aaKnown RBP19.82■□□□□ 0.76
Col2a1-202ENSMUST00000088355 Ercc6F8VPZ5 1481 aa19.81■□□□□ 0.76
Col2a1-202ENSMUST00000088355 Kif15Q6P9L6 1387 aa19.77■□□□□ 0.76
Col2a1-202ENSMUST00000088355 Plppr3Q7TPB0 716 aa19.71■□□□□ 0.75
Col2a1-202ENSMUST00000088355 Mapk8ip2Q9ERE9 830 aa19.71■□□□□ 0.75
Col2a1-202ENSMUST00000088355 4933416C03RikQ3V063 378 aa19.7■□□□□ 0.74
Col2a1-202ENSMUST00000088355 Prdm10Q3UTQ7 1184 aa19.7■□□□□ 0.74
Col2a1-202ENSMUST00000088355 ClspnQ80YR7 1315 aa19.69■□□□□ 0.74
Col2a1-202ENSMUST00000088355 Clstn2Q9ER65 966 aa19.66■□□□□ 0.74
Col2a1-202ENSMUST00000088355 Golga3P55937 1487 aa19.65■□□□□ 0.74
Col2a1-202ENSMUST00000088355 Ccdc18Q640L5 1455 aa19.64■□□□□ 0.73
Col2a1-202ENSMUST00000088355 BlmO88700 1416 aa19.64■□□□□ 0.73
Col2a1-202ENSMUST00000088355 Nlrp6Q91WS2 869 aa19.63■□□□□ 0.73
Col2a1-202ENSMUST00000088355 Kdm5dQ62240 1548 aa19.63■□□□□ 0.73
Col2a1-202ENSMUST00000088355 Setd5Q5XJV7 1441 aa19.6■□□□□ 0.73
Col2a1-202ENSMUST00000088355 Chic2Q9D9G3 165 aa19.57■□□□□ 0.72
Col2a1-202ENSMUST00000088355 Safb2Q80YR5 991 aaKnown RBP19.53■□□□□ 0.72
Col2a1-202ENSMUST00000088355 Pds5bQ4VA53 1446 aaKnown RBP19.51■□□□□ 0.71
Col2a1-202ENSMUST00000088355 Polr3glQ8R0C0 218 aa19.44■□□□□ 0.7
Col2a1-202ENSMUST00000088355 Arhgap27A2AB59 869 aa19.41■□□□□ 0.7
Col2a1-202ENSMUST00000088355 Sall2Q9QX96 1004 aa19.39■□□□□ 0.69
Col2a1-202ENSMUST00000088355 Eea1Q8BL66 1411 aa19.35■□□□□ 0.69
Col2a1-202ENSMUST00000088355 4930567H17RikQ3V0K5 233 aa19.33■□□□□ 0.69
Col2a1-202ENSMUST00000088355 Myt1Q8CFC2 1127 aa19.29■□□□□ 0.68
Col2a1-202ENSMUST00000088355 Anp32aO35381 247 aa19.24■□□□□ 0.67
Col2a1-202ENSMUST00000088355 P3h3Q8CG70 732 aa19.24■□□□□ 0.67
Col2a1-202ENSMUST00000088355 Rtl5Q5DTT4 599 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms