RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Prpf8Q99PV0 2335 aaKnown RBP14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Dppa2Q9CWH0 301 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Tex48Q9DA81 110 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Gm26727M0QWT1 121 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Mapk1ip1Q9D7G9 263 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Tmem263Q9DAM7 115 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Gm5294J3QP53 216 aa14.45□□□□□ -0.1
Scaf11-201ENSMUST00000047835 P01793 123 aa14.44□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Nbl1Q61477 178 aa14.44□□□□□ -0.1
Scaf11-201ENSMUST00000047835 A230072I06RikQ3UUJ8 172 aa14.44□□□□□ -0.1
Scaf11-201ENSMUST00000047835 CadB2RQC6 2225 aa14.44□□□□□ -0.1
Scaf11-201ENSMUST00000047835 P06330 118 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Hoxb4P10284 250 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Cd24P24807 76 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Trav7-2Q5R1I3 112 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Pip4p1Q3TWL2 284 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Arfgef3Q3UGY8 2170 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Ighv8-2A0A0A6YW58 119 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Brd3osA0A1B0GRB6 84 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Defa1P11477 93 aa14.43□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Sec11aQ9R0P6 179 aa14.42□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Igkv4-62A0A0G2JDW9 117 aa14.42□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Bcl6bO88282 474 aa14.42□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Igkv3-9A0A140T8P4 119 aa14.42□□□□□ -0.1
Scaf11-201ENSMUST00000047835 P01896 185 aa14.42□□□□□ -0.1
Scaf11-201ENSMUST00000047835 PolP10400 120 aa14.42□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Trav9-2A0A075B647 113 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Trav9-4A0A0B4J1K2 113 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 P01739 132 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 UrahQ9CRB3 118 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Igkv8-34A0A0G2JDU0 121 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Timm10bQ9WV96 100 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Gm15217A2CG07 155 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Chchd5Q9CQP3 110 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 H2al1jA2BFR3 109 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 1500009C09RikD3YYW9 81 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 P04942 107 aa14.41□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Gm9949Q8C9F4 104 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Dkk4Q8VEJ3 221 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Cysrt1Q9D1E4 142 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Lamtor2Q9JHS3 125 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 PpbpQ9EQI5 113 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Parp4E9PYK3 1969 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Cox8bP48772 70 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Gm26558Q8BLW8 286 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 9130230L23RikQ8CC80 163 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Fam24aQ8CF27 98 aa14.4□□□□□ -0.1
Scaf11-201ENSMUST00000047835 Q8C708 225 aa14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Ighv1-50A0A075B5W1 117 aa14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm10188Q3V432 135 aa14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm29423A0A087WRM1 55 aa14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 9230109A22RikQ8BHE6 111 aa14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 4930447F04RikA2AFR2 126 aa14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Taf15Q8BQ46 557 aaKnown RBP14.39□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm45785A0A1B0GT05 94 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 CtsgP28293 261 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 9130213A22RikQ3V3T2 120 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15127B1AVZ5 449 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm5129F6YHA9 99 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Sdhaf1Q3U276 118 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Crybg1A0A0G2JG52 2065 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 FancmQ8BGE5 2021 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Prp2P05143 317 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 NpbQ8K4P1 119 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Vmn1r197Q8R265 298 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Card19Q9D1I2 183 aa14.38□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Sfta2E9PXB6 77 aa14.37□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Wipf2Q6PEV3 440 aa14.37□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Ighv1-52A0A0A6YXC3 117 aa14.37□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm17677B3GLJ5 116 aa14.37□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Nop10Q9CQS2 64 aa14.37□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Olfr984Q8VFN1 314 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15128A2ADW8 449 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15093A2BI72 449 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Luzp4B1AV09 449 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15107B1B0X0 449 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15097E9QA14 449 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Fhl1P97447 280 aaKnown RBP14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15085Q62012 449 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Zmat4Q8BZ94 229 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Gm15557A6PWY0 234 aa14.36□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Shisal2aA2A9G7 189 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Trav7d-3Q5R1I1 112 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 OpalinQ7M750 143 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Znf664Q4VA44 261 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 P01791 123 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 H2al1nQ497L1 109 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Foxi1Q922I5 372 aa14.35□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Slc25a48Q8BW66 306 aa14.34□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Them7Q9DCP4 223 aa14.34□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Wdr90Q6ZPG2 1874 aa14.34□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Foxi3E0CZH3 425 aa14.34□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Abca4O35600 2310 aa14.33□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Igkv4-68A0A0B4J1I7 117 aa14.33□□□□□ -0.11
Scaf11-201ENSMUST00000047835 A930003A15RikQ3U552 87 aa14.33□□□□□ -0.11
Scaf11-201ENSMUST00000047835 Hbb-bsA8DUK4 147 aa14.33□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Hbb-b1P02088 147 aa14.33□□□□□ -0.12
Scaf11-201ENSMUST00000047835 CckP09240 115 aa14.33□□□□□ -0.12
Scaf11-201ENSMUST00000047835 P01750 117 aa14.33□□□□□ -0.12
Scaf11-201ENSMUST00000047835 Hist2h2beQ64524 126 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 70.9 ms