RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Rhox8Q6VSS7 320 aa33,37■■■□□ 2,93
Scaf11-201ENSMUST00000047835 Ccdc136Q3TVA9 1136 aa29,84■■■□□ 2,37
Scaf11-201ENSMUST00000047835 Ehmt2Q9Z148 1263 aaKnown RBP29,72■■■□□ 2,35
Scaf11-201ENSMUST00000047835 NischQ80TM9 1593 aa29,61■■■□□ 2,33
Scaf11-201ENSMUST00000047835 Esf1Q3V1V3 845 aaKnown RBP29,58■■■□□ 2,33
Scaf11-201ENSMUST00000047835 Cngb1E1AZ71 1325 aa29,52■■■□□ 2,32
Scaf11-201ENSMUST00000047835 Gab3Q8BSM5 595 aa29,07■■■□□ 2,24
Scaf11-201ENSMUST00000047835 Rpgrip1Q9EPQ2 1331 aa28,97■■■□□ 2,23
Scaf11-201ENSMUST00000047835 Trim41Q5NCC3 630 aa28,93■■■□□ 2,22
Scaf11-201ENSMUST00000047835 Zeb1Q64318 1117 aa28,91■■■□□ 2,22
Scaf11-201ENSMUST00000047835 Npm2Q80W85 207 aa28,79■■■□□ 2,2
Scaf11-201ENSMUST00000047835 Ube2uB1AUC4 352 aa28,69■■■□□ 2,18
Scaf11-201ENSMUST00000047835 Myt1lP97500 1187 aa28,6■■■□□ 2,17
Scaf11-201ENSMUST00000047835 Wdr66E9Q743 1299 aa28,5■■■□□ 2,15
Scaf11-201ENSMUST00000047835 Las1lA2BE28 776 aaKnown RBP28,39■■■□□ 2,14
Scaf11-201ENSMUST00000047835 Abcc9P70170 1546 aa28,05■■■□□ 2,08
Scaf11-201ENSMUST00000047835 Il27Q8K3I6 234 aa27,94■■■□□ 2,06
Scaf11-201ENSMUST00000047835 UbtfP25976 765 aaKnown RBP27,82■■■□□ 2,04
Scaf11-201ENSMUST00000047835 Gm35339A0A140LHH9 1649 aa27,79■■■□□ 2,04
Scaf11-201ENSMUST00000047835 Zcchc6Q5BLK4 1491 aaKnown RBP27,69■■■□□ 2,02
Scaf11-201ENSMUST00000047835 Ccdc180J3QNE4 1664 aa27,38■■□□□ 1,97
Scaf11-201ENSMUST00000047835 Ap3b1Q9Z1T1 1105 aa27,35■■□□□ 1,97
Scaf11-201ENSMUST00000047835 Acin1Q9JIX8 1338 aaKnown RBP27,35■■□□□ 1,97
Scaf11-201ENSMUST00000047835 HrcG5E8J6 738 aa27,31■■□□□ 1,96
Scaf11-201ENSMUST00000047835 NefmP08553 848 aa27,24■■□□□ 1,95
Scaf11-201ENSMUST00000047835 Slc24a1Q91WD8 1130 aa27,11■■□□□ 1,93
Scaf11-201ENSMUST00000047835 Fam50aQ9WV03 339 aaKnown RBP27,05■■□□□ 1,92
Scaf11-201ENSMUST00000047835 Rtl1Q7M732 1744 aa27,03■■□□□ 1,92
Scaf11-201ENSMUST00000047835 Abcc8B2RUS7 1588 aa27■■□□□ 1,91
Scaf11-201ENSMUST00000047835 Pelp1Q9DBD5 1123 aaKnown RBP26,99■■□□□ 1,91
Scaf11-201ENSMUST00000047835 Neurod1Q60867 357 aa26,87■■□□□ 1,89
Scaf11-201ENSMUST00000047835 Npm1Q61937 292 aaKnown RBP26,74■■□□□ 1,87
Scaf11-201ENSMUST00000047835 Stra8P70278 393 aa26,67■■□□□ 1,86
Scaf11-201ENSMUST00000047835 Ppargc1bQ8VHJ7 1014 aa26,62■■□□□ 1,85
Scaf11-201ENSMUST00000047835 NclP09405 707 aaKnown RBP26,62■■□□□ 1,85
Scaf11-201ENSMUST00000047835 Os9Q8K2C7 672 aa26,61■■□□□ 1,85
Scaf11-201ENSMUST00000047835 Lmod2Q3UHZ5 550 aa26,54■■□□□ 1,84
Scaf11-201ENSMUST00000047835 Zbtb7cQ8VCZ7 619 aa26,5■■□□□ 1,83
Scaf11-201ENSMUST00000047835 Ifnlr1Q8CGK5 535 aa26,44■■□□□ 1,82
Scaf11-201ENSMUST00000047835 Plekhg3Q4VAC9 1341 aa26,39■■□□□ 1,82
Scaf11-201ENSMUST00000047835 CenpbP27790 599 aa26,38■■□□□ 1,81
Scaf11-201ENSMUST00000047835 Cdk11bP24788 784 aaKnown RBP26,37■■□□□ 1,81
Scaf11-201ENSMUST00000047835 NrdcQ8BHG1 1161 aa26,36■■□□□ 1,81
Scaf11-201ENSMUST00000047835 Mier1Q5UAK0 511 aa26,32■■□□□ 1,8
Scaf11-201ENSMUST00000047835 Anp32bQ9EST5 272 aaKnown RBP26,3■■□□□ 1,8
Scaf11-201ENSMUST00000047835 TonslQ6NZL6 1363 aa26,29■■□□□ 1,8
Scaf11-201ENSMUST00000047835 Pcgf6Q99NA9 353 aa26,24■■□□□ 1,79
Scaf11-201ENSMUST00000047835 Hnrnpul2Q00PI9 745 aaKnown RBP26,22■■□□□ 1,79
Scaf11-201ENSMUST00000047835 Eif5bQ05D44 1216 aaKnown RBP26,21■■□□□ 1,79
Scaf11-201ENSMUST00000047835 Brd4Q9ESU6 1400 aaKnown RBP26,16■■□□□ 1,78
Scaf11-201ENSMUST00000047835 Nop58Q6DFW4 536 aaKnown RBP26,14■■□□□ 1,78
Scaf11-201ENSMUST00000047835 Fkbp15Q6P9Q6 1216 aaKnown RBP26,12■■□□□ 1,77
Scaf11-201ENSMUST00000047835 Rb1cc1Q9ESK9 1588 aa26,09■■□□□ 1,77
Scaf11-201ENSMUST00000047835 Chic1Q8CBW7 227 aa26,07■■□□□ 1,76
Scaf11-201ENSMUST00000047835 Ubl4bQ9CQ84 188 aa26,07■■□□□ 1,76
Scaf11-201ENSMUST00000047835 Gm13697A2AK42 830 aa26,05■■□□□ 1,76
Scaf11-201ENSMUST00000047835 Supt5hO55201 1082 aaKnown RBP26,04■■□□□ 1,76
Scaf11-201ENSMUST00000047835 Zbtb4Q5F293 982 aa25,97■■□□□ 1,75
Scaf11-201ENSMUST00000047835 Erich6D3Z6S9 713 aa25,94■■□□□ 1,74
Scaf11-201ENSMUST00000047835 NeflP08551 543 aa25,91■■□□□ 1,74
Scaf11-201ENSMUST00000047835 Amer1Q7TS75 1132 aa25,9■■□□□ 1,74
Scaf11-201ENSMUST00000047835 Clip1Q922J3 1391 aa25,84■■□□□ 1,73
Scaf11-201ENSMUST00000047835 Atp1b4Q99ME6 356 aa25,82■■□□□ 1,72
Scaf11-201ENSMUST00000047835 Plppr3Q7TPB0 716 aa25,81■■□□□ 1,72
Scaf11-201ENSMUST00000047835 Tnnt3Q9QZ47 272 aa25,81■■□□□ 1,72
Scaf11-201ENSMUST00000047835 Eid3Q3V124 375 aa25,8■■□□□ 1,72
Scaf11-201ENSMUST00000047835 Dcaf1Q80TR8 1506 aa25,78■■□□□ 1,72
Scaf11-201ENSMUST00000047835 Mapk8ip2Q9ERE9 830 aa25,72■■□□□ 1,71
Scaf11-201ENSMUST00000047835 NacadQ5SWP3 1504 aa25,71■■□□□ 1,71
Scaf11-201ENSMUST00000047835 Prdm10Q3UTQ7 1184 aa25,71■■□□□ 1,71
Scaf11-201ENSMUST00000047835 Cep164Q5DU05 1446 aa25,67■■□□□ 1,7
Scaf11-201ENSMUST00000047835 Ttbk1Q6PCN3 1308 aa25,62■■□□□ 1,69
Scaf11-201ENSMUST00000047835 Gm13695A2AK44 830 aa25,57■■□□□ 1,68
Scaf11-201ENSMUST00000047835 Chic2Q9D9G3 165 aa25,53■■□□□ 1,68
Scaf11-201ENSMUST00000047835 ClspnQ80YR7 1315 aa25,51■■□□□ 1,67
Scaf11-201ENSMUST00000047835 Nlrp6Q91WS2 869 aa25,47■■□□□ 1,67
Scaf11-201ENSMUST00000047835 4933416C03RikQ3V063 378 aa25,39■■□□□ 1,66
Scaf11-201ENSMUST00000047835 Kif15Q6P9L6 1387 aa25,37■■□□□ 1,65
Scaf11-201ENSMUST00000047835 BlmO88700 1416 aa25,36■■□□□ 1,65
Scaf11-201ENSMUST00000047835 Baz1aO88379 1555 aa25,36■■□□□ 1,65
Scaf11-201ENSMUST00000047835 Polr3glQ8R0C0 218 aa25,29■■□□□ 1,64
Scaf11-201ENSMUST00000047835 Hdac5Q9Z2V6 1113 aa25,27■■□□□ 1,64
Scaf11-201ENSMUST00000047835 Rsf1E9PWW9 1441 aaKnown RBP25,25■■□□□ 1,63
Scaf11-201ENSMUST00000047835 Ercc6F8VPZ5 1481 aa25,23■■□□□ 1,63
Scaf11-201ENSMUST00000047835 Setd5Q5XJV7 1441 aa25,22■■□□□ 1,63
Scaf11-201ENSMUST00000047835 Ccer2J3QPU5 274 aa25,2■■□□□ 1,62
Scaf11-201ENSMUST00000047835 Kdm5dQ62240 1548 aa25,17■■□□□ 1,62
Scaf11-201ENSMUST00000047835 Golga3P55937 1487 aa25,17■■□□□ 1,62
Scaf11-201ENSMUST00000047835 Sall2Q9QX96 1004 aa25,16■■□□□ 1,62
Scaf11-201ENSMUST00000047835 Safb2Q80YR5 991 aaKnown RBP25,12■■□□□ 1,61
Scaf11-201ENSMUST00000047835 Arhgap27A2AB59 869 aa25,08■■□□□ 1,61
Scaf11-201ENSMUST00000047835 Ccdc18Q640L5 1455 aa25,03■■□□□ 1,6
Scaf11-201ENSMUST00000047835 Rangap1P46061 589 aaKnown RBP25,02■■□□□ 1,6
Scaf11-201ENSMUST00000047835 P3h3Q8CG70 732 aa25■■□□□ 1,59
Scaf11-201ENSMUST00000047835 Clstn2Q9ER65 966 aa24,99■■□□□ 1,59
Scaf11-201ENSMUST00000047835 Csrnp3P59055 597 aa24,98■■□□□ 1,59
Scaf11-201ENSMUST00000047835 Gm38655A0A286YDK6 273 aa24,91■■□□□ 1,58
Scaf11-201ENSMUST00000047835 Rad21Q61550 635 aaKnown RBP24,91■■□□□ 1,58
Scaf11-201ENSMUST00000047835 Rgl3Q3UYI5 709 aa24,91■■□□□ 1,58
Scaf11-201ENSMUST00000047835 ArxO35085 564 aa24,85■■□□□ 1,57
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms