RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Rhox8Q6VSS7 320 aa33.37■■■□□ 2.93
Scaf11-201ENSMUST00000047835 Ccdc136Q3TVA9 1136 aa29.84■■■□□ 2.37
Scaf11-201ENSMUST00000047835 Ehmt2Q9Z148 1263 aaKnown RBP29.72■■■□□ 2.35
Scaf11-201ENSMUST00000047835 NischQ80TM9 1593 aa29.61■■■□□ 2.33
Scaf11-201ENSMUST00000047835 Esf1Q3V1V3 845 aaKnown RBP29.58■■■□□ 2.33
Scaf11-201ENSMUST00000047835 Cngb1E1AZ71 1325 aa29.52■■■□□ 2.32
Scaf11-201ENSMUST00000047835 Gab3Q8BSM5 595 aa29.07■■■□□ 2.24
Scaf11-201ENSMUST00000047835 Rpgrip1Q9EPQ2 1331 aa28.97■■■□□ 2.23
Scaf11-201ENSMUST00000047835 Trim41Q5NCC3 630 aa28.93■■■□□ 2.22
Scaf11-201ENSMUST00000047835 Zeb1Q64318 1117 aa28.91■■■□□ 2.22
Scaf11-201ENSMUST00000047835 Npm2Q80W85 207 aa28.79■■■□□ 2.2
Scaf11-201ENSMUST00000047835 Ube2uB1AUC4 352 aa28.69■■■□□ 2.18
Scaf11-201ENSMUST00000047835 Myt1lP97500 1187 aa28.6■■■□□ 2.17
Scaf11-201ENSMUST00000047835 Wdr66E9Q743 1299 aa28.5■■■□□ 2.15
Scaf11-201ENSMUST00000047835 Las1lA2BE28 776 aaKnown RBP28.39■■■□□ 2.14
Scaf11-201ENSMUST00000047835 Abcc9P70170 1546 aa28.05■■■□□ 2.08
Scaf11-201ENSMUST00000047835 Il27Q8K3I6 234 aa27.94■■■□□ 2.06
Scaf11-201ENSMUST00000047835 UbtfP25976 765 aaKnown RBP27.82■■■□□ 2.04
Scaf11-201ENSMUST00000047835 Gm35339A0A140LHH9 1649 aa27.79■■■□□ 2.04
Scaf11-201ENSMUST00000047835 Zcchc6Q5BLK4 1491 aaKnown RBP27.69■■■□□ 2.02
Scaf11-201ENSMUST00000047835 Ccdc180J3QNE4 1664 aa27.38■■□□□ 1.97
Scaf11-201ENSMUST00000047835 Ap3b1Q9Z1T1 1105 aa27.35■■□□□ 1.97
Scaf11-201ENSMUST00000047835 Acin1Q9JIX8 1338 aaKnown RBP27.35■■□□□ 1.97
Scaf11-201ENSMUST00000047835 HrcG5E8J6 738 aa27.31■■□□□ 1.96
Scaf11-201ENSMUST00000047835 NefmP08553 848 aa27.24■■□□□ 1.95
Scaf11-201ENSMUST00000047835 Slc24a1Q91WD8 1130 aa27.11■■□□□ 1.93
Scaf11-201ENSMUST00000047835 Fam50aQ9WV03 339 aaKnown RBP27.05■■□□□ 1.92
Scaf11-201ENSMUST00000047835 Rtl1Q7M732 1744 aa27.03■■□□□ 1.92
Scaf11-201ENSMUST00000047835 Abcc8B2RUS7 1588 aa27■■□□□ 1.91
Scaf11-201ENSMUST00000047835 Pelp1Q9DBD5 1123 aaKnown RBP26.99■■□□□ 1.91
Scaf11-201ENSMUST00000047835 Neurod1Q60867 357 aa26.87■■□□□ 1.89
Scaf11-201ENSMUST00000047835 Npm1Q61937 292 aaKnown RBP26.74■■□□□ 1.87
Scaf11-201ENSMUST00000047835 Stra8P70278 393 aa26.67■■□□□ 1.86
Scaf11-201ENSMUST00000047835 Ppargc1bQ8VHJ7 1014 aa26.62■■□□□ 1.85
Scaf11-201ENSMUST00000047835 NclP09405 707 aaKnown RBP26.62■■□□□ 1.85
Scaf11-201ENSMUST00000047835 Os9Q8K2C7 672 aa26.61■■□□□ 1.85
Scaf11-201ENSMUST00000047835 Lmod2Q3UHZ5 550 aa26.54■■□□□ 1.84
Scaf11-201ENSMUST00000047835 Zbtb7cQ8VCZ7 619 aa26.5■■□□□ 1.83
Scaf11-201ENSMUST00000047835 Ifnlr1Q8CGK5 535 aa26.44■■□□□ 1.82
Scaf11-201ENSMUST00000047835 Plekhg3Q4VAC9 1341 aa26.39■■□□□ 1.82
Scaf11-201ENSMUST00000047835 CenpbP27790 599 aa26.38■■□□□ 1.81
Scaf11-201ENSMUST00000047835 Cdk11bP24788 784 aaKnown RBP26.37■■□□□ 1.81
Scaf11-201ENSMUST00000047835 NrdcQ8BHG1 1161 aa26.36■■□□□ 1.81
Scaf11-201ENSMUST00000047835 Mier1Q5UAK0 511 aa26.32■■□□□ 1.8
Scaf11-201ENSMUST00000047835 Anp32bQ9EST5 272 aaKnown RBP26.3■■□□□ 1.8
Scaf11-201ENSMUST00000047835 TonslQ6NZL6 1363 aa26.29■■□□□ 1.8
Scaf11-201ENSMUST00000047835 Pcgf6Q99NA9 353 aa26.24■■□□□ 1.79
Scaf11-201ENSMUST00000047835 Hnrnpul2Q00PI9 745 aaKnown RBP26.22■■□□□ 1.79
Scaf11-201ENSMUST00000047835 Eif5bQ05D44 1216 aaKnown RBP26.21■■□□□ 1.79
Scaf11-201ENSMUST00000047835 Brd4Q9ESU6 1400 aaKnown RBP26.16■■□□□ 1.78
Scaf11-201ENSMUST00000047835 Nop58Q6DFW4 536 aaKnown RBP26.14■■□□□ 1.78
Scaf11-201ENSMUST00000047835 Fkbp15Q6P9Q6 1216 aaKnown RBP26.12■■□□□ 1.77
Scaf11-201ENSMUST00000047835 Rb1cc1Q9ESK9 1588 aa26.09■■□□□ 1.77
Scaf11-201ENSMUST00000047835 Chic1Q8CBW7 227 aa26.07■■□□□ 1.76
Scaf11-201ENSMUST00000047835 Ubl4bQ9CQ84 188 aa26.07■■□□□ 1.76
Scaf11-201ENSMUST00000047835 Gm13697A2AK42 830 aa26.05■■□□□ 1.76
Scaf11-201ENSMUST00000047835 Supt5hO55201 1082 aaKnown RBP26.04■■□□□ 1.76
Scaf11-201ENSMUST00000047835 Zbtb4Q5F293 982 aa25.97■■□□□ 1.75
Scaf11-201ENSMUST00000047835 Erich6D3Z6S9 713 aa25.94■■□□□ 1.74
Scaf11-201ENSMUST00000047835 NeflP08551 543 aa25.91■■□□□ 1.74
Scaf11-201ENSMUST00000047835 Amer1Q7TS75 1132 aa25.9■■□□□ 1.74
Scaf11-201ENSMUST00000047835 Clip1Q922J3 1391 aa25.84■■□□□ 1.73
Scaf11-201ENSMUST00000047835 Atp1b4Q99ME6 356 aa25.82■■□□□ 1.72
Scaf11-201ENSMUST00000047835 Plppr3Q7TPB0 716 aa25.81■■□□□ 1.72
Scaf11-201ENSMUST00000047835 Tnnt3Q9QZ47 272 aa25.81■■□□□ 1.72
Scaf11-201ENSMUST00000047835 Eid3Q3V124 375 aa25.8■■□□□ 1.72
Scaf11-201ENSMUST00000047835 Dcaf1Q80TR8 1506 aa25.78■■□□□ 1.72
Scaf11-201ENSMUST00000047835 Mapk8ip2Q9ERE9 830 aa25.72■■□□□ 1.71
Scaf11-201ENSMUST00000047835 NacadQ5SWP3 1504 aa25.71■■□□□ 1.71
Scaf11-201ENSMUST00000047835 Prdm10Q3UTQ7 1184 aa25.71■■□□□ 1.71
Scaf11-201ENSMUST00000047835 Cep164Q5DU05 1446 aa25.67■■□□□ 1.7
Scaf11-201ENSMUST00000047835 Ttbk1Q6PCN3 1308 aa25.62■■□□□ 1.69
Scaf11-201ENSMUST00000047835 Gm13695A2AK44 830 aa25.57■■□□□ 1.68
Scaf11-201ENSMUST00000047835 Chic2Q9D9G3 165 aa25.53■■□□□ 1.68
Scaf11-201ENSMUST00000047835 ClspnQ80YR7 1315 aa25.51■■□□□ 1.67
Scaf11-201ENSMUST00000047835 Nlrp6Q91WS2 869 aa25.47■■□□□ 1.67
Scaf11-201ENSMUST00000047835 4933416C03RikQ3V063 378 aa25.39■■□□□ 1.66
Scaf11-201ENSMUST00000047835 Kif15Q6P9L6 1387 aa25.37■■□□□ 1.65
Scaf11-201ENSMUST00000047835 BlmO88700 1416 aa25.36■■□□□ 1.65
Scaf11-201ENSMUST00000047835 Baz1aO88379 1555 aa25.36■■□□□ 1.65
Scaf11-201ENSMUST00000047835 Polr3glQ8R0C0 218 aa25.29■■□□□ 1.64
Scaf11-201ENSMUST00000047835 Hdac5Q9Z2V6 1113 aa25.27■■□□□ 1.64
Scaf11-201ENSMUST00000047835 Rsf1E9PWW9 1441 aaKnown RBP25.25■■□□□ 1.63
Scaf11-201ENSMUST00000047835 Ercc6F8VPZ5 1481 aa25.23■■□□□ 1.63
Scaf11-201ENSMUST00000047835 Setd5Q5XJV7 1441 aa25.22■■□□□ 1.63
Scaf11-201ENSMUST00000047835 Ccer2J3QPU5 274 aa25.2■■□□□ 1.62
Scaf11-201ENSMUST00000047835 Kdm5dQ62240 1548 aa25.17■■□□□ 1.62
Scaf11-201ENSMUST00000047835 Golga3P55937 1487 aa25.17■■□□□ 1.62
Scaf11-201ENSMUST00000047835 Sall2Q9QX96 1004 aa25.16■■□□□ 1.62
Scaf11-201ENSMUST00000047835 Safb2Q80YR5 991 aaKnown RBP25.12■■□□□ 1.61
Scaf11-201ENSMUST00000047835 Arhgap27A2AB59 869 aa25.08■■□□□ 1.61
Scaf11-201ENSMUST00000047835 Ccdc18Q640L5 1455 aa25.03■■□□□ 1.6
Scaf11-201ENSMUST00000047835 Rangap1P46061 589 aaKnown RBP25.02■■□□□ 1.6
Scaf11-201ENSMUST00000047835 P3h3Q8CG70 732 aa25■■□□□ 1.59
Scaf11-201ENSMUST00000047835 Clstn2Q9ER65 966 aa24.99■■□□□ 1.59
Scaf11-201ENSMUST00000047835 Csrnp3P59055 597 aa24.98■■□□□ 1.59
Scaf11-201ENSMUST00000047835 Gm38655A0A286YDK6 273 aa24.91■■□□□ 1.58
Scaf11-201ENSMUST00000047835 Rad21Q61550 635 aaKnown RBP24.91■■□□□ 1.58
Scaf11-201ENSMUST00000047835 Rgl3Q3UYI5 709 aa24.91■■□□□ 1.58
Scaf11-201ENSMUST00000047835 ArxO35085 564 aa24.85■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms