RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 9230109A22RikQ8BHE6 111 aa8.09□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Hint1P70349 126 aaKnown RBP8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Taf15Q8BQ46 557 aaKnown RBP8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 8030423J24RikQ9CX45 142 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Jmjd1cQ69ZK6 2350 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ighv3-8A0A075B5T0 131 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Iglv1A0A075B663 117 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Erdr1J3QMM0 206 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Zcwpw2Q08EN7 125 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Tal2Q62282 108 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Shisal2aA2A9G7 189 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Map6d1Q14BB9 191 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm5468Q8C3D3 155 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Anapc13Q8R034 74 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Trav7d-3Q5R1I1 112 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Prss58Q8BW11 241 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 TdhQ8K3F7 373 aa8.08□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ang5Q5GAN1 145 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 LbhQ9CX60 105 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Igkv4-81A0A0G2JEY5 119 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gp9O88186 177 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 SbpP15501 199 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm21060J3KMU4 56 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Wfdc9Q3UW41 83 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Tm4sf20Q9CQY8 226 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 4930442H23RikQ9D5G7 103 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gemin7Q9CWY4 129 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Lyzl4Q9D925 145 aa8.07□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Dock10Q8BZN6 2150 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm11444F6QMA6 170 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Cdk2ap2Q9CPY4 127 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ighv1-50A0A075B5W1 117 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ighv1-49A0A0A6YWX2 117 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01786 117 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 H1fxQ80ZM5 188 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Tm2d1Q99MB3 208 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ifitm1Q9D103 106 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Pgpep1Q9ESW8 209 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Pcnx1Q9QYC1 2344 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Zfp407G3UVV3 2246 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01728 117 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Spink1P09036 80 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Sdhaf1Q3U276 118 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Shisa9Q9CZN4 424 aa8.06□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Wdr90Q6ZPG2 1874 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Trav6-6A0A075B603 114 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Trav4n-4A0A075B615 110 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm45213A0A0U1RNZ6 101 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 IgipA0A1B0GR74 53 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01739 132 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 MdfiP70331 251 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Trav6n-6A0A075B6B2 114 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01674 108 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm26558Q8BLW8 286 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm9961Q8BNV2 113 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 SNORCQ9CXL7 121 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ramp1Q9WTJ5 148 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Fer1l4A3KGK3 1992 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Defb26Q30KN7 186 aa8.05□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Brd3osA0A1B0GRB6 84 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Cox17P56394 63 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Fxyd7P59648 80 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Trav7-2Q5R1I3 112 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ccl24Q9JKC0 119 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Armcx4E9PWM3 2356 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Tcf20Q9EPQ8 1987 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ighv1-52A0A0A6YXC3 117 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01748 117 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm9958Q8C9U4 106 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Bub3Q9WVA3 326 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Obox8V9GWY9 217 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Tcl1b4P56844 120 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Synj2bpQ9D6K5 145 aa8.04□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Tomm7Q9D173 55 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Ube2e2Q91W82 201 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Col4a4Q9QZR9 1682 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01811 117 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Olfr312Q7TRZ9 308 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 TirapQ99JY1 241 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01791 123 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Igll1P20764 209 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Klf13Q9JJZ6 289 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Hivep3A2A884 2348 aa8.03□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 FancmQ8BGE5 2021 aa8.02□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Rpl35aO55142 110 aa8.02□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 P01750 117 aa8.02□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Cks1bP61025 79 aa8.02□□□□□ -1.12
Ccdc40-201ENSMUST00000035935 Gm867A0A1W2P7T4 151 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Gm21370Q3T9V6 190 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Q8R092 253 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 CckP09240 115 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 P01738 130 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Zfand3Q497H0 227 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Nbl1Q61477 178 aa8.02□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 P06330 118 aa8.01□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 D130052B06RikQ3UW13 202 aa8.01□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Tmem86bQ497J1 226 aa8.01□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Znf672Q99LH4 468 aa8.01□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Oxld1Q9CR10 201 aa8.01□□□□□ -1.13
Ccdc40-201ENSMUST00000035935 Fam208bQ5DTT3 2382 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 130.3 ms