RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Scn5aQ9JJV9 2019 aa10.07□□□□□ -0.8
Ncan-201ENSMUST00000002412 Igkv3-10A0A0G2JGN0 119 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Tomm6Q9CQN3 74 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 P06330 118 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Q9CQM1 111 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Gm27027S4R1M6 97 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Dock9Q8BIK4 2055 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Atp6v0e1Q9CQD8 81 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 GgnQ80WJ1 673 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Slc25a29Q8BL03 306 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Myo16Q5DU14 1919 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Trav4n-4A0A075B615 110 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ighv1-18A0A0A6YXN4 117 aa10.06□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ighv3-4A0A0A6YXF1 117 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Cxcl13O55038 109 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Cxcl10P17515 98 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Lypd8Q9D7S0 255 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Rpp25lQ99JH1 163 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Exph5Q0VAV2 1960 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ighv1-36A0A0A6YXT2 117 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ighv1-31A0A0A6YWK5 117 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Foxi2Q3I5G5 311 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Igkv3-3A0A140T8Q0 119 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Lst1O08843 95 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ndufa4Q62425 82 aaKnown RBP10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 F8Q06194 2319 aa10.05□□□□□ -0.8
Ncan-201ENSMUST00000002412 AngP21570 145 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 March3Q8BRX9 218 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 Tax1bp3Q9DBG9 124 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 Lypd1Q8BLC3 141 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 Wdr86D3Z757 380 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 OdaphJ3QNT8 126 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ang4Q3TMQ6 144 aa10.04□□□□□ -0.8
Ncan-201ENSMUST00000002412 Ralgapa1Q6GYP7 2035 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Rnf5O35445 180 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Gm43517E9PYS1 339 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Gm10912Q3UXH0 145 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Frem3Q5H8B9 2123 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 SprnQ8BWU1 147 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Trav11A0A0B4J1J9 114 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Zfp11P10751 647 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Lyrm9Q3UN90 78 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Trav9d-3A0A075B695 113 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Trav13n-1A0A0G2JEU8 110 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 P01786 117 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Pou2af1Q64693 256 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 BC049762Q8C601 163 aa10.03□□□□□ -0.8
Ncan-201ENSMUST00000002412 Greb1lB9EJV3 1913 aa10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 C920008G01RikA0A0B4J1N1 112 aa10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 ColqO35348 457 aa10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 Rpl18aP62717 176 aaKnown RBP10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 A930003A15RikQ3U552 87 aa10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 Olfr311Q5NC59 308 aa10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 Nop10Q9CQS2 64 aa10.02□□□□□ -0.8
Ncan-201ENSMUST00000002412 Mrps12O35680 139 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 RtbdnQ8QZY4 247 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Trbv13-1A0A0B4J1P8 112 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Ndufb4Q9CQC7 129 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gpr179E9PY61 2293 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Trav13-2A0A075B649 110 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Igkv1-117A0A140T8M0 119 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 PoleQ9WVF7 2283 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Ube2e1P52482 193 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Trav13-1A0A075B644 110 aa10.02□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gm19410A0A140LJC7 2098 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gm11733Q8BQP1 125 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Fer1l5P0DM40 2038 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 B230359F08RikA0A0B4J1K3 109 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 P18528 98 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Col11a2Q64739 1736 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gm6034E9Q101 117 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Glrp1E9Q9S8 174 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Igf1P05017 153 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Vpreb1P13372 142 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Psmb11Q8BG41 302 aa10.01□□□□□ -0.81
Ncan-201ENSMUST00000002412 Trav13d-1A0A075B606 110 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Folr2Q05685 251 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 4930442H23RikQ9D5G7 103 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Fxyd1Q9Z239 92 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gm10518F6UQQ9 182 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Fgf6P21658 208 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Trav13d-4A0A0G2JFX3 110 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gm10384Q3UQ87 92 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Gm33815A0A087WNV3 176 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 MylkQ6PDN3 1941 aaKnown RBP10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Igkv3-4A0A140T8Q4 119 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Esm1Q9QYY7 184 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Rbbp6P97868 1790 aaKnown RBP10□□□□□ -0.81
Ncan-201ENSMUST00000002412 P01837 106 aa10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Ahctf1Q8CJF7 2243 aaKnown RBP10□□□□□ -0.81
Ncan-201ENSMUST00000002412 Trav9n-4A0A075B631 113 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Reg3gO09049 174 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Atp5g1Q9CR84 136 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 RhohQ9D3G9 191 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 H2al1kJ3QP08 105 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Cdkn2aQ64364 169 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Nxph4G3X9N5 304 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Ppp1r32Q148A4 427 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Pnrc2Q9CR73 140 aa9.99□□□□□ -0.81
Ncan-201ENSMUST00000002412 Ly6c1P0CW02 131 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms