RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Rhox8Q6VSS7 320 aa21.49■■□□□ 1.03
Ncan-201ENSMUST00000002412 Ehmt2Q9Z148 1263 aaKnown RBP20.62■□□□□ 0.89
Ncan-201ENSMUST00000002412 Amer1Q7TS75 1132 aa20.5■□□□□ 0.87
Ncan-201ENSMUST00000002412 Cngb1E1AZ71 1325 aa20.5■□□□□ 0.87
Ncan-201ENSMUST00000002412 Las1lA2BE28 776 aaKnown RBP20.41■□□□□ 0.86
Ncan-201ENSMUST00000002412 Pelp1Q9DBD5 1123 aaKnown RBP20.3■□□□□ 0.84
Ncan-201ENSMUST00000002412 Wdr66E9Q743 1299 aa20.17■□□□□ 0.82
Ncan-201ENSMUST00000002412 Rpgrip1Q9EPQ2 1331 aa20.14■□□□□ 0.82
Ncan-201ENSMUST00000002412 Zeb1Q64318 1117 aa19.85■□□□□ 0.77
Ncan-201ENSMUST00000002412 Ttbk1Q6PCN3 1308 aa19.67■□□□□ 0.74
Ncan-201ENSMUST00000002412 Ube2uB1AUC4 352 aa19.64■□□□□ 0.73
Ncan-201ENSMUST00000002412 4930567H17RikQ3V0K5 233 aa19.49■□□□□ 0.71
Ncan-201ENSMUST00000002412 CenpbP27790 599 aa19.45■□□□□ 0.7
Ncan-201ENSMUST00000002412 Slc24a1Q91WD8 1130 aa19.24■□□□□ 0.67
Ncan-201ENSMUST00000002412 4933416C03RikQ3V063 378 aa19.15■□□□□ 0.66
Ncan-201ENSMUST00000002412 Gab3Q8BSM5 595 aa18.99■□□□□ 0.63
Ncan-201ENSMUST00000002412 Ccdc136Q3TVA9 1136 aa18.81■□□□□ 0.6
Ncan-201ENSMUST00000002412 Myt1Q8CFC2 1127 aa18.79■□□□□ 0.6
Ncan-201ENSMUST00000002412 Esf1Q3V1V3 845 aaKnown RBP18.76■□□□□ 0.59
Ncan-201ENSMUST00000002412 Myt1lP97500 1187 aa18.72■□□□□ 0.59
Ncan-201ENSMUST00000002412 Npm2Q80W85 207 aa18.67■□□□□ 0.58
Ncan-201ENSMUST00000002412 Eif5bQ05D44 1216 aaKnown RBP18.56■□□□□ 0.56
Ncan-201ENSMUST00000002412 Stra8P70278 393 aa18.56■□□□□ 0.56
Ncan-201ENSMUST00000002412 UbtfP25976 765 aaKnown RBP18.48■□□□□ 0.55
Ncan-201ENSMUST00000002412 Ppargc1bQ8VHJ7 1014 aa18.46■□□□□ 0.55
Ncan-201ENSMUST00000002412 DiexfQ8BTT6 772 aaKnown RBP18.44■□□□□ 0.54
Ncan-201ENSMUST00000002412 Acin1Q9JIX8 1338 aaKnown RBP18.43■□□□□ 0.54
Ncan-201ENSMUST00000002412 Cdk11bP24788 784 aaKnown RBP18.41■□□□□ 0.54
Ncan-201ENSMUST00000002412 NeflP08551 543 aa18.27■□□□□ 0.51
Ncan-201ENSMUST00000002412 Neurod1Q60867 357 aa18.2■□□□□ 0.5
Ncan-201ENSMUST00000002412 HrcG5E8J6 738 aa18.2■□□□□ 0.5
Ncan-201ENSMUST00000002412 Pcgf6Q99NA9 353 aa18.18■□□□□ 0.5
Ncan-201ENSMUST00000002412 NrdcQ8BHG1 1161 aa18.18■□□□□ 0.5
Ncan-201ENSMUST00000002412 NefmP08553 848 aa18.16■□□□□ 0.5
Ncan-201ENSMUST00000002412 Trim41Q5NCC3 630 aa18.15■□□□□ 0.5
Ncan-201ENSMUST00000002412 DaxxO35613 739 aa18.13■□□□□ 0.49
Ncan-201ENSMUST00000002412 Nop58Q6DFW4 536 aaKnown RBP18.11■□□□□ 0.49
Ncan-201ENSMUST00000002412 Ythdc1E9Q5K9 736 aaKnown RBP18.06■□□□□ 0.48
Ncan-201ENSMUST00000002412 Tnnt3Q9QZ47 272 aa18.03■□□□□ 0.48
Ncan-201ENSMUST00000002412 CatipB9EKE5 520 aa18.01■□□□□ 0.47
Ncan-201ENSMUST00000002412 ArxO35085 564 aa17.97■□□□□ 0.47
Ncan-201ENSMUST00000002412 Lmod3E9QA62 571 aa17.95■□□□□ 0.46
Ncan-201ENSMUST00000002412 Gm38655A0A286YDK6 273 aa17.94■□□□□ 0.46
Ncan-201ENSMUST00000002412 Rtl5Q5DTT4 599 aa17.93■□□□□ 0.46
Ncan-201ENSMUST00000002412 Os9Q8K2C7 672 aa17.92■□□□□ 0.46
Ncan-201ENSMUST00000002412 NclP09405 707 aaKnown RBP17.91■□□□□ 0.46
Ncan-201ENSMUST00000002412 Anp32bQ9EST5 272 aaKnown RBP17.89■□□□□ 0.45
Ncan-201ENSMUST00000002412 Supt5hO55201 1082 aaKnown RBP17.87■□□□□ 0.45
Ncan-201ENSMUST00000002412 Fam50aQ9WV03 339 aaKnown RBP17.77■□□□□ 0.44
Ncan-201ENSMUST00000002412 Ap3b1Q9Z1T1 1105 aa17.76■□□□□ 0.43
Ncan-201ENSMUST00000002412 Chic1Q8CBW7 227 aa17.7■□□□□ 0.42
Ncan-201ENSMUST00000002412 Anp32aO35381 247 aa17.59■□□□□ 0.41
Ncan-201ENSMUST00000002412 Polr3glQ8R0C0 218 aa17.56■□□□□ 0.4
Ncan-201ENSMUST00000002412 Csrnp3P59055 597 aa17.56■□□□□ 0.4
Ncan-201ENSMUST00000002412 Zbtb4Q5F293 982 aa17.52■□□□□ 0.4
Ncan-201ENSMUST00000002412 Il27Q8K3I6 234 aa17.5■□□□□ 0.39
Ncan-201ENSMUST00000002412 Zbtb7cQ8VCZ7 619 aa17.5■□□□□ 0.39
Ncan-201ENSMUST00000002412 Vsig10D3YX43 558 aa17.49■□□□□ 0.39
Ncan-201ENSMUST00000002412 Mapk8ip2Q9ERE9 830 aa17.49■□□□□ 0.39
Ncan-201ENSMUST00000002412 Prdm10Q3UTQ7 1184 aa17.48■□□□□ 0.39
Ncan-201ENSMUST00000002412 Upf2A2AT37 1269 aaKnown RBP17.46■□□□□ 0.39
Ncan-201ENSMUST00000002412 TonslQ6NZL6 1363 aa17.45■□□□□ 0.38
Ncan-201ENSMUST00000002412 Rangap1P46061 589 aaKnown RBP17.43■□□□□ 0.38
Ncan-201ENSMUST00000002412 Ccdc180J3QNE4 1664 aa17.42■□□□□ 0.38
Ncan-201ENSMUST00000002412 DekQ7TNV0 380 aaKnown RBP17.29■□□□□ 0.36
Ncan-201ENSMUST00000002412 Nlrp6Q91WS2 869 aa17.25■□□□□ 0.35
Ncan-201ENSMUST00000002412 Ppp4r2Q0VGB7 417 aa17.21■□□□□ 0.35
Ncan-201ENSMUST00000002412 Hsp90aa1P07901 733 aaKnown RBP17.2■□□□□ 0.34
Ncan-201ENSMUST00000002412 Mier1Q5UAK0 511 aa17.14■□□□□ 0.34
Ncan-201ENSMUST00000002412 Hnrnpul2Q00PI9 745 aaKnown RBP17.13■□□□□ 0.33
Ncan-201ENSMUST00000002412 Znf316Q6PGE4 1016 aa17.12■□□□□ 0.33
Ncan-201ENSMUST00000002412 Atp1b4Q99ME6 356 aa17.11■□□□□ 0.33
Ncan-201ENSMUST00000002412 Rtl1Q7M732 1744 aa17.09■□□□□ 0.33
Ncan-201ENSMUST00000002412 Trim44Q9QXA7 346 aa17.08■□□□□ 0.32
Ncan-201ENSMUST00000002412 Arid4bA2CG63 1314 aaKnown RBP17.06■□□□□ 0.32
Ncan-201ENSMUST00000002412 Gm13697A2AK42 830 aa17.05■□□□□ 0.32
Ncan-201ENSMUST00000002412 Erich6D3Z6S9 713 aa17.04■□□□□ 0.32
Ncan-201ENSMUST00000002412 ClspnQ80YR7 1315 aa17.01■□□□□ 0.31
Ncan-201ENSMUST00000002412 NischQ80TM9 1593 aa16.99■□□□□ 0.31
Ncan-201ENSMUST00000002412 Rad21Q61550 635 aaKnown RBP16.97■□□□□ 0.31
Ncan-201ENSMUST00000002412 Calr4Q3TQS0 420 aa16.96■□□□□ 0.31
Ncan-201ENSMUST00000002412 Anks4bQ8K3X6 423 aa16.95■□□□□ 0.3
Ncan-201ENSMUST00000002412 Lmod2Q3UHZ5 550 aa16.94■□□□□ 0.3
Ncan-201ENSMUST00000002412 Ifnlr1Q8CGK5 535 aa16.93■□□□□ 0.3
Ncan-201ENSMUST00000002412 PtmaP26350 111 aa16.91■□□□□ 0.3
Ncan-201ENSMUST00000002412 Aplp2Q06335 707 aa16.91■□□□□ 0.3
Ncan-201ENSMUST00000002412 Podxl2Q8CAE9 603 aa16.9■□□□□ 0.3
Ncan-201ENSMUST00000002412 Trim26Q99PN3 545 aa16.83■□□□□ 0.28
Ncan-201ENSMUST00000002412 Fam71e1A1L3C1 212 aa16.82■□□□□ 0.28
Ncan-201ENSMUST00000002412 Eid3Q3V124 375 aa16.82■□□□□ 0.28
Ncan-201ENSMUST00000002412 Sall2Q9QX96 1004 aa16.82■□□□□ 0.28
Ncan-201ENSMUST00000002412 Plekhg3Q4VAC9 1341 aa16.82■□□□□ 0.28
Ncan-201ENSMUST00000002412 Spryd3E9Q9B3 442 aa16.81■□□□□ 0.28
Ncan-201ENSMUST00000002412 Bcl11aQ9QYE3 773 aa16.79■□□□□ 0.28
Ncan-201ENSMUST00000002412 CanxP35564 591 aaKnown RBP16.78■□□□□ 0.28
Ncan-201ENSMUST00000002412 Wdr43Q6ZQL4 677 aaKnown RBP16.78■□□□□ 0.28
Ncan-201ENSMUST00000002412 Taok2Q6ZQ29 1240 aa16.77■□□□□ 0.28
Ncan-201ENSMUST00000002412 Gm13695A2AK44 830 aa16.77■□□□□ 0.27
Ncan-201ENSMUST00000002412 Hsp90ab1P11499 724 aaKnown RBP16.77■□□□□ 0.27
Ncan-201ENSMUST00000002412 Tnnt2P50752 301 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms