Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Gm25239-201ENSMUST00000174915 86 ntBASIC40.67■■■■■ 4.1
Frem3Q5H8B9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Frem3Q5H8B9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Frem3Q5H8B9 Gm24109-201ENSMUST00000175489 103 ntBASIC35.44■■■■□ 3.26
Frem3Q5H8B9 Gm15042-201ENSMUST00000120212 883 ntBASIC35.24■■■■□ 3.23
Frem3Q5H8B9 Gm15045-201ENSMUST00000117359 883 ntBASIC34.6■■■■□ 3.13
Frem3Q5H8B9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Frem3Q5H8B9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Frem3Q5H8B9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Frem3Q5H8B9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Frem3Q5H8B9 Gm23366-201ENSMUST00000175022 89 ntBASIC33.84■■■■□ 3.01
Frem3Q5H8B9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Frem3Q5H8B9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Frem3Q5H8B9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.05■■■□□ 2.88
Frem3Q5H8B9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Frem3Q5H8B9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.77■■■□□ 2.84
Frem3Q5H8B9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.66■■■□□ 2.82
Frem3Q5H8B9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Frem3Q5H8B9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Frem3Q5H8B9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
Frem3Q5H8B9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Frem3Q5H8B9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Frem3Q5H8B9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Frem3Q5H8B9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.2■■■□□ 2.74
Frem3Q5H8B9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.19■■■□□ 2.74
Frem3Q5H8B9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Frem3Q5H8B9 Gm25238-201ENSMUST00000174914 89 ntBASIC32.15■■■□□ 2.74
Frem3Q5H8B9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Frem3Q5H8B9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Frem3Q5H8B9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Frem3Q5H8B9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
Frem3Q5H8B9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.72■■■□□ 2.67
Frem3Q5H8B9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Frem3Q5H8B9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
Frem3Q5H8B9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Frem3Q5H8B9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Frem3Q5H8B9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Frem3Q5H8B9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Frem3Q5H8B9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.19■■■□□ 2.58
Frem3Q5H8B9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Frem3Q5H8B9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.16■■■□□ 2.58
Frem3Q5H8B9 Gm27325-201ENSMUST00000175467 74 ntBASIC30.98■■■□□ 2.55
Frem3Q5H8B9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.96■■■□□ 2.55
Frem3Q5H8B9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Frem3Q5H8B9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.86■■■□□ 2.53
Frem3Q5H8B9 Psd-208ENSMUST00000224556 2034 ntBASIC30.8■■■□□ 2.52
Frem3Q5H8B9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Frem3Q5H8B9 Gm25262-201ENSMUST00000174934 133 ntBASIC30.79■■■□□ 2.52
Frem3Q5H8B9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Frem3Q5H8B9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.48■■■□□ 2.47
Frem3Q5H8B9 Rab21-202ENSMUST00000218831 843 ntBASIC30.46■■■□□ 2.47
Frem3Q5H8B9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.45■■■□□ 2.47
Frem3Q5H8B9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Frem3Q5H8B9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
Frem3Q5H8B9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Frem3Q5H8B9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.31■■■□□ 2.44
Frem3Q5H8B9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Frem3Q5H8B9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.28■■■□□ 2.44
Frem3Q5H8B9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.28■■■□□ 2.44
Frem3Q5H8B9 Gm26115-201ENSMUST00000175605 87 ntBASIC30.22■■■□□ 2.43
Frem3Q5H8B9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Frem3Q5H8B9 Gm8109-201ENSMUST00000194076 746 ntBASIC30.14■■■□□ 2.42
Frem3Q5H8B9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.14■■■□□ 2.42
Frem3Q5H8B9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Frem3Q5H8B9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Frem3Q5H8B9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.11■■■□□ 2.41
Frem3Q5H8B9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.1■■■□□ 2.41
Frem3Q5H8B9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Frem3Q5H8B9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Frem3Q5H8B9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Frem3Q5H8B9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.39
Frem3Q5H8B9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.98■■■□□ 2.39
Frem3Q5H8B9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Frem3Q5H8B9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Frem3Q5H8B9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Frem3Q5H8B9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.9■■■□□ 2.38
Frem3Q5H8B9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Frem3Q5H8B9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Frem3Q5H8B9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Frem3Q5H8B9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Frem3Q5H8B9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Frem3Q5H8B9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
Frem3Q5H8B9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Frem3Q5H8B9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Frem3Q5H8B9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Frem3Q5H8B9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Frem3Q5H8B9 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.48■■■□□ 2.31
Frem3Q5H8B9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.44■■■□□ 2.3
Frem3Q5H8B9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Frem3Q5H8B9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Frem3Q5H8B9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.39■■■□□ 2.3
Frem3Q5H8B9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Frem3Q5H8B9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.38■■■□□ 2.29
Frem3Q5H8B9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Frem3Q5H8B9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Frem3Q5H8B9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.27■■■□□ 2.28
Frem3Q5H8B9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Frem3Q5H8B9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Frem3Q5H8B9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Frem3Q5H8B9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms