RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 P03980 138 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Dock5B2RY04 1868 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Greb1lB9EJV3 1913 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 March3Q8BRX9 218 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Gm26558Q8BLW8 286 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Igkv3-9A0A140T8P4 119 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Dad1P61804 113 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Rspo3Q2TJ95 277 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Cd300eQ8K249 196 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Morn5Q9DAI9 170 aa14.13□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Igkv8-34A0A0G2JDU0 121 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Tnfrsf23Q9ER63 176 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Spink8Q09TK9 105 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Ighv6-7A0A0A6YWU3 119 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Ighv1-69A0A0G2JFS5 117 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Foxc1Q61572 553 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 P01802 115 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Mbd6Q3TY92 1003 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Spink12Q9D256 87 aa14.12□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Trav14-3A0A075B607 120 aa14.11□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Mustn1Q99JI1 82 aa14.11□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Sdhaf1Q3U276 118 aa14.11□□□□□ -0.15
Pcf11-201ENSMUST00000119954 A930003A15RikQ3U552 87 aa14.11□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Shank3Q4ACU6 1730 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 P01660 111 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Edn1P22387 202 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Lrrk1Q3UHC2 2014 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 TprF6ZDS4 2431 aaKnown RBP14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Gbf1Q6DFZ1 1861 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Ighv1-16A0A075B5U1 98 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Gm43517E9PYS1 339 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Olfr312Q7TRZ9 308 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Loxhd1C8YR32 2068 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Trav12-3A0A075B648 115 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Stpg1Q9D2F5 341 aa14.1□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Atg2bQ80XK6 2075 aa14.09□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Cox6a1P43024 111 aa14.09□□□□□ -0.15
Pcf11-201ENSMUST00000119954 C730034F03RikQ8BGL5 111 aa14.09□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Ociad2Q9D8W7 154 aa14.09□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Trav6n-6A0A075B6B2 114 aa14.09□□□□□ -0.15
Pcf11-201ENSMUST00000119954 ApomQ9Z1R3 190 aa14.09□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Zfp648D3Z0W3 525 aa14.08□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Atp6v0e1Q9CQD8 81 aa14.08□□□□□ -0.15
Pcf11-201ENSMUST00000119954 Pi4kaE9Q3L2 2105 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Igkv4-74A0A0B4J1I3 119 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 OtosQ8R448 89 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Trav14d-1A0A075B6B1 121 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Dpm3Q9D1Q4 92 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 P01792 123 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Gm10762Q9CZN6 115 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Gata4Q08369 441 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Pygo2Q80V76 405 aa14.08□□□□□ -0.16
Pcf11-201ENSMUST00000119954 PoleQ9WVF7 2283 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ighv3-4A0A0A6YXF1 117 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Zmat4Q8BZ94 229 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Gm15294V9GXA7 121 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ubr3Q5U430 1889 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 SvipQ3UZP4 77 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Wnk2Q3UH66 2149 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 BC035044E0CXF8 138 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ang5Q5GAN1 145 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Kmt2eQ3UG20 1868 aa14.07□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Plscr4P58196 326 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Rbmy1bQ60990 380 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 4930415O20RikQ8CDT5 131 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Trav9d-4A0A0G2JG37 103 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Crlf1Q9JM58 425 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Taf1Q80UV9 1891 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Brk1Q91VR8 75 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Mrps21P58059 87 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 P01794 123 aa14.06□□□□□ -0.16
Pcf11-201ENSMUST00000119954 OtofQ9ESF1 1997 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Inafm1E9PV59 130 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 P01793 123 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Edn3P48299 214 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Defb29Q8BGW9 78 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ighv8-8A0A0A6YXQ0 119 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Pom121l2Q5SW25 972 aa14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ndufa12Q7TMF3 145 aaKnown RBP14.05□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Them7Q9DCP4 223 aa14.04□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Med12lQ8BQM9 2157 aa14.04□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ang2Q64438 145 aa14.04□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Mcm3apQ9WUU9 1971 aa14.03□□□□□ -0.16
Pcf11-201ENSMUST00000119954 P01789 122 aa14.03□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ros1Q78DX7 2340 aa14.03□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Znrd1Q791N7 123 aa14.03□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ralgapa1Q6GYP7 2035 aa14.03□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Olfr313Q5NC55 308 aa14.03□□□□□ -0.16
Pcf11-201ENSMUST00000119954 AtrxQ61687 2476 aaKnown RBP14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ighv1-23A0A0A6YVW3 117 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ighv8-4A0A0A6YW26 117 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Igkv9-123A0A140T8N8 117 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 P04946 108 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Slc25a48Q8BW66 306 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Ifitm1Q9D103 106 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 FAM186AQ9D9R9 1790 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Col18a1P39061 1774 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Tmem14cQ9CQN6 114 aa14.02□□□□□ -0.16
Pcf11-201ENSMUST00000119954 Trav6-6A0A075B603 114 aa14.02□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Cox7cP17665 63 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms