Protein–RNA interactions for Protein: Q80UV9

Taf1, Transcription initiation factor TFIID subunit 1, mousemouse

Predictions only

Length 1,891 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1Q80UV9 Gm25239-201ENSMUST00000174915 86 ntBASIC41.71■■■■■ 4.27
Taf1Q80UV9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
Taf1Q80UV9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
Taf1Q80UV9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Taf1Q80UV9 Gm15042-201ENSMUST00000120212 883 ntBASIC36.52■■■■□ 3.44
Taf1Q80UV9 Gm24109-201ENSMUST00000175489 103 ntBASIC36.32■■■■□ 3.4
Taf1Q80UV9 Gm15045-201ENSMUST00000117359 883 ntBASIC35.91■■■■□ 3.34
Taf1Q80UV9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Taf1Q80UV9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
Taf1Q80UV9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Taf1Q80UV9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Taf1Q80UV9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Taf1Q80UV9 Gm23366-201ENSMUST00000175022 89 ntBASIC34.81■■■■□ 3.16
Taf1Q80UV9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Taf1Q80UV9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Taf1Q80UV9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.04■■■■□ 3.04
Taf1Q80UV9 Psd-208ENSMUST00000224556 2034 ntBASIC33.98■■■■□ 3.03
Taf1Q80UV9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Taf1Q80UV9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.69■■■□□ 2.98
Taf1Q80UV9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Taf1Q80UV9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Taf1Q80UV9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
Taf1Q80UV9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Taf1Q80UV9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.47■■■□□ 2.95
Taf1Q80UV9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Taf1Q80UV9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.45■■■□□ 2.95
Taf1Q80UV9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Taf1Q80UV9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Taf1Q80UV9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.27■■■□□ 2.92
Taf1Q80UV9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.26■■■□□ 2.91
Taf1Q80UV9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Taf1Q80UV9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Taf1Q80UV9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Taf1Q80UV9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Taf1Q80UV9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.91■■■□□ 2.86
Taf1Q80UV9 Gm25238-201ENSMUST00000174914 89 ntBASIC32.87■■■□□ 2.85
Taf1Q80UV9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Taf1Q80UV9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Taf1Q80UV9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Taf1Q80UV9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.69■■■□□ 2.82
Taf1Q80UV9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Taf1Q80UV9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Taf1Q80UV9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
Taf1Q80UV9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Taf1Q80UV9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Taf1Q80UV9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Taf1Q80UV9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.14■■■□□ 2.74
Taf1Q80UV9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Taf1Q80UV9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Taf1Q80UV9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32■■■□□ 2.71
Taf1Q80UV9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Taf1Q80UV9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Taf1Q80UV9 Gm27325-201ENSMUST00000175467 74 ntBASIC31.98■■■□□ 2.71
Taf1Q80UV9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.95■■■□□ 2.7
Taf1Q80UV9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Taf1Q80UV9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.89■■■□□ 2.7
Taf1Q80UV9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.69
Taf1Q80UV9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Taf1Q80UV9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Taf1Q80UV9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.66■■■□□ 2.66
Taf1Q80UV9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Taf1Q80UV9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Taf1Q80UV9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.47■■■□□ 2.63
Taf1Q80UV9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Taf1Q80UV9 Gm25262-201ENSMUST00000174934 133 ntBASIC31.38■■■□□ 2.61
Taf1Q80UV9 Rab21-202ENSMUST00000218831 843 ntBASIC31.38■■■□□ 2.61
Taf1Q80UV9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Taf1Q80UV9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Taf1Q80UV9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Taf1Q80UV9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
Taf1Q80UV9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Taf1Q80UV9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.22■■■□□ 2.59
Taf1Q80UV9 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.2■■■□□ 2.58
Taf1Q80UV9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Taf1Q80UV9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Taf1Q80UV9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.15■■■□□ 2.58
Taf1Q80UV9 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.12■■■□□ 2.57
Taf1Q80UV9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Taf1Q80UV9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.09■■■□□ 2.57
Taf1Q80UV9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Taf1Q80UV9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Taf1Q80UV9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.02■■■□□ 2.56
Taf1Q80UV9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Taf1Q80UV9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.95■■■□□ 2.55
Taf1Q80UV9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Taf1Q80UV9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Taf1Q80UV9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
Taf1Q80UV9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Taf1Q80UV9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Taf1Q80UV9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.86■■■□□ 2.53
Taf1Q80UV9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Taf1Q80UV9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Taf1Q80UV9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Taf1Q80UV9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Taf1Q80UV9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Taf1Q80UV9 Gm26115-201ENSMUST00000175605 87 ntBASIC30.66■■■□□ 2.5
Taf1Q80UV9 Gm8109-201ENSMUST00000194076 746 ntBASIC30.63■■■□□ 2.49
Taf1Q80UV9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.62■■■□□ 2.49
Taf1Q80UV9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.61■■■□□ 2.49
Taf1Q80UV9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms