RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Gm15127B1AVZ5 449 aa11.36□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm15107B1B0X0 449 aa11.36□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm15097E9QA14 449 aa11.36□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm15085Q62012 449 aa11.36□□□□□ -0.59
Col2a1-202ENSMUST00000088355 MgamB5THE2 1827 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Dennd4aE9Q8V6 1869 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm9961Q8BNV2 113 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Fxyd1Q9Z239 92 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Ighv5-9-1A0A0A6YVS4 126 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Pip4p1Q3TWL2 284 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 OtorQ9JIE3 128 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 LitafQ9JLJ0 161 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Ighv8-4A0A0A6YW26 117 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Q08AU9 97 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm27027S4R1M6 97 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Heatr5aQ5PRF0 2038 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Igkv4-70A0A0B4J1I5 116 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm9513B3GLJ6 99 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Cks1bP61025 79 aa11.35□□□□□ -0.59
Col2a1-202ENSMUST00000088355 P01792 123 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 P03980 138 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Ssbp2Q9CYZ8 361 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Igkv1-99F6XWB2 120 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Mrpl53Q9D1H8 118 aaKnown RBP11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Trip12G5E870 2025 aaKnown RBP11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Gm15217A2CG07 155 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Vamp8O70404 101 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Vmo1Q5SXG7 201 aa11.34□□□□□ -0.59
Col2a1-202ENSMUST00000088355 Smim10l1A0A087WNQ7 89 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Gm867A0A1W2P7T4 151 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Uqcrfs1Q9CR68 274 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Gm26938S4R185 226 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Wisp3D3Z5L9 354 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tex26Q0VB26 296 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Mbd6Q3TY92 1003 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Gm33815A0A087WNV3 176 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P04940 107 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P04941 107 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tcl1b4P56844 120 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 8030423J24RikQ9CX45 142 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Spata25Q9DA57 226 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Mrpl32Q9DCI9 187 aaKnown RBP11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Alms1Q8K4E0 3251 aa11.33□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P01786 117 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Rspo3Q2TJ95 277 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Pgpep1Q9ESW8 209 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Igkv3-2A0A075B5P0 119 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Trav14n-3A0A075B645 120 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P06330 118 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Hint1P70349 126 aaKnown RBP11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tmem210Q9D2F0 147 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Trbv3A0A0A6YYE2 117 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Esp24A8R0V6 68 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P03985 172 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Pfn1P62962 140 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Supt4h1bQ9Z199 117 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 CstadQ9D245 104 aa11.32□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P01789 122 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Wt1P22561 449 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tmem86bQ497J1 226 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 9430097D07RikQ8BS47 195 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 PmvkQ9D1G2 192 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 MsmpB1AWI6 139 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 SlpiP97430 131 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Zmat4Q8BZ94 229 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Dppa2Q9CWH0 301 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Klk1b4P00757 256 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tex48Q9DA81 110 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 MylkQ6PDN3 1941 aaKnown RBP11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Defa4P28311 92 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Pkd1l2Q7TN88 2461 aa11.31□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Ighv1-74A0A0G2JGK2 117 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Gm6040Q4QY32 63 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Slamf6Q9ET39 351 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Id3P41133 119 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Dad1P61804 113 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 9930022D16RikQ8BG27 128 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Igkv3-1A0A075B5P1 119 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Nxph4G3X9N5 304 aa11.3□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tmem238A9JSM3 176 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Notch2O35516 2470 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Lyg1Q9D7Q0 197 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Gm16686Q3UMN9 131 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Olfr1367Q8VFG2 316 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 KprpB2RUR4 657 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Reg3gO09049 174 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Polr3kQ9CQZ7 108 aa11.29□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Ighv1-4A0A075B5T4 117 aa11.28□□□□□ -0.6
Col2a1-202ENSMUST00000088355 A230072I06RikQ3UUJ8 172 aa11.28□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P01811 117 aa11.28□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Ighv1-19A0A0A6YWX0 117 aa11.28□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Defa20Q45VN2 95 aa11.28□□□□□ -0.6
Col2a1-202ENSMUST00000088355 P01643 108 aa11.27□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Tspan13Q9D8C2 204 aa11.27□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Lamtor2Q9JHS3 125 aa11.27□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Plac1Q9JI83 173 aa11.27□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Dmrt3Q80WT2 476 aa11.27□□□□□ -0.6
Col2a1-202ENSMUST00000088355 Ube2cQ9D1C1 179 aa11.27□□□□□ -0.6
Col2a1-202ENSMUST00000088355 1500009C09RikD3YYW9 81 aa11.27□□□□□ -0.61
Col2a1-202ENSMUST00000088355 Map6d1Q14BB9 191 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms