Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm25239-201ENSMUST00000174915 86 ntBASIC38,77■■■■□ 3,8
Alms1Q8K4E0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36,04■■■■□ 3,36
Alms1Q8K4E0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35,32■■■■□ 3,25
Alms1Q8K4E0 Gm24109-201ENSMUST00000175489 103 ntBASIC34,01■■■■□ 3,04
Alms1Q8K4E0 Gm15042-201ENSMUST00000120212 883 ntBASIC33,32■■■□□ 2,92
Alms1Q8K4E0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,89■■■□□ 2,85
Alms1Q8K4E0 Gm15045-201ENSMUST00000117359 883 ntBASIC32,88■■■□□ 2,85
Alms1Q8K4E0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,78■■■□□ 2,84
Alms1Q8K4E0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,5■■■□□ 2,79
Alms1Q8K4E0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32,36■■■□□ 2,77
Alms1Q8K4E0 Gm23366-201ENSMUST00000175022 89 ntBASIC32,15■■■□□ 2,74
Alms1Q8K4E0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Alms1Q8K4E0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,75■■■□□ 2,67
Alms1Q8K4E0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,65■■■□□ 2,66
Alms1Q8K4E0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,51■■■□□ 2,63
Alms1Q8K4E0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31,45■■■□□ 2,62
Alms1Q8K4E0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Alms1Q8K4E0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,61
Alms1Q8K4E0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31,23■■■□□ 2,59
Alms1Q8K4E0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,95■■■□□ 2,55
Alms1Q8K4E0 Gm25238-201ENSMUST00000174914 89 ntBASIC30,9■■■□□ 2,54
Alms1Q8K4E0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Alms1Q8K4E0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30,83■■■□□ 2,53
Alms1Q8K4E0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Alms1Q8K4E0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,72■■■□□ 2,51
Alms1Q8K4E0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,6■■■□□ 2,49
Alms1Q8K4E0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Alms1Q8K4E0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,41■■■□□ 2,46
Alms1Q8K4E0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Alms1Q8K4E0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,2■■■□□ 2,42
Alms1Q8K4E0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,14■■■□□ 2,41
Alms1Q8K4E0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30,13■■■□□ 2,41
Alms1Q8K4E0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Alms1Q8K4E0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29,99■■■□□ 2,39
Alms1Q8K4E0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29,95■■■□□ 2,39
Alms1Q8K4E0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,9■■■□□ 2,38
Alms1Q8K4E0 Gm25262-201ENSMUST00000174934 133 ntBASIC29,75■■■□□ 2,35
Alms1Q8K4E0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29,68■■■□□ 2,34
Alms1Q8K4E0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,64■■■□□ 2,33
Alms1Q8K4E0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,62■■■□□ 2,33
Alms1Q8K4E0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,57■■■□□ 2,32
Alms1Q8K4E0 Psd-208ENSMUST00000224556 2034 ntBASIC29,46■■■□□ 2,31
Alms1Q8K4E0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,3
Alms1Q8K4E0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Alms1Q8K4E0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29,43■■■□□ 2,3
Alms1Q8K4E0 Gm27325-201ENSMUST00000175467 74 ntBASIC29,35■■■□□ 2,29
Alms1Q8K4E0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Alms1Q8K4E0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29,27■■■□□ 2,28
Alms1Q8K4E0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29,26■■■□□ 2,27
Alms1Q8K4E0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Alms1Q8K4E0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29,16■■■□□ 2,26
Alms1Q8K4E0 Gm26115-201ENSMUST00000175605 87 ntBASIC29,16■■■□□ 2,26
Alms1Q8K4E0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29,13■■■□□ 2,25
Alms1Q8K4E0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,09■■■□□ 2,25
Alms1Q8K4E0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,98■■■□□ 2,23
Alms1Q8K4E0 Rab21-202ENSMUST00000218831 843 ntBASIC28,95■■■□□ 2,23
Alms1Q8K4E0 Gm8109-201ENSMUST00000194076 746 ntBASIC28,93■■■□□ 2,22
Alms1Q8K4E0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
Alms1Q8K4E0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Alms1Q8K4E0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,88■■■□□ 2,21
Alms1Q8K4E0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,86■■■□□ 2,21
Alms1Q8K4E0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28,81■■■□□ 2,2
Alms1Q8K4E0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28,77■■■□□ 2,2
Alms1Q8K4E0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28,74■■■□□ 2,19
Alms1Q8K4E0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,74■■■□□ 2,19
Alms1Q8K4E0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
Alms1Q8K4E0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,68■■■□□ 2,18
Alms1Q8K4E0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Alms1Q8K4E0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,65■■■□□ 2,18
Alms1Q8K4E0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Alms1Q8K4E0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Alms1Q8K4E0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28,59■■■□□ 2,17
Alms1Q8K4E0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
Alms1Q8K4E0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28,52■■■□□ 2,16
Alms1Q8K4E0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28,37■■■□□ 2,13
Alms1Q8K4E0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Alms1Q8K4E0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,32■■■□□ 2,12
Alms1Q8K4E0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28,28■■■□□ 2,12
Alms1Q8K4E0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
Alms1Q8K4E0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Alms1Q8K4E0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Alms1Q8K4E0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28,23■■■□□ 2,11
Alms1Q8K4E0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Alms1Q8K4E0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Alms1Q8K4E0 Gm24804-201ENSMUST00000174982 85 ntBASIC28,1■■■□□ 2,09
Alms1Q8K4E0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Alms1Q8K4E0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28,06■■■□□ 2,08
Alms1Q8K4E0 Gm17082-201ENSMUST00000166043 1091 ntBASIC28,03■■■□□ 2,08
Alms1Q8K4E0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28,03■■■□□ 2,08
Alms1Q8K4E0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28,02■■■□□ 2,08
Alms1Q8K4E0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,08
Alms1Q8K4E0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28■■■□□ 2,07
Alms1Q8K4E0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,97■■■□□ 2,07
Alms1Q8K4E0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,91■■■□□ 2,06
Alms1Q8K4E0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,9■■■□□ 2,06
Alms1Q8K4E0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,9■■■□□ 2,06
Alms1Q8K4E0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Alms1Q8K4E0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Alms1Q8K4E0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Alms1Q8K4E0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27,81■■■□□ 2,04
Retrieved 100 of 76,532 protein–RNA pairs in 10,3 ms