RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Gm2564F6Z9S8 108 aa7.56□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ccl19O70460 108 aa7.56□□□□□ -1.2
Scn8a-213ENSMUST00000201549 P01787 123 aa7.56□□□□□ -1.2
Scn8a-213ENSMUST00000201549 P01811 117 aa7.56□□□□□ -1.2
Scn8a-213ENSMUST00000201549 LtaP09225 202 aa7.56□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Hist2h2beQ64524 126 aa7.56□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Igkv4-80A0A075B5L7 116 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ighv5-12-4A0A0A6YWG4 117 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ighv1-20A0A0A6YX66 117 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Csrp1P97315 193 aaKnown RBP7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Col4a6B1AVK5 1691 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ca1P13634 261 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 MymxQ2Q5T5 84 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Spsb3Q571F5 354 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm15294V9GXA7 121 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Igkv12-89A0A0G2JGW8 112 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 P01790 122 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ormdl3Q9CPZ6 153 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Trav7n-4A0A075B620 113 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Lcn2P11672 200 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Klk1b22P15948 259 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 P18532 116 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Prima1Q810F0 153 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm10447Q3UQ92 135 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Trdv4Q5R1A3 115 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 AgerQ62151 402 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 OstcQ78XF5 149 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Rspo1Q9Z132 265 aa7.55□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Spink4O35679 86 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Msrb2Q78J03 175 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Immp1lQ9CQU8 166 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Igkv4-57A0A0A6YYE7 117 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm21983D6RFS9 131 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Mtatp8P03930 67 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Reg1P43137 165 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Runx1Q03347 451 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm4894Q8CA09 118 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ube2wQ8VDW4 151 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Olfr211Q8VGH2 309 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 SptssbQ925E8 76 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Prok2Q9QXU7 128 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm10020E9QAZ2 204 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm10645Q3UPY1 145 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ube2d2bQ6ZWY6 147 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Rpl15Q9CZM2 204 aaKnown RBP7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Iah1Q9DB29 249 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Nat6Q9R123 314 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ighv1-36A0A0A6YXT2 117 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Tmem243B2RVB9 118 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 GrnP28798 589 aaKnown RBP7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Zic4Q61467 341 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Arpc1aQ9R0Q6 370 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 P01802 115 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Rps20P60867 119 aaKnown RBP7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Tmem258P61166 79 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm10384Q3UQ87 92 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Znrd1Q791N7 123 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ss18l1Q8BW22 402 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Tanc2A2A690 1994 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm20825J3QM67 227 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm20854Q62461 227 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Saxo2Q8BQB6 394 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Higd1bQ99JY6 98 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Obox1Q9D350 204 aa7.54□□□□□ -1.2
Scn8a-213ENSMUST00000201549 P01660 111 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Tomm40Q9QYA2 361 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Trdv1A0A075B657 112 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Gm17677B3GLJ5 116 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 PigyP0C1P0 71 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Cdpf1Q8R3A2 119 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Pear1Q8VIK5 1034 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Zfp407G3UVV3 2246 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Ca5aP23589 299 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Morn2Q6UL01 79 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Cd300eQ8K249 196 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Stpg1Q9D2F5 341 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Cysltr1Q99JA4 352 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 PpbpQ9EQI5 113 aa7.53□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Trav6d-3A0A075B6B3 112 aa7.52□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Lgals6O54891 301 aa7.52□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Trav6-3Q5R1E6 112 aa7.52□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Rnf125Q9D9R0 233 aa7.52□□□□□ -1.2
Scn8a-213ENSMUST00000201549 Cox7a1P56392 80 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Znf260Q62513 407 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 ChtopQ9CY57 249 aaKnown RBP7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Trav14n-2A0A0G2JDF5 121 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Bcl6bO88282 474 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Mbd6Q3TY92 1003 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Olfr433Q7TRV9 314 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tet1Q3URK3 2007 aaKnown RBP7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm933J3QPC1 141 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 P01723 117 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Cdkn1aP39689 159 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tmem167aQ9CR64 72 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Trav9-1A0A075B601 112 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Trav9d-1A0A075B699 112 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Igkv20-101-2A0A0G2JDU3 113 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ly6lH3BJG9 140 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Slc17a9Q8VCL5 447 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Pgpep1lQ9CWB5 130 aa7.52□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms