RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gm11020F6ZGD5 61 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm21370Q3T9V6 190 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 ArtnQ9Z0L2 224 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm2174F6ZVF2 133 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Wt1P22561 449 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Edn3P48299 214 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 MdfiP70331 251 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Trav7d-3Q5R1I1 112 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 H1fxQ80ZM5 188 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ighv1-55A0A075B5W6 117 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Igkv12-89A0A0G2JGW8 112 aa11.88□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ighv1-62-3P01754 117 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Itgb4A2A863 1818 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Dock10Q8BZN6 2150 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Igkv20-101-2A0A0G2JDU3 113 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Q8R092 253 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Znhit3Q9CQK1 151 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Samd13D3YUG0 102 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Lhfpl1Q80SV1 220 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm5105Q8C6Y9 112 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 8030423J24RikQ9CX45 142 aa11.87□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 P01788 123 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Minos1Q7TNS2 76 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 4930442H23RikQ9D5G7 103 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Lrrk1Q3UHC2 2014 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Igkv1-99F6XWB2 120 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ntf4Q80VU4 209 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 PmvkQ9D1G2 192 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 9130213A22RikQ3V3T2 120 aa11.86□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm28778A0A087WSK7 233 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Tmem200bD3Z0P8 284 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Srsf2Q62093 221 aaKnown RBP11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Inafm1E9PV59 130 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gemin7Q9CWY4 129 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Cacna1hO88427 2365 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Ly6c1P0CW02 131 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Defa16P50714 93 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 AcacaQ5SWU9 2345 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 CntfrO88507 372 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Rnf144bQ8BKD6 301 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 ThadaA8C756 1938 aa11.85□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Trav7-2Q5R1I3 112 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Igf2rQ07113 2483 aaKnown RBP11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 P01811 117 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Samd5Q3V1H9 173 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Vmo1Q5SXG7 201 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Mogat1Q91ZV4 335 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm4744D3Z3S5 154 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Pglyrp4Q0VB07 374 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Med13Q5SWW4 2171 aa11.84□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm10767Q3TQP0 103 aa11.83□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gm12253Q5NC48 229 aa11.83□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Q80X32 188 aaKnown RBP11.83□□□□□ -0.51
Pcdh20-201ENSMUST00000061628 Gata4Q08369 441 aa11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Erdr1J3QMM0 206 aa11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 P04945 108 aa11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 PifoQ9D9W1 207 aa11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 P01790 122 aa11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 P03980 138 aa11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ndufa4Q62425 82 aaKnown RBP11.83□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Rnf114Q9ET26 229 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ighv5-8A0A075B676 92 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 CckP09240 115 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Tcl1b4P56844 120 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ankrd39Q9D2X0 183 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ighv5-9-1A0A0A6YVS4 126 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Gm45213A0A0U1RNZ6 101 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 BC035044E0CXF8 138 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Rpl35aO55142 110 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Rs1Q9Z1L4 224 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 StrcQ8VIM6 1809 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Pi4kaE9Q3L2 2105 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Defa4P28311 92 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Pygo2Q80V76 405 aa11.82□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Gm5294J3QP53 216 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Edn1P22387 202 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Defa26Q3L180 93 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ang2Q64438 145 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 LoxP28301 411 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 AmelxP63277 210 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Card19Q9D1I2 183 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Trav9d-1A0A075B699 112 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ighv1-19A0A0A6YWX0 117 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 P01787 123 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 HampQ9EQ21 83 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ptprz1B9EKR1 2312 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Trav14n-2A0A0G2JDF5 121 aa11.81□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Igkv3-1A0A075B5P1 119 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Wfdc11A2A5H7 82 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Rpl32-psP17932 135 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ube2e2Q91W82 201 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 MpdzQ8VBX6 2055 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Wisp3D3Z5L9 354 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Smim26Q3V460 107 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Fam216bQ8CC14 138 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Gm28269A0A087WSG3 125 aa11.8□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Asxl3Q8C4A5 2259 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Igkv3-2A0A075B5P0 119 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ighv3-6P18531 116 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Hist1h4aP62806 103 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 94.5 ms