RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Igkv6-13A0A0G2JGY3 119 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Prr3Q811B5 190 aaKnown RBP12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Defb12Q8K4N3 78 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Ccpg1osV9GXK1 122 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Brd3osA0A1B0GRB6 84 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Runx1Q03347 451 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 NmbQ9CR53 121 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Mrps11Q9DCA2 191 aaKnown RBP12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 MycbQ6P8Z1 170 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Cep295Q8BQ48 2412 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Trav9-1A0A075B601 112 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Trav9d-1A0A075B699 112 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Wisp1O54775 367 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Leap2Q91V13 76 aa12.93□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm44973A0A140LJJ1 189 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Asphd1Q2TA57 360 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Q8VE95 218 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Znf524Q9D0B1 321 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Hbb-b1P02088 147 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Psg25Q497W1 475 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Cxcl14Q9WUQ5 99 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Cd59bP58019 129 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Zglp1Q1WG82 266 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 9230102O04RikA2ASX7 82 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Sp9Q64HY3 484 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 C330021F23RikQ8C7T0 141 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Rchy1Q9CR50 261 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Zcchc24B2RVL6 241 aaKnown RBP12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Grem1O70326 184 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Fam168aQ8BGZ2 244 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 SlpiP97430 131 aa12.92□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Zfhx2Q2MHN3 2562 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Trav4-4-dv10A0A075B651 110 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Spink12Q9D256 87 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm15294V9GXA7 121 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Rnf183Q8QZS5 190 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Rpl36aP83882 106 aaKnown RBP12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Igkv8-16A0A0G2JDG9 121 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Supt4h1aP63271 117 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Cd5lQ9QWK4 352 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Plekhb2Q9QZC7 221 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm6040Q4QY32 63 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Crlf1Q9JM58 425 aa12.91□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Acyp1P56376 99 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Il19Q8CJ70 176 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 1700001C19RikQ8K168 210 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Igkv4-86A0A0G2JGE7 114 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm9513B3GLJ6 99 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Psmb11Q8BG41 302 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Gm10306Q9CUK2 115 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Cxcl10P17515 98 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 H2al1nQ497L1 109 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Itgb4A2A863 1818 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Wdr83osQ6ZWX0 106 aa12.9□□□□□ -0.34
Ubr3-201ENSMUST00000055758 Klk13Q8CGR6 276 aa12.9□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ltbp1Q8CG19 1712 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Col18a1P39061 1774 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Mtatp8P03930 67 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 PdpnQ62011 172 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Morn2Q6UL01 79 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Csrp3P50462 194 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Wbp1P97764 304 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Klf11Q8K1S5 502 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Tmem92B7ZWI3 162 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 3110018I06RikQ9CXS0 120 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Gm4894Q8CA09 118 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Zfp36l2P23949 484 aaKnown RBP12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Tm2d3Q8BJ83 261 aa12.89□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Prop1P97458 223 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Q4KKZ1 196 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Kiaa1549Q68FD9 1940 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ly86O88188 162 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Spsb3Q571F5 354 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Igkv14-130A0A0G2JF45 117 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Cox8bP48772 70 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ighv8-6A0A0A6YXA3 118 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 ApomQ9Z1R3 190 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Fam24aQ8CF27 98 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Slc25a39Q9D8K8 359 aa12.88□□□□□ -0.35
Ubr3-201ENSMUST00000055758 H2al1bA0A087WP11 105 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Eif4ebp2P70445 120 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Gm42517A0A1Y7VLQ2 374 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Iglc2P01844 104 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Amn1B8JKV0 258 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ly6g5bQ8K1T4 194 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Lime1Q9EQR5 269 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 SisF8VQM5 1818 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Trav6d-3A0A075B6B3 112 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ca5aP23589 299 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Trav6-3Q5R1E6 112 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Tcf15Q60756 195 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Saa4P31532 130 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Gm7489Q3UT34 171 aa12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Mrpl53Q9D1H8 118 aaKnown RBP12.87□□□□□ -0.35
Ubr3-201ENSMUST00000055758 4930546C10RikE9Q4Y3 121 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 BikO70337 150 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 P04219 140 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Lage3Q9CR70 148 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Ighv1-7A0A075B5T7 117 aa12.86□□□□□ -0.35
Ubr3-201ENSMUST00000055758 Gm10203F6QJ09 66 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms