Protein–RNA interactions for Protein: A0A140LJJ1

Gm44973, Predicted gene 44973, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44973A0A140LJJ1 Gm25239-201ENSMUST00000174915 86 ntBASIC34.41■■■■□ 3.1
Gm44973A0A140LJJ1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Gm44973A0A140LJJ1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Gm44973A0A140LJJ1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gm44973A0A140LJJ1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Gm44973A0A140LJJ1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Gm44973A0A140LJJ1 Gm24109-201ENSMUST00000175489 103 ntBASIC29.99■■■□□ 2.39
Gm44973A0A140LJJ1 Gm15042-201ENSMUST00000120212 883 ntBASIC29.76■■■□□ 2.35
Gm44973A0A140LJJ1 Psd-208ENSMUST00000224556 2034 ntBASIC29.63■■■□□ 2.33
Gm44973A0A140LJJ1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Gm44973A0A140LJJ1 Gm15045-201ENSMUST00000117359 883 ntBASIC29.25■■■□□ 2.27
Gm44973A0A140LJJ1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Gm44973A0A140LJJ1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Gm44973A0A140LJJ1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Gm44973A0A140LJJ1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Gm44973A0A140LJJ1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.81■■■□□ 2.2
Gm44973A0A140LJJ1 Gm23366-201ENSMUST00000175022 89 ntBASIC28.72■■■□□ 2.19
Gm44973A0A140LJJ1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Gm44973A0A140LJJ1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Gm44973A0A140LJJ1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Gm44973A0A140LJJ1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gm44973A0A140LJJ1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Gm44973A0A140LJJ1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Gm44973A0A140LJJ1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Gm44973A0A140LJJ1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Gm44973A0A140LJJ1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gm44973A0A140LJJ1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Gm44973A0A140LJJ1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Gm44973A0A140LJJ1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm44973A0A140LJJ1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.09■■■□□ 2.09
Gm44973A0A140LJJ1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28■■■□□ 2.07
Gm44973A0A140LJJ1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Gm44973A0A140LJJ1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
Gm44973A0A140LJJ1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Gm44973A0A140LJJ1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.8■■■□□ 2.04
Gm44973A0A140LJJ1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Gm44973A0A140LJJ1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Gm44973A0A140LJJ1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Gm44973A0A140LJJ1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.67■■■□□ 2.02
Gm44973A0A140LJJ1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Gm44973A0A140LJJ1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Gm44973A0A140LJJ1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Gm44973A0A140LJJ1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.56■■■□□ 2
Gm44973A0A140LJJ1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Gm44973A0A140LJJ1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Gm44973A0A140LJJ1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Gm44973A0A140LJJ1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.33■■□□□ 1.97
Gm44973A0A140LJJ1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm44973A0A140LJJ1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Gm44973A0A140LJJ1 Gm25238-201ENSMUST00000174914 89 ntBASIC27.25■■□□□ 1.95
Gm44973A0A140LJJ1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Gm44973A0A140LJJ1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.17■■□□□ 1.94
Gm44973A0A140LJJ1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.08■■□□□ 1.93
Gm44973A0A140LJJ1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27■■□□□ 1.91
Gm44973A0A140LJJ1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Gm44973A0A140LJJ1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Gm44973A0A140LJJ1 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.94■■□□□ 1.9
Gm44973A0A140LJJ1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Gm44973A0A140LJJ1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Gm44973A0A140LJJ1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Gm44973A0A140LJJ1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
Gm44973A0A140LJJ1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Gm44973A0A140LJJ1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Gm44973A0A140LJJ1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.62■■□□□ 1.85
Gm44973A0A140LJJ1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Gm44973A0A140LJJ1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Gm44973A0A140LJJ1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Gm44973A0A140LJJ1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Gm44973A0A140LJJ1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Gm44973A0A140LJJ1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.43■■□□□ 1.82
Gm44973A0A140LJJ1 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.41■■□□□ 1.82
Gm44973A0A140LJJ1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.39■■□□□ 1.82
Gm44973A0A140LJJ1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Gm44973A0A140LJJ1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Gm44973A0A140LJJ1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.37■■□□□ 1.81
Gm44973A0A140LJJ1 Gm25262-201ENSMUST00000174934 133 ntBASIC26.33■■□□□ 1.81
Gm44973A0A140LJJ1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
Gm44973A0A140LJJ1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Gm44973A0A140LJJ1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Gm44973A0A140LJJ1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Gm44973A0A140LJJ1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Gm44973A0A140LJJ1 Gm27325-201ENSMUST00000175467 74 ntBASIC26.17■■□□□ 1.78
Gm44973A0A140LJJ1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.15■■□□□ 1.78
Gm44973A0A140LJJ1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Gm44973A0A140LJJ1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Gm44973A0A140LJJ1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.13■■□□□ 1.77
Gm44973A0A140LJJ1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Gm44973A0A140LJJ1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Gm44973A0A140LJJ1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Gm44973A0A140LJJ1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Gm44973A0A140LJJ1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.93■■□□□ 1.74
Gm44973A0A140LJJ1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Gm44973A0A140LJJ1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Gm44973A0A140LJJ1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Gm44973A0A140LJJ1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.88■■□□□ 1.73
Gm44973A0A140LJJ1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Gm44973A0A140LJJ1 Gm26115-201ENSMUST00000175605 87 ntBASIC25.81■■□□□ 1.72
Gm44973A0A140LJJ1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Gm44973A0A140LJJ1 Rab21-202ENSMUST00000218831 843 ntBASIC25.77■■□□□ 1.72
Gm44973A0A140LJJ1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms