RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Rhox8Q6VSS7 320 aa27,03■■□□□ 1,92
Ubr3-201ENSMUST00000055758 Cngb1E1AZ71 1325 aa25,57■■□□□ 1,68
Ubr3-201ENSMUST00000055758 Rpgrip1Q9EPQ2 1331 aa25,51■■□□□ 1,67
Ubr3-201ENSMUST00000055758 Pelp1Q9DBD5 1123 aaKnown RBP25,41■■□□□ 1,66
Ubr3-201ENSMUST00000055758 Ehmt2Q9Z148 1263 aaKnown RBP25,34■■□□□ 1,65
Ubr3-201ENSMUST00000055758 Las1lA2BE28 776 aaKnown RBP25,25■■□□□ 1,63
Ubr3-201ENSMUST00000055758 Amer1Q7TS75 1132 aa25,11■■□□□ 1,61
Ubr3-201ENSMUST00000055758 Wdr66E9Q743 1299 aa24,73■■□□□ 1,55
Ubr3-201ENSMUST00000055758 Zeb1Q64318 1117 aa24,48■■□□□ 1,51
Ubr3-201ENSMUST00000055758 4930567H17RikQ3V0K5 233 aa24,3■■□□□ 1,48
Ubr3-201ENSMUST00000055758 Ube2uB1AUC4 352 aa24,14■■□□□ 1,45
Ubr3-201ENSMUST00000055758 CenpbP27790 599 aa23,93■■□□□ 1,42
Ubr3-201ENSMUST00000055758 Ttbk1Q6PCN3 1308 aa23,88■■□□□ 1,41
Ubr3-201ENSMUST00000055758 Ccdc136Q3TVA9 1136 aa23,85■■□□□ 1,41
Ubr3-201ENSMUST00000055758 Gab3Q8BSM5 595 aa23,72■■□□□ 1,39
Ubr3-201ENSMUST00000055758 Esf1Q3V1V3 845 aaKnown RBP23,67■■□□□ 1,38
Ubr3-201ENSMUST00000055758 Slc24a1Q91WD8 1130 aa23,48■■□□□ 1,35
Ubr3-201ENSMUST00000055758 4933416C03RikQ3V063 378 aa23,42■■□□□ 1,34
Ubr3-201ENSMUST00000055758 Npm2Q80W85 207 aa23,4■■□□□ 1,34
Ubr3-201ENSMUST00000055758 Myt1lP97500 1187 aa23,37■■□□□ 1,33
Ubr3-201ENSMUST00000055758 Acin1Q9JIX8 1338 aaKnown RBP23,3■■□□□ 1,32
Ubr3-201ENSMUST00000055758 Stra8P70278 393 aa23,23■■□□□ 1,31
Ubr3-201ENSMUST00000055758 Trim41Q5NCC3 630 aa23,15■■□□□ 1,3
Ubr3-201ENSMUST00000055758 UbtfP25976 765 aaKnown RBP23,11■■□□□ 1,29
Ubr3-201ENSMUST00000055758 NefmP08553 848 aa23,06■■□□□ 1,28
Ubr3-201ENSMUST00000055758 Myt1Q8CFC2 1127 aa22,97■■□□□ 1,27
Ubr3-201ENSMUST00000055758 Cdk11bP24788 784 aaKnown RBP22,97■■□□□ 1,27
Ubr3-201ENSMUST00000055758 Pcgf6Q99NA9 353 aa22,89■■□□□ 1,25
Ubr3-201ENSMUST00000055758 Eif5bQ05D44 1216 aaKnown RBP22,73■■□□□ 1,23
Ubr3-201ENSMUST00000055758 Ppargc1bQ8VHJ7 1014 aa22,68■■□□□ 1,22
Ubr3-201ENSMUST00000055758 Nop58Q6DFW4 536 aaKnown RBP22,65■■□□□ 1,22
Ubr3-201ENSMUST00000055758 NeflP08551 543 aa22,65■■□□□ 1,22
Ubr3-201ENSMUST00000055758 HrcG5E8J6 738 aa22,61■■□□□ 1,21
Ubr3-201ENSMUST00000055758 Tnnt3Q9QZ47 272 aa22,59■■□□□ 1,21
Ubr3-201ENSMUST00000055758 NrdcQ8BHG1 1161 aa22,58■■□□□ 1,21
Ubr3-201ENSMUST00000055758 Neurod1Q60867 357 aa22,47■■□□□ 1,19
Ubr3-201ENSMUST00000055758 DiexfQ8BTT6 772 aaKnown RBP22,46■■□□□ 1,19
Ubr3-201ENSMUST00000055758 Supt5hO55201 1082 aaKnown RBP22,41■■□□□ 1,18
Ubr3-201ENSMUST00000055758 NclP09405 707 aaKnown RBP22,41■■□□□ 1,18
Ubr3-201ENSMUST00000055758 Ccdc180J3QNE4 1664 aa22,4■■□□□ 1,18
Ubr3-201ENSMUST00000055758 Anp32bQ9EST5 272 aaKnown RBP22,35■■□□□ 1,17
Ubr3-201ENSMUST00000055758 Rtl5Q5DTT4 599 aa22,28■■□□□ 1,16
Ubr3-201ENSMUST00000055758 Fam50aQ9WV03 339 aaKnown RBP22,26■■□□□ 1,15
Ubr3-201ENSMUST00000055758 Rtl1Q7M732 1744 aa22,25■■□□□ 1,15
Ubr3-201ENSMUST00000055758 CatipB9EKE5 520 aa22,22■■□□□ 1,15
Ubr3-201ENSMUST00000055758 DaxxO35613 739 aa22,18■■□□□ 1,14
Ubr3-201ENSMUST00000055758 Ap3b1Q9Z1T1 1105 aa22,15■■□□□ 1,14
Ubr3-201ENSMUST00000055758 Os9Q8K2C7 672 aa22,12■■□□□ 1,13
Ubr3-201ENSMUST00000055758 TonslQ6NZL6 1363 aa22,04■■□□□ 1,12
Ubr3-201ENSMUST00000055758 Il27Q8K3I6 234 aa22,04■■□□□ 1,12
Ubr3-201ENSMUST00000055758 Ythdc1E9Q5K9 736 aaKnown RBP21,95■■□□□ 1,1
Ubr3-201ENSMUST00000055758 Gm38655A0A286YDK6 273 aa21,93■■□□□ 1,1
Ubr3-201ENSMUST00000055758 Anp32aO35381 247 aa21,91■■□□□ 1,1
Ubr3-201ENSMUST00000055758 NischQ80TM9 1593 aa21,91■■□□□ 1,1
Ubr3-201ENSMUST00000055758 Lmod3E9QA62 571 aa21,88■■□□□ 1,09
Ubr3-201ENSMUST00000055758 ArxO35085 564 aa21,8■■□□□ 1,08
Ubr3-201ENSMUST00000055758 Mier1Q5UAK0 511 aa21,76■■□□□ 1,07
Ubr3-201ENSMUST00000055758 Csrnp3P59055 597 aa21,69■■□□□ 1,06
Ubr3-201ENSMUST00000055758 Mapk8ip2Q9ERE9 830 aa21,64■■□□□ 1,05
Ubr3-201ENSMUST00000055758 ClspnQ80YR7 1315 aa21,61■■□□□ 1,05
Ubr3-201ENSMUST00000055758 Zbtb7cQ8VCZ7 619 aa21,61■■□□□ 1,05
Ubr3-201ENSMUST00000055758 Chic1Q8CBW7 227 aa21,59■■□□□ 1,05
Ubr3-201ENSMUST00000055758 Zbtb4Q5F293 982 aa21,55■■□□□ 1,04
Ubr3-201ENSMUST00000055758 Polr3glQ8R0C0 218 aa21,54■■□□□ 1,04
Ubr3-201ENSMUST00000055758 Upf2A2AT37 1269 aaKnown RBP21,53■■□□□ 1,04
Ubr3-201ENSMUST00000055758 Prdm10Q3UTQ7 1184 aa21,41■■□□□ 1,02
Ubr3-201ENSMUST00000055758 Nlrp6Q91WS2 869 aa21,4■■□□□ 1,02
Ubr3-201ENSMUST00000055758 Ppp4r2Q0VGB7 417 aa21,37■■□□□ 1,01
Ubr3-201ENSMUST00000055758 Anks4bQ8K3X6 423 aa21,36■■□□□ 1,01
Ubr3-201ENSMUST00000055758 Hnrnpul2Q00PI9 745 aaKnown RBP21,34■■□□□ 1,01
Ubr3-201ENSMUST00000055758 Plekhg3Q4VAC9 1341 aa21,33■■□□□ 1
Ubr3-201ENSMUST00000055758 Hsp90aa1P07901 733 aaKnown RBP21,32■■□□□ 1
Ubr3-201ENSMUST00000055758 Lmod2Q3UHZ5 550 aa21,31■■□□□ 1
Ubr3-201ENSMUST00000055758 Aplp2Q06335 707 aa21,28■■□□□ 1
Ubr3-201ENSMUST00000055758 Rangap1P46061 589 aaKnown RBP21,25■□□□□ 0,99
Ubr3-201ENSMUST00000055758 Calr4Q3TQS0 420 aa21,24■□□□□ 0,99
Ubr3-201ENSMUST00000055758 Sall2Q9QX96 1004 aa21,24■□□□□ 0,99
Ubr3-201ENSMUST00000055758 Vsig10D3YX43 558 aa21,2■□□□□ 0,98
Ubr3-201ENSMUST00000055758 Eid3Q3V124 375 aa21,2■□□□□ 0,98
Ubr3-201ENSMUST00000055758 Zcchc6Q5BLK4 1491 aaKnown RBP21,18■□□□□ 0,98
Ubr3-201ENSMUST00000055758 Erich6D3Z6S9 713 aa21,16■□□□□ 0,98
Ubr3-201ENSMUST00000055758 DekQ7TNV0 380 aaKnown RBP21,16■□□□□ 0,98
Ubr3-201ENSMUST00000055758 Atp1b4Q99ME6 356 aa21,15■□□□□ 0,98
Ubr3-201ENSMUST00000055758 Trim44Q9QXA7 346 aa21,1■□□□□ 0,97
Ubr3-201ENSMUST00000055758 Gm13697A2AK42 830 aa21,1■□□□□ 0,97
Ubr3-201ENSMUST00000055758 Wdr43Q6ZQL4 677 aaKnown RBP21,03■□□□□ 0,96
Ubr3-201ENSMUST00000055758 Rad21Q61550 635 aaKnown RBP21,02■□□□□ 0,96
Ubr3-201ENSMUST00000055758 Ifnlr1Q8CGK5 535 aa20,96■□□□□ 0,95
Ubr3-201ENSMUST00000055758 Fam71e1A1L3C1 212 aa20,94■□□□□ 0,94
Ubr3-201ENSMUST00000055758 Ccdc9Q8VC31 543 aaKnown RBP20,92■□□□□ 0,94
Ubr3-201ENSMUST00000055758 Znf316Q6PGE4 1016 aa20,91■□□□□ 0,94
Ubr3-201ENSMUST00000055758 CanxP35564 591 aaKnown RBP20,83■□□□□ 0,93
Ubr3-201ENSMUST00000055758 Arid4bA2CG63 1314 aaKnown RBP20,82■□□□□ 0,92
Ubr3-201ENSMUST00000055758 1700123L14RikQ3V2K7 440 aa20,81■□□□□ 0,92
Ubr3-201ENSMUST00000055758 Gm35339A0A140LHH9 1649 aa20,81■□□□□ 0,92
Ubr3-201ENSMUST00000055758 Gm13695A2AK44 830 aa20,8■□□□□ 0,92
Ubr3-201ENSMUST00000055758 Hsp90ab1P11499 724 aaKnown RBP20,78■□□□□ 0,92
Ubr3-201ENSMUST00000055758 Mrs2Q5NCE8 434 aa20,76■□□□□ 0,91
Ubr3-201ENSMUST00000055758 PtmaP26350 111 aa20,75■□□□□ 0,91
Ubr3-201ENSMUST00000055758 Trim30dE9PWL0 497 aa20,74■□□□□ 0,91
Retrieved 100 of 22,080 RNA–protein pairs in 36,7 ms