RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gata2O09100 480 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 NdpP48744 131 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv3-9A0A140T8P4 119 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Prr19B2RW88 366 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Zfp648D3Z0W3 525 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 CckP09240 115 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Zg16Q8K0C5 167 aa11.85□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gm26727M0QWT1 121 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Pfn1P62962 140 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv4-80A0A075B5L7 116 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Shisa9Q9CZN4 424 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Q8BTC1 67 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Igkv4-81A0A0G2JEY5 119 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Iglv3A0A0B4J1K5 122 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Gm10188Q3V432 135 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Q8VC23 124 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 LenepQ9WVB6 61 aa11.84□□□□□ -0.51
Col7a1-201ENSMUST00000026740 Cdkn1aP39689 159 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Cd200r1lQ6XJV6 249 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Plpp2Q9DAX2 276 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Dand5Q76LW6 185 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Trav4n-4A0A075B615 110 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ighv7-2A0A0A6YX91 119 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Efna4O08542 206 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Gm10020E9QAZ2 204 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Grem1O70326 184 aa11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Rpl15Q9CZM2 204 aaKnown RBP11.83□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Fam19a2Q7TPG7 131 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Reg4Q9D8G5 157 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 B230307C23RikQ8BLB2 64 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 A730015C16RikQ8C992 119 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv8-34A0A0G2JDU0 121 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 P01724 129 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 SpinklQ8CEK3 90 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Tns1E9Q0S6 1888 aaKnown RBP11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 H2al1nQ497L1 109 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv4-72A0A0B4J1I4 117 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Pygo1Q9D0P5 417 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Col4a1P02463 1669 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ndufa11Q9D8B4 141 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ighv5-12-4A0A0A6YWG4 117 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 BmperQ8CJ69 685 aa11.82□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Gm11020F6ZGD5 61 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 AgerQ62151 402 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Tal2Q62282 108 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Psmb11Q8BG41 302 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Cdcp2Q8BQH6 427 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 P18526 117 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ccl12Q62401 104 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Plscr4P58196 326 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 SlpiP97430 131 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 ApohQ01339 345 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Hist2h2beQ64524 126 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Reg3dQ9QUS9 175 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Cxcl13O55038 109 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 EpopQ7TNS8 369 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Rnf126Q91YL2 313 aa11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Klf2Q60843 354 aaKnown RBP11.81□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv14-126A0A075B5K0 117 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Iglc2P01844 104 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Defb30Q30KN4 75 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Gpx1P11352 201 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Spata46Q4FZF2 204 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ttc9cQ810A3 171 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Timm10bQ9WV96 100 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ighv1-39A0A075B5V5 117 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Rnf217D3YYI7 515 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Csrp1P97315 193 aaKnown RBP11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 BC035044E0CXF8 138 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 H1fxQ80ZM5 188 aa11.8□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Trav14d-1A0A075B6B1 121 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv4-61A0A0G2JH00 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Foxi3E0CZH3 425 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ndufa1O35683 70 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv4-59A0A0B4J1I8 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ankrd39Q9D2X0 183 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ighv1-81A0A075B5Y4 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Rasl10aQ8K5A4 203 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv4-54A0A0G2JES9 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Csrp3P50462 194 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Rs1Q9Z1L4 224 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Igkv4-63A0A0G2JFU6 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 P01638 115 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Tcl1b2P56841 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Olfr211Q8VGH2 309 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Parm1Q923D3 296 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 RetnlgQ8K426 117 aa11.79□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Trav7-2Q5R1I3 112 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 BB014433Q8C5R5 389 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Foxi1Q922I5 372 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Pip4p2Q9CZX7 257 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Gm20219A0A1B0GRQ3 87 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Gkn1Q9CR36 201 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 PigyP0C1P0 71 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Gm13090A2A899 111 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Shisal2aA2A9G7 189 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 P01811 117 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Ighv1-80A0A075B5Y3 117 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Trav6d-7A0A075B6B0 112 aa11.78□□□□□ -0.52
Col7a1-201ENSMUST00000026740 Znf319Q9ERR8 581 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 79.7 ms