RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm21900J3QP38 180 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Cdkn1bP46414 197 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr127Q8VF25 323 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 LfngO09010 378 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 P04940 107 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 P04941 107 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Phxr2P15972 65 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 A930003A15RikQ3U552 87 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Tbr1Q64336 681 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr996Q7TRA0 314 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Lrfn3Q8BLY3 626 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Znf146Q8BQN6 292 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Ss18l1Q8BW22 402 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Rgs13Q8K443 158 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 SelenokQ9JLJ1 94 aa9.36□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr1436A0PK57 315 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Rab33bO35963 229 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr1419Q7TQS2 343 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Oxld1Q9CR10 201 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Tax1bp3Q9DBG9 124 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Psmb2Q9R1P3 201 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Muc4Q8JZM8 3443 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Slc25a17O70579 307 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Hoxa1P09022 331 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Cd3eP22646 189 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 SelplgQ62170 397 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 COA4Q8BT51 87 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Znf641Q8BZ34 422 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr982Q8VGB3 321 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr961Q9EQ84 314 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Dolpp1Q9JMF7 238 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Lrrk2Q5S006 2527 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 SlpiP97430 131 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 AsipQ03288 131 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Tnfsf18Q7TS55 173 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Ap5s1Q9D742 170 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Col13a1Q9R1N9 751 aa9.35□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Zfp109A0A0U1RPC5 652 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 P01759 136 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 StumQ0VBF8 141 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Gm5468Q8C3D3 155 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Vmn1r202Q8R259 302 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr218E9PWV2 313 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Gm21913J3KML9 361 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Gm21776J3QPJ5 361 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Rpl27aP14115 148 aaKnown RBP9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 CebpdQ00322 268 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Gng7Q61016 68 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Isg15Q64339 161 aaKnown RBP9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Ifna14Q810G3 189 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Siglec12Q91Y57 467 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Ssbp1Q9CYR0 152 aaKnown RBP9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Psmg3Q9CZH3 122 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Olfr954Q9EQB6 314 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Rnase4Q9JJH1 148 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Trappc2lQ9JME7 139 aa9.34□□□□□ -0.91
Col9a1-202ENSMUST00000088349 Igkv19-93A0A0G2JFZ3 115 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Olfr1331K7N684 317 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 P18530 117 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Q08AU9 97 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 5730522E02RikQ5SP45 163 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Cd33Q63994 403 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Olfr1333Q7TQV7 317 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Rnd1Q8BLR7 232 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Vps25Q9CQ80 176 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Ighv1-39A0A075B5V5 117 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Cldn1O88551 211 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 IappP12968 93 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Trav6-2Q5R1I4 113 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Dtx1Q61010 627 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Olfr1535Q7TQU0 326 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Rbfox2Q8BP71 449 aaKnown RBP9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Eda2rQ8BX35 297 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Gm9944Q8C559 102 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 F5O88783 2183 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Gm36368A0A1D5RLK8 91 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Olfr869E9PX82 323 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Gm5093E9PZB3 174 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Gm3072F6SKY8 209 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 P01630 113 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Pmis2Q497Q9 96 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Trav6d-4Q5R1I0 115 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Tmem204Q7TQI0 226 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Olfr411Q7TRW8 315 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Hcfc2Q9D968 241 aa9.33□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Zfyve26Q5DU37 2529 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Trav5-1A0A075B5Z7 114 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Trav3n-3A0A0G2JEM0 114 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 P18532 116 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Nat8f4G5E8L3 226 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Pex7P97865 318 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Neil2Q6R2P8 329 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Olfr1434Q7TQR9 312 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Ifna12Q80SS5 189 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Fhl4Q8CDC8 279 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Q9D7E4 109 aa9.32□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Trav9-1A0A075B601 112 aa9.31□□□□□ -0.92
Col9a1-202ENSMUST00000088349 P04942 107 aa9.31□□□□□ -0.92
Col9a1-202ENSMUST00000088349 Ccl11P48298 97 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms