Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Gm25239-201ENSMUST00000174915 86 ntBASIC36.37■■■■□ 3.41
Tbr1Q64336 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.82■■■■□ 3
Tbr1Q64336 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Tbr1Q64336 Gm24109-201ENSMUST00000175489 103 ntBASIC31.72■■■□□ 2.67
Tbr1Q64336 Gm15042-201ENSMUST00000120212 883 ntBASIC31.39■■■□□ 2.62
Tbr1Q64336 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Tbr1Q64336 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Tbr1Q64336 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Tbr1Q64336 Gm15045-201ENSMUST00000117359 883 ntBASIC30.6■■■□□ 2.49
Tbr1Q64336 Gm23366-201ENSMUST00000175022 89 ntBASIC30.33■■■□□ 2.45
Tbr1Q64336 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Tbr1Q64336 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.73■■■□□ 2.35
Tbr1Q64336 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.46■■■□□ 2.31
Tbr1Q64336 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.42■■■□□ 2.3
Tbr1Q64336 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Tbr1Q64336 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Tbr1Q64336 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Tbr1Q64336 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Tbr1Q64336 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Tbr1Q64336 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Tbr1Q64336 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.89■■■□□ 2.22
Tbr1Q64336 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Tbr1Q64336 Gm25238-201ENSMUST00000174914 89 ntBASIC28.84■■■□□ 2.21
Tbr1Q64336 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Tbr1Q64336 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tbr1Q64336 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
Tbr1Q64336 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tbr1Q64336 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Tbr1Q64336 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tbr1Q64336 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Tbr1Q64336 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.05■■■□□ 2.08
Tbr1Q64336 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Tbr1Q64336 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
Tbr1Q64336 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.87■■■□□ 2.05
Tbr1Q64336 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.87■■■□□ 2.05
Tbr1Q64336 Gm25262-201ENSMUST00000174934 133 ntBASIC27.86■■■□□ 2.05
Tbr1Q64336 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tbr1Q64336 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Tbr1Q64336 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Tbr1Q64336 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.61■■■□□ 2.01
Tbr1Q64336 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.59■■■□□ 2.01
Tbr1Q64336 Gm27325-201ENSMUST00000175467 74 ntBASIC27.43■■□□□ 1.98
Tbr1Q64336 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.43■■□□□ 1.98
Tbr1Q64336 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.38■■□□□ 1.97
Tbr1Q64336 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Tbr1Q64336 Gm26115-201ENSMUST00000175605 87 ntBASIC27.33■■□□□ 1.97
Tbr1Q64336 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.28■■□□□ 1.96
Tbr1Q64336 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Tbr1Q64336 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tbr1Q64336 Rab21-202ENSMUST00000218831 843 ntBASIC27.2■■□□□ 1.94
Tbr1Q64336 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.19■■□□□ 1.94
Tbr1Q64336 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Tbr1Q64336 Gm8109-201ENSMUST00000194076 746 ntBASIC27.11■■□□□ 1.93
Tbr1Q64336 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Tbr1Q64336 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Tbr1Q64336 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Tbr1Q64336 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Tbr1Q64336 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Tbr1Q64336 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tbr1Q64336 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Tbr1Q64336 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.93■■□□□ 1.9
Tbr1Q64336 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Tbr1Q64336 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.82■■□□□ 1.88
Tbr1Q64336 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.76■■□□□ 1.87
Tbr1Q64336 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.7■■□□□ 1.86
Tbr1Q64336 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Tbr1Q64336 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Tbr1Q64336 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Tbr1Q64336 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Tbr1Q64336 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tbr1Q64336 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.47■■□□□ 1.83
Tbr1Q64336 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.42■■□□□ 1.82
Tbr1Q64336 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Tbr1Q64336 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.42■■□□□ 1.82
Tbr1Q64336 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Tbr1Q64336 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Tbr1Q64336 Psd-208ENSMUST00000224556 2034 ntBASIC26.39■■□□□ 1.82
Tbr1Q64336 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Tbr1Q64336 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.31■■□□□ 1.8
Tbr1Q64336 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tbr1Q64336 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.27■■□□□ 1.8
Tbr1Q64336 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
Tbr1Q64336 Gm24804-201ENSMUST00000174982 85 ntBASIC26.19■■□□□ 1.78
Tbr1Q64336 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.13■■□□□ 1.77
Tbr1Q64336 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.11■■□□□ 1.77
Tbr1Q64336 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Tbr1Q64336 Gm27322-201ENSMUST00000184007 104 ntBASIC26.09■■□□□ 1.77
Tbr1Q64336 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tbr1Q64336 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Tbr1Q64336 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.01■■□□□ 1.75
Tbr1Q64336 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Tbr1Q64336 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Tbr1Q64336 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Tbr1Q64336 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.94■■□□□ 1.74
Tbr1Q64336 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.94■■□□□ 1.74
Tbr1Q64336 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Tbr1Q64336 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Tbr1Q64336 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Tbr1Q64336 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tbr1Q64336 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms