Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Gm25239-201ENSMUST00000174915 86 ntBASIC31.94■■■□□ 2.7
Rpl13a-ps1A0A140T8K2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Rpl13a-ps1A0A140T8K2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rpl13a-ps1A0A140T8K2 Gm15042-201ENSMUST00000120212 883 ntBASIC27.82■■■□□ 2.04
Rpl13a-ps1A0A140T8K2 Gm24109-201ENSMUST00000175489 103 ntBASIC27.74■■■□□ 2.03
Rpl13a-ps1A0A140T8K2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rpl13a-ps1A0A140T8K2 Gm15045-201ENSMUST00000117359 883 ntBASIC27.09■■□□□ 1.93
Rpl13a-ps1A0A140T8K2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rpl13a-ps1A0A140T8K2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Rpl13a-ps1A0A140T8K2 Gm23366-201ENSMUST00000175022 89 ntBASIC26.76■■□□□ 1.87
Rpl13a-ps1A0A140T8K2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rpl13a-ps1A0A140T8K2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpl13a-ps1A0A140T8K2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpl13a-ps1A0A140T8K2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpl13a-ps1A0A140T8K2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.89■■□□□ 1.74
Rpl13a-ps1A0A140T8K2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Rpl13a-ps1A0A140T8K2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
Rpl13a-ps1A0A140T8K2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.65■■□□□ 1.7
Rpl13a-ps1A0A140T8K2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rpl13a-ps1A0A140T8K2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rpl13a-ps1A0A140T8K2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Rpl13a-ps1A0A140T8K2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.39■■□□□ 1.66
Rpl13a-ps1A0A140T8K2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rpl13a-ps1A0A140T8K2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpl13a-ps1A0A140T8K2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rpl13a-ps1A0A140T8K2 Gm25238-201ENSMUST00000174914 89 ntBASIC25.2■■□□□ 1.62
Rpl13a-ps1A0A140T8K2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.14■■□□□ 1.61
Rpl13a-ps1A0A140T8K2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpl13a-ps1A0A140T8K2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rpl13a-ps1A0A140T8K2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rpl13a-ps1A0A140T8K2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
Rpl13a-ps1A0A140T8K2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpl13a-ps1A0A140T8K2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rpl13a-ps1A0A140T8K2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.74■■□□□ 1.55
Rpl13a-ps1A0A140T8K2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rpl13a-ps1A0A140T8K2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpl13a-ps1A0A140T8K2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpl13a-ps1A0A140T8K2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Rpl13a-ps1A0A140T8K2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.59■■□□□ 1.53
Rpl13a-ps1A0A140T8K2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.59■■□□□ 1.53
Rpl13a-ps1A0A140T8K2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rpl13a-ps1A0A140T8K2 Gm25262-201ENSMUST00000174934 133 ntBASIC24.37■■□□□ 1.49
Rpl13a-ps1A0A140T8K2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.35■■□□□ 1.49
Rpl13a-ps1A0A140T8K2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpl13a-ps1A0A140T8K2 Gm27325-201ENSMUST00000175467 74 ntBASIC24.32■■□□□ 1.48
Rpl13a-ps1A0A140T8K2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpl13a-ps1A0A140T8K2 Psd-208ENSMUST00000224556 2034 ntBASIC24.27■■□□□ 1.48
Rpl13a-ps1A0A140T8K2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rpl13a-ps1A0A140T8K2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.21■■□□□ 1.47
Rpl13a-ps1A0A140T8K2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.07■■□□□ 1.44
Rpl13a-ps1A0A140T8K2 Rab21-202ENSMUST00000218831 843 ntBASIC24.05■■□□□ 1.44
Rpl13a-ps1A0A140T8K2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rpl13a-ps1A0A140T8K2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rpl13a-ps1A0A140T8K2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24■■□□□ 1.43
Rpl13a-ps1A0A140T8K2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rpl13a-ps1A0A140T8K2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.93■■□□□ 1.42
Rpl13a-ps1A0A140T8K2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rpl13a-ps1A0A140T8K2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.86■■□□□ 1.41
Rpl13a-ps1A0A140T8K2 Gm26115-201ENSMUST00000175605 87 ntBASIC23.83■■□□□ 1.41
Rpl13a-ps1A0A140T8K2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.83■■□□□ 1.41
Rpl13a-ps1A0A140T8K2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rpl13a-ps1A0A140T8K2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Rpl13a-ps1A0A140T8K2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rpl13a-ps1A0A140T8K2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpl13a-ps1A0A140T8K2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rpl13a-ps1A0A140T8K2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
Rpl13a-ps1A0A140T8K2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpl13a-ps1A0A140T8K2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rpl13a-ps1A0A140T8K2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rpl13a-ps1A0A140T8K2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
Rpl13a-ps1A0A140T8K2 Gm8109-201ENSMUST00000194076 746 ntBASIC23.58■■□□□ 1.37
Rpl13a-ps1A0A140T8K2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.54■■□□□ 1.36
Rpl13a-ps1A0A140T8K2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rpl13a-ps1A0A140T8K2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.52■■□□□ 1.36
Rpl13a-ps1A0A140T8K2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.5■■□□□ 1.35
Rpl13a-ps1A0A140T8K2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.46■■□□□ 1.35
Rpl13a-ps1A0A140T8K2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rpl13a-ps1A0A140T8K2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Rpl13a-ps1A0A140T8K2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rpl13a-ps1A0A140T8K2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rpl13a-ps1A0A140T8K2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rpl13a-ps1A0A140T8K2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpl13a-ps1A0A140T8K2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Rpl13a-ps1A0A140T8K2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rpl13a-ps1A0A140T8K2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rpl13a-ps1A0A140T8K2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Rpl13a-ps1A0A140T8K2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.23■■□□□ 1.31
Rpl13a-ps1A0A140T8K2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpl13a-ps1A0A140T8K2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.19■■□□□ 1.3
Rpl13a-ps1A0A140T8K2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpl13a-ps1A0A140T8K2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpl13a-ps1A0A140T8K2 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.17■■□□□ 1.3
Rpl13a-ps1A0A140T8K2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rpl13a-ps1A0A140T8K2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpl13a-ps1A0A140T8K2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rpl13a-ps1A0A140T8K2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpl13a-ps1A0A140T8K2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpl13a-ps1A0A140T8K2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.06■■□□□ 1.28
Rpl13a-ps1A0A140T8K2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rpl13a-ps1A0A140T8K2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms