RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	ARO80	Q04052	950 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	BCP1	Q06338	283 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	NSE1	Q07913	336 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	APC9	Q12107	265 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	RRP36	Q12481	300 aa	Predicted RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	CHS1	P08004	1131 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	ERR1	P0CX10	437 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	ERR2	P0CX11	437 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	VMA2	P16140	517 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	ADY2	P25613	283 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	SPT16	P32558	1035 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	SRB2	P34162	210 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	SLM4	P38247	162 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	NMD3	P38861	518 aa	Known RBP	4.04	□□□□□ -1.76
NCR1	YPL006W	MND2	P40577	368 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	ERR3	P42222	437 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	VTC4	P47075	721 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	SLG1	P54867	378 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	ULP1	Q02724	621 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	ENT4	Q07872	247 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YPR027C	Q12079	277 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	YLL058W	Q12198	575 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	VPS5	Q92331	675 aa		4.04	□□□□□ -1.76
NCR1	YPL006W	UBR2	Q07963	1872 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	VBA3	P25594	458 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	URA10	P30402	227 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	TFC1	P32367	649 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	SRP101	P32916	621 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	VBA5	P36172	582 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	NOP4	P37838	685 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	AVT2	P39981	480 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	RRN7	P40992	514 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	TEL2	P53038	688 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	COG2	P53271	262 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	BUD32	P53323	261 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	HST2	P53686	357 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	YNL058C	P53947	316 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	SLD5	Q03406	294 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	GLO2	Q05584	274 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	YLR455W	Q06188	304 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	YMR030W-A	Q3E760	96 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	RGS2	Q99188	309 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	TOM1	Q03280	3268 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	CDC19	P00549	500 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	SAT4	P25333	603 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	PRR1	P28708	518 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	PMI40	P29952	429 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	UTR2	P32623	467 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	LHS1	P36016	881 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	RDH54	P38086	958 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	LYS9	P38999	446 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	VAB2	P40003	282 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	RPT2	P40327	437 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	RFX1	P48743	811 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	ALT1	P52893	592 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	FPK1	P53739	893 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	ASI2	P53895	289 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	MCH5	Q08777	521 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	HRT3	Q12347	344 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	AI5_ALPHA	Q9ZZX1	630 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
NCR1	YPL006W	RRP14	P36080	434 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	AIM18	P38884	321 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	NOP9	P47077	666 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	ACF4	P47129	309 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	ASN2	P49090	572 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	SCS3	P53012	380 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	YGR283C	P53336	341 aa	Predicted RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	ADE12	P80210	433 aa	Known RBP	4.03	□□□□□ -1.76
NCR1	YPL006W	YDR461C-A	Q2V2P7	80 aa		4.03	□□□□□ -1.76
NCR1	YPL006W	STE2	D6VTK4	431 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	AIM26	P32858	118 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	AGP2	P38090	596 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	AMN1	P38285	549 aa	Predicted RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	ATG12	P38316	186 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	RRT5	P43607	289 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	SET2	P46995	733 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	DCP2	P53550	970 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	SNU56	Q03782	492 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	CDD1	Q06549	142 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	TPO1	Q07824	586 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	SLD7	Q08457	257 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	THI21	Q08975	551 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	SBP1	P10080	294 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	INO1	P11986	533 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	RGR1	P19263	1082 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	YUR1	P26725	428 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	HRR25	P29295	494 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	NPT1	P39683	429 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	IAH1	P41734	238 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	MAF1	P41910	395 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	FMP32	P43557	207 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	BNA3	P47039	444 aa	Known RBP	4.02	□□□□□ -1.77
NCR1	YPL006W	YNL011C	P53980	444 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	ATG17	Q06410	417 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	FMP25	Q08023	583 aa		4.02	□□□□□ -1.77
NCR1	YPL006W	YPR089W	O13585	888 aa		4.01	□□□□□ -1.77
NCR1	YPL006W	ATR1	P13090	542 aa		4.01	□□□□□ -1.77
NCR1	YPL006W	VPS34	P22543	875 aa		4.01	□□□□□ -1.77
NCR1	YPL006W	VAC17	P25591	423 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms