RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB1	YMR296C	RAM1	P22007	431 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	SLY1	P22213	666 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	OXP1	P28273	1286 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	MEI4	P29467	408 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	CDC1	P40986	491 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	TFG1	P41895	735 aa	Predicted RBP	11.76	□□□□□ -0.53
LCB1	YMR296C	PSP1	P50896	841 aa	Known RBP	11.76	□□□□□ -0.53
LCB1	YMR296C	YNL040W	P53960	456 aa	Predicted RBP	11.76	□□□□□ -0.53
LCB1	YMR296C	YPL062W	Q02781	134 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	LEE1	Q02799	301 aa	Known RBP	11.76	□□□□□ -0.53
LCB1	YMR296C	YML119W	Q03208	357 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	VPS16	Q03308	798 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	GCN5	Q03330	439 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	ECM22	Q05958	814 aa	Predicted RBP	11.76	□□□□□ -0.53
LCB1	YMR296C	BSP1	Q06604	576 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	YRR1	Q12172	810 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	NDJ1	Q12366	352 aa		11.76	□□□□□ -0.53
LCB1	YMR296C	YMR085W	P0CF18	432 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	NIP1	P32497	812 aa	Known RBP	11.75	□□□□□ -0.53
LCB1	YMR296C	DSS4	P32601	143 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	SPC97	P38863	823 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	AVT2	P39981	480 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	BTT1	P40314	149 aa	Predicted RBP	11.75	□□□□□ -0.53
LCB1	YMR296C	CDC55	Q00362	526 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	NSE5	Q03718	556 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	MDM38	Q08179	573 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	AIM39	Q08223	395 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	PUT4	P15380	627 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	KAR4	P25583	335 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	MSR1	P38714	643 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	RIX1	P38883	763 aa	Predicted RBP	11.75	□□□□□ -0.53
LCB1	YMR296C	YIL054W	P40524	105 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	HLJ1	P48353	224 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	UBX4	P54730	416 aa		11.75	□□□□□ -0.53
LCB1	YMR296C	COY1	P34237	679 aa		11.74	□□□□□ -0.53
LCB1	YMR296C	YBR225W	P38321	900 aa		11.74	□□□□□ -0.53
LCB1	YMR296C	SMF2	P38778	549 aa		11.74	□□□□□ -0.53
LCB1	YMR296C	EMW1	P42842	904 aa	Known RBP	11.74	□□□□□ -0.53
LCB1	YMR296C	TMA22	P47089	198 aa	Predicted RBP	11.74	□□□□□ -0.53
LCB1	YMR296C	MTD1	Q02046	320 aa	Known RBP	11.74	□□□□□ -0.53
LCB1	YMR296C	SHE9	Q04172	456 aa		11.74	□□□□□ -0.53
LCB1	YMR296C	HRD3	Q05787	833 aa		11.74	□□□□□ -0.53
LCB1	YMR296C	MTF1	P14908	341 aa	Known RBP	11.73	□□□□□ -0.53
LCB1	YMR296C	YCR015C	P25616	317 aa		11.73	□□□□□ -0.53
LCB1	YMR296C	DAL1	P32375	460 aa		11.73	□□□□□ -0.53
LCB1	YMR296C	OAF1	P39720	1047 aa	Predicted RBP	11.73	□□□□□ -0.53
LCB1	YMR296C	SAE2	P46946	345 aa		11.73	□□□□□ -0.53
LCB1	YMR296C	YPL109C	Q02981	657 aa		11.73	□□□□□ -0.53
LCB1	YMR296C	YLR177W	Q06251	628 aa		11.73	□□□□□ -0.53
LCB1	YMR296C	ILS1	P09436	1072 aa	Known RBP	11.72	□□□□□ -0.53
LCB1	YMR296C	HXT3	P32466	567 aa	Known RBP	11.72	□□□□□ -0.53
LCB1	YMR296C	RNA1	P11745	407 aa	Known RBP	11.71	□□□□□ -0.53
LCB1	YMR296C	GAL11	P19659	1081 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	CDC20	P26309	610 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	PSE1	P32337	1089 aa	Known RBP	11.71	□□□□□ -0.53
LCB1	YMR296C	SRB2	P34162	210 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	SET3	P36124	751 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	NUP60	P39705	539 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	NMA111	P53920	997 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	KTR5	P53966	522 aa	Predicted RBP	11.71	□□□□□ -0.53
LCB1	YMR296C	ADE13	Q05911	482 aa	Known RBP	11.71	□□□□□ -0.53
LCB1	YMR296C	APC5	Q08683	685 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	AVL9	Q12500	764 aa		11.71	□□□□□ -0.53
LCB1	YMR296C	TEF1	P02994	458 aa	Known RBP	11.71	□□□□□ -0.54
LCB1	YMR296C	PPH22	P23595	377 aa		11.71	□□□□□ -0.54
LCB1	YMR296C	SPT5	P27692	1063 aa	Known RBP	11.71	□□□□□ -0.54
LCB1	YMR296C	URA7	P28274	579 aa	Known RBP	11.71	□□□□□ -0.54
LCB1	YMR296C	MVD1	P32377	396 aa	Known RBP	11.71	□□□□□ -0.54
LCB1	YMR296C	YBR053C	P38235	358 aa		11.71	□□□□□ -0.54
LCB1	YMR296C	PRK1	P40494	810 aa		11.71	□□□□□ -0.54
LCB1	YMR296C	IRC10	Q08118	586 aa		11.71	□□□□□ -0.54
LCB1	YMR296C	SSC1	P0CS90	654 aa	Known RBP	11.7	□□□□□ -0.54
LCB1	YMR296C	RGR1	P19263	1082 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	PUP3	P25451	205 aa	Known RBP	11.7	□□□□□ -0.54
LCB1	YMR296C	KIP2	P28743	706 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	ERP2	P39704	215 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	PFK26	P40433	827 aa	Known RBP	11.7	□□□□□ -0.54
LCB1	YMR296C	YNL247W	P53852	767 aa	Known RBP	11.7	□□□□□ -0.54
LCB1	YMR296C	TEP1	P53916	434 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	GTR1	Q00582	310 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	SPC24	Q04477	213 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	LCB4	Q12246	624 aa		11.7	□□□□□ -0.54
LCB1	YMR296C	HSM3	P38348	480 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	LIN1	P38852	340 aa	Predicted RBP	11.69	□□□□□ -0.54
LCB1	YMR296C	SCC4	P40090	624 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	VTC4	P47075	721 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	BUD22	Q04347	519 aa	Known RBP	11.69	□□□□□ -0.54
LCB1	YMR296C	ALR1	Q08269	859 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	VHS3	Q08438	674 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	YLR053C	Q12026	108 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	VPS5	Q92331	675 aa		11.69	□□□□□ -0.54
LCB1	YMR296C	ETR1	P38071	380 aa		11.68	□□□□□ -0.54
LCB1	YMR296C	POL12	P38121	705 aa	Predicted RBP	11.68	□□□□□ -0.54
LCB1	YMR296C	DSF2	P38213	736 aa		11.68	□□□□□ -0.54
LCB1	YMR296C	NMD3	P38861	518 aa	Known RBP	11.68	□□□□□ -0.54
LCB1	YMR296C	TAH11	P47112	604 aa		11.68	□□□□□ -0.54
LCB1	YMR296C	BIO4	P53630	237 aa		11.68	□□□□□ -0.54
LCB1	YMR296C	FAP1	P53971	965 aa		11.68	□□□□□ -0.54
LCB1	YMR296C	BET4	Q00618	327 aa		11.68	□□□□□ -0.54
LCB1	YMR296C	OSW1	Q08692	278 aa		11.68	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms