RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W PPS1P38148 807 aa1.88□□□□□ -2.11
RTP1YMR185W VHC1P38329 1120 aa1.88□□□□□ -2.11
RTP1YMR185W RRT2P38332 387 aa1.88□□□□□ -2.11
RTP1YMR185W NEM1P38757 446 aa1.88□□□□□ -2.11
RTP1YMR185W ARB1P40024 610 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W IES5P40060 125 aa1.88□□□□□ -2.11
RTP1YMR185W SCS2P40075 244 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W YTA12P40341 825 aa1.88□□□□□ -2.11
RTP1YMR185W DIM1P41819 318 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W SAE2P46946 345 aa1.88□□□□□ -2.11
RTP1YMR185W FMP33P46998 180 aa1.88□□□□□ -2.11
RTP1YMR185W SHE10P53075 577 aa1.88□□□□□ -2.11
RTP1YMR185W PUS2P53167 370 aa1.88□□□□□ -2.11
RTP1YMR185W RCF2P53721 224 aa1.88□□□□□ -2.11
RTP1YMR185W YNL144CP53907 740 aa1.88□□□□□ -2.11
RTP1YMR185W GIR2Q03768 265 aaPredicted RBP1.88□□□□□ -2.11
RTP1YMR185W YKU80Q04437 629 aa1.88□□□□□ -2.11
RTP1YMR185W YDL057WQ07379 328 aa1.88□□□□□ -2.11
RTP1YMR185W BDF2Q07442 638 aa1.88□□□□□ -2.11
RTP1YMR185W PSR1Q07800 427 aa1.88□□□□□ -2.11
RTP1YMR185W VHS3Q08438 674 aa1.88□□□□□ -2.11
RTP1YMR185W CDC53Q12018 815 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W JIP3O13555 125 aa1.88□□□□□ -2.11
RTP1YMR185W PGK1P00560 416 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W SPS1P08458 490 aa1.88□□□□□ -2.11
RTP1YMR185W TUB3P09734 445 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W PFK1P16861 987 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W PRP22P24384 1145 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W PUF4P25339 888 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
RTP1YMR185W KAR4P25583 335 aa1.88□□□□□ -2.11
RTP1YMR185W CDC3P32457 520 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W GCD6P32501 712 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W CBF2P32504 956 aa1.88□□□□□ -2.11
RTP1YMR185W MDL2P33311 773 aa1.88□□□□□ -2.11
RTP1YMR185W SLA2P33338 968 aa1.88□□□□□ -2.11
RTP1YMR185W AST1P35183 429 aa1.88□□□□□ -2.11
RTP1YMR185W YKL050CP35736 922 aa1.88□□□□□ -2.11
RTP1YMR185W YKR015CP36111 568 aa1.88□□□□□ -2.11
RTP1YMR185W POP4P38336 279 aa1.88□□□□□ -2.11
RTP1YMR185W MSG5P38590 489 aa1.88□□□□□ -2.11
RTP1YMR185W HIS2P38635 335 aa1.88□□□□□ -2.11
RTP1YMR185W VPS45P38932 577 aa1.88□□□□□ -2.11
RTP1YMR185W LCB2P40970 561 aa1.88□□□□□ -2.11
RTP1YMR185W YJL045WP47052 634 aa1.88□□□□□ -2.11
RTP1YMR185W LIA1P47120 325 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W HUL5P53119 910 aa1.88□□□□□ -2.11
RTP1YMR185W YGR111WP53265 400 aa1.88□□□□□ -2.11
RTP1YMR185W RPT4P53549 437 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W ARO80Q04052 950 aa1.88□□□□□ -2.11
RTP1YMR185W YMR027WQ04371 470 aa1.88□□□□□ -2.11
RTP1YMR185W UTP14Q04500 899 aaKnown RBP1.88□□□□□ -2.11
RTP1YMR185W CIR2Q08822 631 aa1.88□□□□□ -2.11
RTP1YMR185W VIK1Q12045 647 aa1.88□□□□□ -2.11
RTP1YMR185W RKM4Q12504 494 aa1.88□□□□□ -2.11
RTP1YMR185W THS1P04801 734 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W TCP1P12612 559 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W RPL8AP17076 256 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W CBF1P17106 351 aa1.87□□□□□ -2.11
RTP1YMR185W TPS2P31688 896 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W DBF4P32325 704 aa1.87□□□□□ -2.11
RTP1YMR185W RPC82P32349 654 aa1.87□□□□□ -2.11
RTP1YMR185W UGA4P32837 571 aa1.87□□□□□ -2.11
RTP1YMR185W TSA1P34760 196 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W HES1P35843 434 aa1.87□□□□□ -2.11
RTP1YMR185W TSC10P38342 320 aa1.87□□□□□ -2.11
RTP1YMR185W MSR1P38714 643 aa1.87□□□□□ -2.11
RTP1YMR185W YMR134WP40207 237 aa1.87□□□□□ -2.11
RTP1YMR185W ASG1P40467 964 aa1.87□□□□□ -2.11
RTP1YMR185W YJL107CP42947 387 aa1.87□□□□□ -2.11
RTP1YMR185W PHO86P46956 311 aa1.87□□□□□ -2.11
RTP1YMR185W SET2P46995 733 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W PAN2P53010 1115 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W LSB1P53281 241 aa1.87□□□□□ -2.11
RTP1YMR185W CNM67P53865 581 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W KTR5P53966 522 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W DOS2P54858 310 aa1.87□□□□□ -2.11
RTP1YMR185W OSH6Q02201 448 aa1.87□□□□□ -2.11
RTP1YMR185W PPM1Q04081 328 aa1.87□□□□□ -2.11
RTP1YMR185W SXM1Q04175 944 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W YDR222WQ04925 415 aa1.87□□□□□ -2.11
RTP1YMR185W SMD2Q06217 110 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W NDL1Q06568 189 aa1.87□□□□□ -2.11
RTP1YMR185W RIX7Q07844 837 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W KEL3Q08979 651 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W MDM20Q12387 796 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W RRP36Q12481 300 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W TUB2P02557 457 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W SWI6P09959 803 aa1.87□□□□□ -2.11
RTP1YMR185W SSA1P10591 642 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W DBP5P20449 482 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W EFB1P32471 206 aaKnown RBP1.87□□□□□ -2.11
RTP1YMR185W ABD1P32783 436 aaPredicted RBP1.87□□□□□ -2.11
RTP1YMR185W YSC83P32792 385 aa1.87□□□□□ -2.11
RTP1YMR185W CCL1P37366 393 aa1.87□□□□□ -2.11
RTP1YMR185W PFF1P38244 976 aa1.87□□□□□ -2.11
RTP1YMR185W PCA1P38360 1216 aa1.87□□□□□ -2.11
RTP1YMR185W ERP5P38819 212 aa1.87□□□□□ -2.11
RTP1YMR185W TDA11P38854 504 aa1.87□□□□□ -2.11
RTP1YMR185W AIM21P40563 679 aa1.87□□□□□ -2.11
RTP1YMR185W UBP6P43593 499 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms