RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C ROG3P43602 733 aa1.88□□□□□ -2.11
IRC20YLR247C RPT6Q01939 405 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C SSQ1Q05931 657 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C VPS36Q06696 566 aa1.88□□□□□ -2.11
IRC20YLR247C SHS1Q07657 551 aa1.88□□□□□ -2.11
IRC20YLR247C ATP16Q12165 160 aa1.88□□□□□ -2.11
IRC20YLR247C YLL058WQ12198 575 aa1.88□□□□□ -2.11
IRC20YLR247C YRM1Q12340 786 aa1.88□□□□□ -2.11
IRC20YLR247C RRI2Q12348 645 aa1.88□□□□□ -2.11
IRC20YLR247C TRS33Q99394 268 aa1.88□□□□□ -2.11
IRC20YLR247C ERG11P10614 530 aa1.88□□□□□ -2.11
IRC20YLR247C MAK31P23059 88 aa1.88□□□□□ -2.11
IRC20YLR247C NAB2P32505 525 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
IRC20YLR247C RRN6P32786 894 aa1.88□□□□□ -2.11
IRC20YLR247C ECM21P38167 1117 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C RGD1P38339 666 aa1.88□□□□□ -2.11
IRC20YLR247C PTC7P38797 343 aa1.88□□□□□ -2.11
IRC20YLR247C LRP1P38801 184 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C NDE1P40215 560 aa1.88□□□□□ -2.11
IRC20YLR247C AAD14P42884 376 aa1.88□□□□□ -2.11
IRC20YLR247C YFL034WP43564 1073 aa1.88□□□□□ -2.11
IRC20YLR247C HXT16P47185 567 aa1.88□□□□□ -2.11
IRC20YLR247C IST1P53843 298 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C YDL057WQ07379 328 aa1.88□□□□□ -2.11
IRC20YLR247C MED4Q12343 284 aa1.88□□□□□ -2.11
IRC20YLR247C NKP1Q12493 238 aa1.88□□□□□ -2.11
IRC20YLR247C RNR2P09938 399 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C ABF1P14164 731 aa1.88□□□□□ -2.11
IRC20YLR247C DAL7P21826 554 aa1.88□□□□□ -2.11
IRC20YLR247C BUD14P27637 709 aa1.88□□□□□ -2.11
IRC20YLR247C GPI10P30777 616 aa1.88□□□□□ -2.11
IRC20YLR247C ARO7P32178 256 aa1.88□□□□□ -2.11
IRC20YLR247C LYP1P32487 611 aa1.88□□□□□ -2.11
IRC20YLR247C NIC96P34077 839 aa1.88□□□□□ -2.11
IRC20YLR247C COY1P34237 679 aa1.88□□□□□ -2.11
IRC20YLR247C LAS1P36146 502 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C GLY1P37303 387 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C ERC1P38767 581 aa1.88□□□□□ -2.11
IRC20YLR247C VPS8P39702 1274 aa1.88□□□□□ -2.11
IRC20YLR247C AIM9P40053 627 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C DOT6P40059 670 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C TOK1P40310 691 aa1.88□□□□□ -2.11
IRC20YLR247C CSM2P40465 213 aa1.88□□□□□ -2.11
IRC20YLR247C YIL092WP40497 633 aa1.88□□□□□ -2.11
IRC20YLR247C MAM33P40513 266 aa1.88□□□□□ -2.11
IRC20YLR247C YIR016WP40572 265 aa1.88□□□□□ -2.11
IRC20YLR247C IDS2P46958 469 aa1.88□□□□□ -2.11
IRC20YLR247C APT1P49435 187 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C CTF18P49956 741 aa1.88□□□□□ -2.11
IRC20YLR247C MRK1P50873 501 aa1.88□□□□□ -2.11
IRC20YLR247C MNP1P53163 194 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C YGR054WP53235 642 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C MFM1Q02783 413 aa1.88□□□□□ -2.11
IRC20YLR247C MMT1Q03218 510 aa1.88□□□□□ -2.11
IRC20YLR247C PRP3Q03338 469 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C HAS1Q03532 505 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C TRS120Q04183 1289 aa1.88□□□□□ -2.11
IRC20YLR247C KRE28Q04431 385 aa1.88□□□□□ -2.11
IRC20YLR247C YMR111CQ04461 462 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C SUE1Q06524 206 aa1.88□□□□□ -2.11
IRC20YLR247C ZEO1Q08245 113 aa1.88□□□□□ -2.11
IRC20YLR247C CLP1Q08685 445 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C YIL002W-AQ3E7Z5 69 aa1.88□□□□□ -2.11
IRC20YLR247C GRR1P24814 1151 aa1.88□□□□□ -2.11
IRC20YLR247C VAC17P25591 423 aa1.88□□□□□ -2.11
IRC20YLR247C MSP1P28737 362 aa1.88□□□□□ -2.11
IRC20YLR247C SIN4P32259 974 aa1.88□□□□□ -2.11
IRC20YLR247C NDI1P32340 513 aa1.88□□□□□ -2.11
IRC20YLR247C VMA8P32610 256 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C MIP6P38760 659 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C MDE1P47095 244 aa1.88□□□□□ -2.11
IRC20YLR247C LSB1P53281 241 aa1.88□□□□□ -2.11
IRC20YLR247C RPL34AP87262 121 aaPredicted RBP1.88□□□□□ -2.11
IRC20YLR247C AIM6Q07716 390 aa1.88□□□□□ -2.11
IRC20YLR247C RRP40Q08285 240 aaKnown RBP1.88□□□□□ -2.11
IRC20YLR247C SRO7Q12038 1033 aa1.88□□□□□ -2.11
IRC20YLR247C YDR061WQ12298 539 aa1.88□□□□□ -2.11
IRC20YLR247C YDR461C-AQ2V2P7 80 aa1.88□□□□□ -2.11
IRC20YLR247C SUP45P12385 437 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C MSS116P15424 664 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C SCL1P21243 252 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C GCS1P35197 352 aa1.87□□□□□ -2.11
IRC20YLR247C YKR051WP36142 418 aa1.87□□□□□ -2.11
IRC20YLR247C RFC5P38251 354 aa1.87□□□□□ -2.11
IRC20YLR247C ATX1P38636 73 aa1.87□□□□□ -2.11
IRC20YLR247C YNG2P38806 282 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C VPS41P38959 992 aa1.87□□□□□ -2.11
IRC20YLR247C YIL001WP40560 513 aa1.87□□□□□ -2.11
IRC20YLR247C CUE3P53137 624 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C YGR012WP53206 393 aa1.87□□□□□ -2.11
IRC20YLR247C NQM1P53228 333 aaPredicted RBP1.87□□□□□ -2.11
IRC20YLR247C PPN1Q04119 674 aa1.87□□□□□ -2.11
IRC20YLR247C GSF2Q04697 403 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C RTT103Q05543 409 aa1.87□□□□□ -2.11
IRC20YLR247C MED7Q08278 222 aa1.87□□□□□ -2.11
IRC20YLR247C DNL4Q08387 944 aaPredicted RBP1.87□□□□□ -2.11
IRC20YLR247C SGT2Q12118 346 aaKnown RBP1.87□□□□□ -2.11
IRC20YLR247C SSF2Q12153 453 aaPredicted RBP1.87□□□□□ -2.11
IRC20YLR247C ARP6Q12509 438 aa1.87□□□□□ -2.11
IRC20YLR247C ADE3P07245 946 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms