RNA–Protein interactions for RNA: YHR159W

TDA11, Transcript of Putative protein of unknown function, yeast

Gene TDA11, Length 1,515 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA11	YHR159W	YJR039W	P47107	1121 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	TRF5	P48561	642 aa	Known RBP	4.8	□□□□□ -1.64
TDA11	YHR159W	LYS4	P49367	693 aa	Predicted RBP	4.8	□□□□□ -1.64
TDA11	YHR159W	VPS4	P52917	437 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	DSD1	P53095	428 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	MDR1	P53258	950 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	SNF12	P53628	566 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	GIS4	Q04233	774 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	MRD1	Q06106	887 aa	Known RBP	4.8	□□□□□ -1.64
TDA11	YHR159W	PML1	Q07930	204 aa	Predicted RBP	4.8	□□□□□ -1.64
TDA11	YHR159W	RRT8	Q08219	342 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	HFI1	Q12060	488 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	SLP1	Q12232	587 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	ZRT2	Q12436	422 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	AVL9	Q12500	764 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	YOR019W	Q99248	730 aa		4.8	□□□□□ -1.64
TDA11	YHR159W	CLN1	P20437	546 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	DBP3	P20447	523 aa	Known RBP	4.79	□□□□□ -1.64
TDA11	YHR159W	SEC65	P29478	273 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	AFR1	P33304	620 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	MAE1	P36013	669 aa	Known RBP	4.79	□□□□□ -1.64
TDA11	YHR159W	UGA2	P38067	497 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	PCH2	P38126	564 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	FAT1	P38225	669 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	COS111	P38308	924 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	UTP9	P38882	575 aa	Known RBP	4.79	□□□□□ -1.64
TDA11	YHR159W	CEM1	P39525	442 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	EAF5	P39995	279 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	SCS2	P40075	244 aa	Known RBP	4.79	□□□□□ -1.64
TDA11	YHR159W	THI6	P41835	540 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	YFL052W	P43551	465 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	TCB2	P48231	1178 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	ALT1	P52893	592 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	DUO1	P53168	247 aa	Known RBP	4.79	□□□□□ -1.64
TDA11	YHR159W	RBA50	Q04418	439 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	HRQ1	Q05549	1077 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	SKG3	Q06315	1026 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	YPR196W	Q06595	470 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	ENV7	Q12003	364 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	TGL5	Q12043	749 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
TDA11	YHR159W	YDR461C-A	Q2V2P7	80 aa		4.79	□□□□□ -1.64
TDA11	YHR159W	YML002W	P0CF17	737 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	APE1	P14904	514 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	EST1	P17214	699 aa	Predicted RBP	4.78	□□□□□ -1.64
TDA11	YHR159W	ERS1	P17261	260 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	VPS3	P23643	1011 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	CLB1	P24868	471 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	CCR4	P31384	837 aa	Known RBP	4.78	□□□□□ -1.64
TDA11	YHR159W	SLA2	P33338	968 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	TGL1	P34163	548 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	NNK1	P36003	928 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	PXL1	P36166	706 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	PEX32	P38292	413 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	SLX1	P38324	304 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	RPN3	P40016	523 aa	Known RBP	4.78	□□□□□ -1.64
TDA11	YHR159W	FET5	P43561	622 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	ALY2	P47029	1046 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	LYS5	P50113	272 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	EFM5	P53200	248 aa	Known RBP	4.78	□□□□□ -1.64
TDA11	YHR159W	DOT1	Q04089	582 aa	Known RBP	4.78	□□□□□ -1.64
TDA11	YHR159W	TSR1	Q07381	788 aa	Known RBP	4.78	□□□□□ -1.64
TDA11	YHR159W	YOR352W	Q08816	343 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	TY3A-G	Q12173	290 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	TY1A-BL	Q12266	440 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	GPM3	Q12326	303 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	ADF1	Q2V2Q1	113 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	TY3A-I	Q99219	290 aa		4.78	□□□□□ -1.64
TDA11	YHR159W	PHO5	P00635	467 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	VAS1	P07806	1104 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	CAR2	P07991	424 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	SUI3	P09064	285 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	CDC42	P19073	191 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	HMX1	P32339	317 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	OAF3	P36023	863 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	YKR078W	P36158	585 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	MRPL36	P36531	177 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	MUP3	P38734	546 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	SLN1	P39928	1220 aa	Predicted RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	YER158C	P40095	573 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	UTP18	P40362	594 aa	Predicted RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	LIA1	P47120	325 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	CTF18	P49956	741 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	PAN2	P53010	1115 aa	Predicted RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	LCL3	P53153	274 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	VPS75	P53853	264 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	ARP5	P53946	755 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	PRO2	P54885	456 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	KAP95	Q06142	861 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	YOR223W	Q12015	292 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	VPS54	Q12071	889 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	SPE3	Q12074	293 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	YOL159C-A	Q3E769	90 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	TCB3	Q03640	1545 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	ADH4	P10127	382 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	STE12	P13574	688 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	BET2	P20133	325 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	RFA1	P22336	621 aa	Known RBP	4.77	□□□□□ -1.65
TDA11	YHR159W	SPS22	P25380	463 aa		4.77	□□□□□ -1.65
TDA11	YHR159W	MSP1	P28737	362 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms