RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C HSP32Q08992 237 aa1.48□□□□□ -2.17
SWI4YER111C HUA2Q12134 243 aa1.48□□□□□ -2.17
SWI4YER111C ERP4Q12450 207 aa1.48□□□□□ -2.17
SWI4YER111C PCD1Q12524 340 aa1.48□□□□□ -2.17
SWI4YER111C ULS1Q08562 1619 aa1.48□□□□□ -2.17
SWI4YER111C IML1P47170 1584 aa1.48□□□□□ -2.17
SWI4YER111C XRN1P22147 1528 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C SNF1P06782 633 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C AAC3P18238 307 aa1.48□□□□□ -2.17
SWI4YER111C FUR1P18562 216 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C PRE8P23639 250 aa1.48□□□□□ -2.17
SWI4YER111C PEP3P27801 918 aa1.48□□□□□ -2.17
SWI4YER111C TOD6P34219 525 aa1.48□□□□□ -2.17
SWI4YER111C CTF13P35203 478 aa1.48□□□□□ -2.17
SWI4YER111C CRG1P38892 291 aaRIP-Chip data1.48□□□□□ -2.17 RIP-Chip
SWI4YER111C LYS9P38999 446 aa1.48□□□□□ -2.17
SWI4YER111C YJL193WP39542 402 aa1.48□□□□□ -2.17
SWI4YER111C GET2P40056 285 aa1.48□□□□□ -2.17
SWI4YER111C DPH1P40487 425 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C GSM1P42950 618 aa1.48□□□□□ -2.17
SWI4YER111C CCT8P47079 568 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C RFX1P48743 811 aa1.48□□□□□ -2.17
SWI4YER111C ESF2P53743 316 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C MFM1Q02783 413 aa1.48□□□□□ -2.17
SWI4YER111C GIR2Q03768 265 aaPredicted RBP1.48□□□□□ -2.17
SWI4YER111C CIA1Q05583 330 aa1.48□□□□□ -2.17
SWI4YER111C DUS4Q06063 367 aa1.48□□□□□ -2.17
SWI4YER111C CRD1Q07560 283 aa1.48□□□□□ -2.17
SWI4YER111C CHS5Q12114 671 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C VPS15P22219 1454 aa1.48□□□□□ -2.17
SWI4YER111C TUF1P02992 437 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C PGS1P25578 521 aa1.48□□□□□ -2.17
SWI4YER111C TFC3P34111 1160 aa1.48□□□□□ -2.17
SWI4YER111C CBR1P38626 284 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C RIC1P40395 1056 aa1.48□□□□□ -2.17
SWI4YER111C TRM8Q12009 286 aa1.48□□□□□ -2.17
SWI4YER111C TAH18Q12181 623 aa1.48□□□□□ -2.17
SWI4YER111C RRI2Q12348 645 aa1.48□□□□□ -2.17
SWI4YER111C GPR1Q12361 961 aa1.48□□□□□ -2.17
SWI4YER111C ERG27Q12452 347 aaKnown RBP1.48□□□□□ -2.17
SWI4YER111C HSH49Q99181 213 aaPredicted RBP1.48□□□□□ -2.17
SWI4YER111C FOB1O13329 566 aa1.47□□□□□ -2.17
SWI4YER111C LAT1P12695 482 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C PRP45P28004 379 aaPredicted RBP1.47□□□□□ -2.17
SWI4YER111C DSS4P32601 143 aa1.47□□□□□ -2.17
SWI4YER111C CDS1P38221 457 aa1.47□□□□□ -2.17
SWI4YER111C YLF2P38746 405 aa1.47□□□□□ -2.17
SWI4YER111C FSH1P38777 243 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C NUP60P39705 539 aa1.47□□□□□ -2.17
SWI4YER111C ECM1P39715 212 aa1.47□□□□□ -2.17
SWI4YER111C YEL025CP39991 1188 aa1.47□□□□□ -2.17
SWI4YER111C VTC2P43585 828 aa1.47□□□□□ -2.17
SWI4YER111C AMA1P50082 593 aa1.47□□□□□ -2.17
SWI4YER111C COG1P53079 417 aa1.47□□□□□ -2.17
SWI4YER111C PEF1P53238 335 aa1.47□□□□□ -2.17
SWI4YER111C MRPL19P53875 158 aa1.47□□□□□ -2.17
SWI4YER111C SLU7Q02775 382 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C ARP9Q05123 467 aa1.47□□□□□ -2.17
SWI4YER111C AIM39Q08223 395 aa1.47□□□□□ -2.17
SWI4YER111C IRC13Q08630 104 aa1.47□□□□□ -2.17
SWI4YER111C TY1B-DR3Q99231 1755 aa1.47□□□□□ -2.17
SWI4YER111C TY1B-JR2P47100 1755 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C TY1B-ER2Q03619 1755 aa1.47□□□□□ -2.17
SWI4YER111C TY1B-MR1Q04214 1755 aa1.47□□□□□ -2.17
SWI4YER111C TY1B-MR2Q04670 1755 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C TY1B-LR1Q12088 1755 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C TY1B-NL1Q12112 1755 aa1.47□□□□□ -2.17
SWI4YER111C TY1B-GR1Q12141 1755 aa1.47□□□□□ -2.17
SWI4YER111C TY1B-BLQ12490 1755 aa1.47□□□□□ -2.17
SWI4YER111C ATP2P00830 511 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C PET122P10355 254 aa1.47□□□□□ -2.17
SWI4YER111C MTF2P10849 440 aa1.47□□□□□ -2.17
SWI4YER111C MRP7P12687 371 aa1.47□□□□□ -2.17
SWI4YER111C PRE2P30656 287 aaKnown RBP1.47□□□□□ -2.17
SWI4YER111C FMO1P38866 432 aa1.47□□□□□ -2.17
SWI4YER111C VPS8P39702 1274 aa1.47□□□□□ -2.17
SWI4YER111C AFG3P39925 761 aa1.47□□□□□ -2.17
SWI4YER111C GID8P40208 455 aa1.47□□□□□ -2.17
SWI4YER111C YJR061WP40355 935 aa1.47□□□□□ -2.17
SWI4YER111C MPS3P47069 682 aa1.47□□□□□ -2.17
SWI4YER111C ECL1P48235 211 aa1.47□□□□□ -2.17
SWI4YER111C TEL2P53038 688 aa1.47□□□□□ -2.17
SWI4YER111C ORC3P54790 616 aa1.47□□□□□ -2.17
SWI4YER111C STP3Q05937 343 aa1.47□□□□□ -2.17
SWI4YER111C THI22Q06490 572 aa1.47□□□□□ -2.17
SWI4YER111C YDL086WQ07505 273 aa1.47□□□□□ -2.17
SWI4YER111C NBP2Q12163 236 aa1.47□□□□□ -2.17
SWI4YER111C RRG1Q12167 365 aaPredicted RBP1.47□□□□□ -2.17
SWI4YER111C YOR111WQ99210 232 aa1.47□□□□□ -2.17
SWI4YER111C CDC31P06704 161 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C FUM1P08417 488 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C CDC16P09798 840 aa1.46□□□□□ -2.18
SWI4YER111C ABF1P14164 731 aa1.46□□□□□ -2.18
SWI4YER111C FUB1P25659 250 aa1.46□□□□□ -2.18
SWI4YER111C CMK1P27466 446 aaKnown RBP1.46□□□□□ -2.18
SWI4YER111C NTH1P32356 751 aa1.46□□□□□ -2.18
SWI4YER111C ELF1P36053 145 aa1.46□□□□□ -2.18
SWI4YER111C YBL029WP38201 376 aa1.46□□□□□ -2.18
SWI4YER111C MTG2P38860 518 aa1.46□□□□□ -2.18
SWI4YER111C YER010CP40011 234 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms