RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W CTT1P06115 562 aa2.38□□□□□ -2.03
SNC1YAL030W TPK1P06244 397 aa2.38□□□□□ -2.03
SNC1YAL030W FUM1P08417 488 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W CDC16P09798 840 aa2.38□□□□□ -2.03
SNC1YAL030W PET122P10355 254 aa2.38□□□□□ -2.03
SNC1YAL030W PFK2P16862 959 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SNC1YAL030W SAN1P22470 610 aa2.38□□□□□ -2.03
SNC1YAL030W YCR061WP25639 631 aa2.38□□□□□ -2.03
SNC1YAL030W RPS7AP26786 190 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W CAP1P28495 268 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W SWC3P31376 625 aa2.38□□□□□ -2.03
SNC1YAL030W SAC6P32599 642 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W ELM1P32801 640 aa2.38□□□□□ -2.03
SNC1YAL030W CNS1P33313 385 aa2.38□□□□□ -2.03
SNC1YAL030W TOD6P34219 525 aa2.38□□□□□ -2.03
SNC1YAL030W SET3P36124 751 aa2.38□□□□□ -2.03
SNC1YAL030W MRPL7P36519 292 aa2.38□□□□□ -2.03
SNC1YAL030W NOP4P37838 685 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W EHT1P38295 451 aa2.38□□□□□ -2.03
SNC1YAL030W YJL206CP39529 758 aa2.38□□□□□ -2.03
SNC1YAL030W VPS8P39702 1274 aa2.38□□□□□ -2.03
SNC1YAL030W TMN3P40071 706 aa2.38□□□□□ -2.03
SNC1YAL030W NDE1P40215 560 aa2.38□□□□□ -2.03
SNC1YAL030W YJL163CP46996 555 aa2.38□□□□□ -2.03
SNC1YAL030W MPS3P47069 682 aa2.38□□□□□ -2.03
SNC1YAL030W PAN2P53010 1115 aaPredicted RBP2.38□□□□□ -2.03
SNC1YAL030W MCM6P53091 1017 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W YGR054WP53235 642 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W FHN1P53279 174 aa2.38□□□□□ -2.03
SNC1YAL030W CSL4P53859 292 aaPredicted RBP2.38□□□□□ -2.03
SNC1YAL030W CBK1P53894 756 aa2.38□□□□□ -2.03
SNC1YAL030W RCO1Q04779 684 aa2.38□□□□□ -2.03
SNC1YAL030W YSH1Q06224 779 aaPredicted RBP2.38□□□□□ -2.03
SNC1YAL030W URN1Q06525 465 aaKnown RBP2.38□□□□□ -2.03
SNC1YAL030W TRM8Q12009 286 aa2.38□□□□□ -2.03
SNC1YAL030W NBP2Q12163 236 aa2.38□□□□□ -2.03
SNC1YAL030W ABF1P14164 731 aa2.37□□□□□ -2.03
SNC1YAL030W ERG4P25340 473 aa2.37□□□□□ -2.03
SNC1YAL030W EFT1P32324 842 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W PHO11P35842 467 aa2.37□□□□□ -2.03
SNC1YAL030W MUD2P36084 527 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W PHO12P38693 467 aa2.37□□□□□ -2.03
SNC1YAL030W HRB1P38922 454 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SNC1YAL030W KHA1P40309 873 aa2.37□□□□□ -2.03
SNC1YAL030W IRC6P43615 237 aa2.37□□□□□ -2.03
SNC1YAL030W ARC1P46672 376 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W IDS2P46958 469 aa2.37□□□□□ -2.03
SNC1YAL030W AVT1P47082 602 aa2.37□□□□□ -2.03
SNC1YAL030W VPS4P52917 437 aa2.37□□□□□ -2.03
SNC1YAL030W COS12P53053 380 aa2.37□□□□□ -2.03
SNC1YAL030W BSC5P53755 489 aa2.37□□□□□ -2.03
SNC1YAL030W TIM50Q02776 476 aa2.37□□□□□ -2.03
SNC1YAL030W SNO4Q04902 237 aa2.37□□□□□ -2.03
SNC1YAL030W RGC1Q06108 1083 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W IRC13Q08630 104 aa2.37□□□□□ -2.03
SNC1YAL030W FRE5Q08908 694 aa2.37□□□□□ -2.03
SNC1YAL030W HSP33Q08914 237 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W BMS1Q08965 1183 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W HSP32Q08992 237 aa2.37□□□□□ -2.03
SNC1YAL030W SUL2Q12325 893 aa2.37□□□□□ -2.03
SNC1YAL030W SCM3Q12334 223 aa2.37□□□□□ -2.03
SNC1YAL030W ZRT2Q12436 422 aa2.37□□□□□ -2.03
SNC1YAL030W RVB2Q12464 471 aaKnown RBP2.37□□□□□ -2.03
SNC1YAL030W YBR255C-AQ3E776 120 aa2.37□□□□□ -2.03
SNC1YAL030W YKL033W-AQ86ZR7 236 aa2.37□□□□□ -2.03
SNC1YAL030W PPR1P07272 904 aaPredicted RBP2.36□□□□□ -2.03
SNC1YAL030W RPB2P08518 1224 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W TY2A-LR1P0C2J4 438 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-FP0CX61 438 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-GR2P0CX62 438 aa2.36□□□□□ -2.03
SNC1YAL030W RPL19AP0CX82 189 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W RPL19BP0CX83 189 aaPredicted RBP2.36□□□□□ -2.03
SNC1YAL030W SPO16P17122 198 aa2.36□□□□□ -2.03
SNC1YAL030W THR1P17423 357 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W AAC3P18238 307 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-CP25383 438 aa2.36□□□□□ -2.03
SNC1YAL030W CMK1P27466 446 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W HRR25P29295 494 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W PRE2P30656 287 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W NFU1P32860 256 aa2.36□□□□□ -2.03
SNC1YAL030W THI80P35202 319 aa2.36□□□□□ -2.03
SNC1YAL030W NUP120P35729 1037 aa2.36□□□□□ -2.03
SNC1YAL030W DEF1P35732 738 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W SDH8P38345 138 aa2.36□□□□□ -2.03
SNC1YAL030W UTP9P38882 575 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W YEL068CP39977 110 aa2.36□□□□□ -2.03
SNC1YAL030W YJR061WP40355 935 aa2.36□□□□□ -2.03
SNC1YAL030W IST3P40565 148 aaPredicted RBP2.36□□□□□ -2.03
SNC1YAL030W SIP4P46954 829 aa2.36□□□□□ -2.03
SNC1YAL030W ZAP1P47043 880 aa2.36□□□□□ -2.03
SNC1YAL030W SGM1P47166 707 aa2.36□□□□□ -2.03
SNC1YAL030W ASE1P50275 885 aa2.36□□□□□ -2.03
SNC1YAL030W RIA1P53893 1110 aa2.36□□□□□ -2.03
SNC1YAL030W RNT1Q02555 471 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-DR2Q03483 438 aa2.36□□□□□ -2.03
SNC1YAL030W EFR3Q03653 782 aaKnown RBP2.36□□□□□ -2.03
SNC1YAL030W USA1Q03714 838 aa2.36□□□□□ -2.03
SNC1YAL030W GTB1Q04924 702 aa2.36□□□□□ -2.03
SNC1YAL030W HOF1Q05080 669 aa2.36□□□□□ -2.03
SNC1YAL030W ATG23Q06671 453 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms