RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 TRPC5Q9UL62 973 aaPredicted RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 CDC27P30260 824 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 NTRK3Q16288 839 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
CLPX-204ENST00000559152 QTRT2Q9H974 415 aaKnown RBP13.11□□□□□ -0.31
CLPX-204ENST00000559152 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 SPTLC2O15270 562 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 POLR3DP05423 398 aaPredicted RBP13.1□□□□□ -0.31
CLPX-204ENST00000559152 RTN1Q16799 776 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 LEMD3Q9Y2U8 911 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 A0A1B0GUL6 1792 aa13.1□□□□□ -0.31
CLPX-204ENST00000559152 COL4A1P02462 1669 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 SLC3A2P08195 630 aaKnown RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 TM4SF1P30408 202 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 SAFBQ15424 915 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLPX-204ENST00000559152 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 KRT40Q6A162 431 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 FTOQ9C0B1 505 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLPX-204ENST00000559152 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 LY75O60449 1722 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 COL1A1P02452 1464 aaPredicted RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 SNW1Q13573 536 aaKnown RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 GRAPQ13588 217 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 GRAPLQ8TC17 118 aaPredicted RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 CRNKL1Q9BZJ0 848 aaKnown RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 SENP2Q9HC62 589 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
CLPX-204ENST00000559152 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
CLPX-204ENST00000559152 FGRP09769 529 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 RXRAP19793 462 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 U2AF2P26368 475 aaKnown RBP eCLIP13.08□□□□□ -0.326e-7■■■■□ 24.5
CLPX-204ENST00000559152 STX1AQ16623 288 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 PHKBQ93100 1093 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 PPP6R2O75170 966 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 DEXIO95424 95 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 CALM1P0DP23 149 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 CALM2P0DP24 149 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 CALM3P0DP25 149 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 ZNF165P49910 485 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 MECOMQ03112 1051 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 FANCBQ8NB91 859 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 WDR66Q8TBY9 1149 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
CLPX-204ENST00000559152 CMA1P23946 247 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 NFIXQ14938 502 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 ZNF654Q8IZM8 581 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 CBX8Q9HC52 389 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 CACNA1SQ13698 1873 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 XBP1P17861 261 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 MYL10Q9BUA6 226 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 RBM28Q9NW13 759 aaKnown RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
CLPX-204ENST00000559152 ARPP21Q9UBL0 812 aaPredicted RBP13.07□□□□□ -0.32
CLPX-204ENST00000559152 TNKSO95271 1327 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 XDHP47989 1333 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 CHD4Q14839 1912 aa13.06□□□□□ -0.32
CLPX-204ENST00000559152 DYNLL1P63167 89 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms