RNA–Protein interactions for RNA: YPL248C

GAL4, Transcript of DNA-binding transcription factor required for activating GAL genes, yeast

Gene GAL4, Length 2,646 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAL4	YPL248C	CKB1	P43639	278 aa		5.92	□□□□□ -1.46
GAL4	YPL248C	GRX3	Q03835	250 aa		5.92	□□□□□ -1.46
GAL4	YPL248C	QCR6	P00127	147 aa		5.91	□□□□□ -1.46
GAL4	YPL248C	SPT2	P06843	333 aa	Predicted RBP	5.91	□□□□□ -1.46
GAL4	YPL248C	PAM1	P37304	830 aa	Known RBP	5.91	□□□□□ -1.46
GAL4	YPL248C	SLX8	P40072	274 aa		5.91	□□□□□ -1.46
GAL4	YPL248C	MRX12	P47084	519 aa		5.91	□□□□□ -1.46
GAL4	YPL248C	BRE1	Q07457	700 aa	Known RBP	5.91	□□□□□ -1.46
GAL4	YPL248C	YTA7	P40340	1379 aa		5.91	□□□□□ -1.46
GAL4	YPL248C	RSE1	Q04693	1361 aa	Known RBP	5.9	□□□□□ -1.47
GAL4	YPL248C	AIM21	P40563	679 aa		5.89	□□□□□ -1.47
GAL4	YPL248C	CHD1	P32657	1468 aa		5.89	□□□□□ -1.47
GAL4	YPL248C	NOP7	P53261	605 aa	Known RBP	5.87	□□□□□ -1.47
GAL4	YPL248C	ESP1	Q03018	1630 aa		5.86	□□□□□ -1.47
GAL4	YPL248C	RAD2	P07276	1031 aa		5.85	□□□□□ -1.47
GAL4	YPL248C	GAL11	P19659	1081 aa		5.85	□□□□□ -1.47
GAL4	YPL248C	MYO2	P19524	1574 aa	Known RBP	5.85	□□□□□ -1.47
GAL4	YPL248C	RPA135	P22138	1203 aa	Known RBP	5.85	□□□□□ -1.47
GAL4	YPL248C	TY4A-J	P47023	414 aa		5.85	□□□□□ -1.47
GAL4	YPL248C	OCA5	P38738	679 aa		5.84	□□□□□ -1.47
GAL4	YPL248C	UBX5	Q06682	500 aa		5.84	□□□□□ -1.47
GAL4	YPL248C	SPT7	P35177	1332 aa		5.84	□□□□□ -1.47
GAL4	YPL248C	MAM3	Q12296	706 aa		5.83	□□□□□ -1.48
GAL4	YPL248C	MMS22	Q06164	1454 aa		5.83	□□□□□ -1.48
GAL4	YPL248C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
GAL4	YPL248C	PMC1	P38929	1173 aa	Predicted RBP	5.82	□□□□□ -1.48
GAL4	YPL248C	YMR196W	Q04336	1088 aa		5.82	□□□□□ -1.48
GAL4	YPL248C	RPT2	P40327	437 aa	Known RBP	5.82	□□□□□ -1.48
GAL4	YPL248C	PSK2	Q08217	1101 aa		5.81	□□□□□ -1.48
GAL4	YPL248C	SEC20	P28791	383 aa		5.81	□□□□□ -1.48
GAL4	YPL248C	MPE1	P35728	441 aa	Known RBP	5.81	□□□□□ -1.48
GAL4	YPL248C	GIR2	Q03768	265 aa	Predicted RBP	5.81	□□□□□ -1.48
GAL4	YPL248C	TAF2	P23255	1407 aa		5.81	□□□□□ -1.48
GAL4	YPL248C	FPR3	P38911	411 aa	Known RBP	5.8	□□□□□ -1.48
GAL4	YPL248C	MCM1	P11746	286 aa		5.8	□□□□□ -1.48
GAL4	YPL248C	HSP82	P02829	709 aa	Known RBP	5.79	□□□□□ -1.48
GAL4	YPL248C	RNA1	P11745	407 aa	Known RBP	5.79	□□□□□ -1.48
GAL4	YPL248C	POL1	P13382	1468 aa		5.79	□□□□□ -1.48
GAL4	YPL248C	MET10	P39692	1035 aa		5.78	□□□□□ -1.48
GAL4	YPL248C	HOS4	P40480	1083 aa		5.78	□□□□□ -1.48
GAL4	YPL248C	ATG2	P53855	1592 aa		5.78	□□□□□ -1.48
GAL4	YPL248C	PLP2	Q12017	286 aa		5.78	□□□□□ -1.48
GAL4	YPL248C	STU1	P38198	1513 aa		5.77	□□□□□ -1.49
GAL4	YPL248C	SEC9	P40357	651 aa		5.76	□□□□□ -1.49
GAL4	YPL248C	MEH1	Q02205	184 aa		5.76	□□□□□ -1.49
GAL4	YPL248C	PKH1	Q03407	766 aa		5.76	□□□□□ -1.49
GAL4	YPL248C	BUD4	P47136	1447 aa		5.76	□□□□□ -1.49
GAL4	YPL248C	YPK9	Q12697	1472 aa		5.76	□□□□□ -1.49
GAL4	YPL248C	CEF1	Q03654	590 aa	Predicted RBP	5.76	□□□□□ -1.49
GAL4	YPL248C	SSA4	P22202	642 aa	Known RBP	5.75	□□□□□ -1.49
GAL4	YPL248C	NFU1	P32860	256 aa		5.75	□□□□□ -1.49
GAL4	YPL248C	ENP1	P38333	483 aa	Known RBP	5.75	□□□□□ -1.49
GAL4	YPL248C	ALD4	P46367	519 aa	Known RBP	5.75	□□□□□ -1.49
GAL4	YPL248C	RRN6	P32786	894 aa		5.74	□□□□□ -1.49
GAL4	YPL248C	NMD3	P38861	518 aa	Known RBP	5.74	□□□□□ -1.49
GAL4	YPL248C	SUB2	Q07478	446 aa	Known RBP	5.74	□□□□□ -1.49
GAL4	YPL248C	NOP53	Q12080	455 aa	Known RBP	5.74	□□□□□ -1.49
GAL4	YPL248C	POL5	P39985	1022 aa	Known RBP	5.74	□□□□□ -1.49
GAL4	YPL248C	YAF9	P53930	226 aa		5.74	□□□□□ -1.49
GAL4	YPL248C	GDE1	Q02979	1223 aa		5.74	□□□□□ -1.49
GAL4	YPL248C	TOM20	P35180	183 aa		5.73	□□□□□ -1.49
GAL4	YPL248C	TY1B-A	O13527	1196 aa	Known RBP	5.73	□□□□□ -1.49
GAL4	YPL248C	FAF1	P40546	346 aa	Predicted RBP	5.73	□□□□□ -1.49
GAL4	YPL248C	YDL121C	Q07541	149 aa		5.73	□□□□□ -1.49
GAL4	YPL248C	SPT21	P35209	758 aa		5.72	□□□□□ -1.49
GAL4	YPL248C	BOI2	P39969	1040 aa		5.72	□□□□□ -1.49
GAL4	YPL248C	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
GAL4	YPL248C	ECM5	Q03214	1411 aa		5.71	□□□□□ -1.5
GAL4	YPL248C	VMA4	P22203	233 aa	Known RBP	5.71	□□□□□ -1.5
GAL4	YPL248C	YNL011C	P53980	444 aa		5.71	□□□□□ -1.5
GAL4	YPL248C	SVL3	Q03088	825 aa	Known RBP	5.71	□□□□□ -1.5
GAL4	YPL248C	PEP1	P32319	1579 aa		5.7	□□□□□ -1.5
GAL4	YPL248C	PEA2	P40091	420 aa		5.7	□□□□□ -1.5
GAL4	YPL248C	DJP1	P40564	432 aa		5.7	□□□□□ -1.5
GAL4	YPL248C	BPT1	P14772	1559 aa		5.69	□□□□□ -1.5
GAL4	YPL248C	RAD51	P25454	400 aa		5.69	□□□□□ -1.5
GAL4	YPL248C	PES4	P39684	611 aa		5.69	□□□□□ -1.5
GAL4	YPL248C	RKR1	Q04781	1562 aa		5.69	□□□□□ -1.5
GAL4	YPL248C	YOR1	P53049	1477 aa		5.69	□□□□□ -1.5
GAL4	YPL248C	TPM2	P40414	161 aa		5.69	□□□□□ -1.5
GAL4	YPL248C	MTR4	P47047	1073 aa	Known RBP	5.69	□□□□□ -1.5
GAL4	YPL248C	SCC2	Q04002	1493 aa		5.68	□□□□□ -1.5
GAL4	YPL248C	ERP2	P39704	215 aa		5.68	□□□□□ -1.5
GAL4	YPL248C	SEN54	Q02825	467 aa	Predicted RBP	5.68	□□□□□ -1.5
GAL4	YPL248C	CFT2	Q12102	859 aa	Predicted RBP	5.68	□□□□□ -1.5
GAL4	YPL248C	SNU66	Q12420	587 aa	Predicted RBP	5.68	□□□□□ -1.5
GAL4	YPL248C	FPR4	Q06205	392 aa	Predicted RBP	5.68	□□□□□ -1.5
GAL4	YPL248C	CLF1	Q12309	687 aa	Predicted RBP	5.68	□□□□□ -1.5
GAL4	YPL248C	YDR341C	Q05506	607 aa	Known RBP	5.67	□□□□□ -1.5
GAL4	YPL248C	YSH1	Q06224	779 aa	Predicted RBP	5.67	□□□□□ -1.5
GAL4	YPL248C	SSF2	Q12153	453 aa	Predicted RBP	5.67	□□□□□ -1.5
GAL4	YPL248C	MYO4	P32492	1471 aa		5.67	□□□□□ -1.5
GAL4	YPL248C	PWP2	P25635	923 aa	Known RBP	5.67	□□□□□ -1.5
GAL4	YPL248C	LEM3	P42838	414 aa		5.67	□□□□□ -1.5
GAL4	YPL248C	RPO31	P04051	1460 aa		5.66	□□□□□ -1.5
GAL4	YPL248C	RCF1	Q03713	159 aa		5.66	□□□□□ -1.5
GAL4	YPL248C	NMD2	P38798	1089 aa	Known RBP	5.66	□□□□□ -1.5
GAL4	YPL248C	FUN12	P39730	1002 aa	Known RBP	5.66	□□□□□ -1.5
GAL4	YPL248C	CST6	P40535	587 aa		5.66	□□□□□ -1.5
GAL4	YPL248C	DNM1	P54861	757 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms