RNA–Protein interactions for RNA: YOL004W

SIN3, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene SIN3, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIN3YOL004W DIP2Q12220 943 aaPredicted RBP4.46□□□□□ -1.69
SIN3YOL004W SCT1P32784 759 aa4.46□□□□□ -1.7
SIN3YOL004W MRX12P47084 519 aa4.46□□□□□ -1.7
SIN3YOL004W RSC30P38781 883 aa4.45□□□□□ -1.7
SIN3YOL004W YEF3P16521 1044 aaKnown RBP4.45□□□□□ -1.7
SIN3YOL004W YBL086CP38177 466 aa4.44□□□□□ -1.7
SIN3YOL004W UFD4P33202 1483 aa4.44□□□□□ -1.7
SIN3YOL004W STH1P32597 1359 aa4.44□□□□□ -1.7
SIN3YOL004W SSA2P10592 639 aaKnown RBP4.44□□□□□ -1.7
SIN3YOL004W AVT3P36062 692 aa4.43□□□□□ -1.7
SIN3YOL004W PAN1P32521 1480 aa4.43□□□□□ -1.7
SIN3YOL004W YOR1P53049 1477 aa4.43□□□□□ -1.7
SIN3YOL004W SIN3P22579 1536 aa4.43□□□□□ -1.7
SIN3YOL004W SRF1Q12516 437 aa4.42□□□□□ -1.7
SIN3YOL004W NUP159P40477 1460 aa4.42□□□□□ -1.7
SIN3YOL004W LEO1P38439 464 aa4.42□□□□□ -1.7
SIN3YOL004W MMS22Q06164 1454 aa4.42□□□□□ -1.7
SIN3YOL004W MYO4P32492 1471 aa4.42□□□□□ -1.7
SIN3YOL004W THI12P42883 340 aa4.41□□□□□ -1.7
SIN3YOL004W THI5P43534 340 aa4.41□□□□□ -1.7
SIN3YOL004W THI11P47183 340 aa4.41□□□□□ -1.7
SIN3YOL004W THI13Q07748 340 aa4.41□□□□□ -1.7
SIN3YOL004W DMA1P38823 416 aa4.41□□□□□ -1.7
SIN3YOL004W NTE1Q04958 1679 aa4.4□□□□□ -1.71
SIN3YOL004W BUD3P25558 1636 aa4.4□□□□□ -1.71
SIN3YOL004W SPP41P38904 1435 aa4.39□□□□□ -1.71
SIN3YOL004W TIF6Q12522 245 aaKnown RBP4.38□□□□□ -1.71
SIN3YOL004W FKH1P40466 484 aa4.38□□□□□ -1.71
SIN3YOL004W DNF2Q12675 1612 aa4.38□□□□□ -1.71
SIN3YOL004W NUP157P40064 1391 aaKnown RBP4.37□□□□□ -1.71
SIN3YOL004W XRN1P22147 1528 aaKnown RBP4.37□□□□□ -1.71
SIN3YOL004W PDR15Q04182 1529 aaKnown RBP4.37□□□□□ -1.71
SIN3YOL004W SSN2P38931 1420 aa4.36□□□□□ -1.71
SIN3YOL004W BSD2P38356 321 aa4.36□□□□□ -1.71
SIN3YOL004W STS1P38637 319 aa4.36□□□□□ -1.71
SIN3YOL004W PDR11P40550 1411 aa4.35□□□□□ -1.71
SIN3YOL004W SMC4Q12267 1418 aa4.34□□□□□ -1.71
SIN3YOL004W PSD2P53037 1138 aaKnown RBP4.34□□□□□ -1.72
SIN3YOL004W YER156CP40093 338 aaKnown RBP4.33□□□□□ -1.72
SIN3YOL004W PDR10P51533 1564 aa4.33□□□□□ -1.72
SIN3YOL004W HAP1P0CE41 1502 aa4.32□□□□□ -1.72
SIN3YOL004W GLC3P32775 704 aa4.32□□□□□ -1.72
SIN3YOL004W CTT1P06115 562 aa4.31□□□□□ -1.72
SIN3YOL004W MSC7P38694 644 aa4.31□□□□□ -1.72
SIN3YOL004W PUS5Q06244 254 aa4.31□□□□□ -1.72
SIN3YOL004W YFL040WP43562 540 aa4.31□□□□□ -1.72
SIN3YOL004W TY3B-GQ99315 1547 aa4.3□□□□□ -1.72
SIN3YOL004W ENT1Q12518 454 aa4.3□□□□□ -1.72
SIN3YOL004W ESP1Q03018 1630 aa4.3□□□□□ -1.72
SIN3YOL004W WHI3P34761 661 aaKnown RBP4.29□□□□□ -1.72
SIN3YOL004W IQG1Q12280 1495 aa4.28□□□□□ -1.72
SIN3YOL004W SRB8P25648 1427 aa4.28□□□□□ -1.72
SIN3YOL004W FBP1P09201 348 aa4.28□□□□□ -1.72
SIN3YOL004W HPC2Q01448 625 aa4.28□□□□□ -1.72
SIN3YOL004W BDF1P35817 686 aa4.27□□□□□ -1.73
SIN3YOL004W YNR014WP53719 212 aa4.27□□□□□ -1.73
SIN3YOL004W SQS1P53866 767 aaKnown RBP4.27□□□□□ -1.73
SIN3YOL004W CFT1Q06632 1357 aaKnown RBP4.26□□□□□ -1.73
SIN3YOL004W GEA1P47102 1408 aaPredicted RBP4.26□□□□□ -1.73
SIN3YOL004W TAF5P38129 798 aa4.26□□□□□ -1.73
SIN3YOL004W IES2P40154 320 aa4.26□□□□□ -1.73
SIN3YOL004W NCS6P53088 359 aa4.26□□□□□ -1.73
SIN3YOL004W FPK1P53739 893 aa4.26□□□□□ -1.73
SIN3YOL004W APP1P53933 587 aa4.25□□□□□ -1.73
SIN3YOL004W BNI1P41832 1953 aa4.25□□□□□ -1.73
SIN3YOL004W AIM7Q12156 149 aa4.25□□□□□ -1.73
SIN3YOL004W SLI15P38283 698 aa4.24□□□□□ -1.73
SIN3YOL004W SNT2P53127 1403 aa4.24□□□□□ -1.73
SIN3YOL004W SSA4P22202 642 aaKnown RBP4.23□□□□□ -1.73
SIN3YOL004W RPG1P38249 964 aaKnown RBP4.23□□□□□ -1.73
SIN3YOL004W FAA3P39002 694 aa4.23□□□□□ -1.73
SIN3YOL004W MCM6P53091 1017 aaKnown RBP4.23□□□□□ -1.73
SIN3YOL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
SIN3YOL004W STU1P38198 1513 aa4.22□□□□□ -1.73
SIN3YOL004W TIF4632P39936 914 aaKnown RBP4.22□□□□□ -1.73
SIN3YOL004W MSN5P52918 1224 aa4.22□□□□□ -1.73
SIN3YOL004W BUG1Q12191 341 aa4.22□□□□□ -1.73
SIN3YOL004W YKL222CP35995 705 aa4.22□□□□□ -1.73
SIN3YOL004W MEC3Q02574 474 aa4.21□□□□□ -1.74
SIN3YOL004W ATG13Q06628 738 aa4.2□□□□□ -1.74
SIN3YOL004W IML1P47170 1584 aa4.2□□□□□ -1.74
SIN3YOL004W PRP5P21372 849 aaPredicted RBP4.2□□□□□ -1.74
SIN3YOL004W CHZ1P40019 153 aaPredicted RBP4.2□□□□□ -1.74
SIN3YOL004W REB1P21538 810 aa4.19□□□□□ -1.74
SIN3YOL004W TY1B-NL2Q99337 1749 aaKnown RBP4.19□□□□□ -1.74
SIN3YOL004W RPS9AO13516 197 aaKnown RBP4.19□□□□□ -1.74
SIN3YOL004W RSF2P46974 1380 aa4.18□□□□□ -1.74
SIN3YOL004W ROM2P51862 1356 aaKnown RBP4.18□□□□□ -1.74
SIN3YOL004W BCK1Q01389 1478 aa4.18□□□□□ -1.74
SIN3YOL004W PSK1P31374 1356 aa4.18□□□□□ -1.74
SIN3YOL004W FRK1Q03002 865 aaPredicted RBP4.18□□□□□ -1.74
SIN3YOL004W FMP30Q02883 468 aa4.18□□□□□ -1.74
SIN3YOL004W AIM44Q99299 758 aa4.18□□□□□ -1.74
SIN3YOL004W DOP1Q03921 1698 aa4.17□□□□□ -1.74
SIN3YOL004W VHR2P40041 505 aa4.17□□□□□ -1.74
SIN3YOL004W TSC11P40061 1430 aa4.17□□□□□ -1.74
SIN3YOL004W PTP3P40048 928 aa4.17□□□□□ -1.74
SIN3YOL004W ATG2P53855 1592 aa4.17□□□□□ -1.74
SIN3YOL004W YMR084WA2P2R3 262 aa4.16□□□□□ -1.74
SIN3YOL004W RPN11P43588 306 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms