RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C TY1B-DR6P0C2I3 1755 aa8□□□□□ -1.13
PXR1YGR280C TY1B-LR2P0C2I5 1755 aa8□□□□□ -1.13
PXR1YGR280C TY1B-LR3P0C2I6 1755 aaKnown RBP8□□□□□ -1.13
PXR1YGR280C TY1B-PR1P0C2I9 1755 aaKnown RBP8□□□□□ -1.13
PXR1YGR280C TY1B-PR2P0C2J0 1756 aa8□□□□□ -1.13
PXR1YGR280C TY1B-PR3P0C2J1 1755 aaKnown RBP8□□□□□ -1.13
PXR1YGR280C TY1B-JR1P47098 1755 aa8□□□□□ -1.13
PXR1YGR280C TY1B-ML2Q03434 1755 aaKnown RBP8□□□□□ -1.13
PXR1YGR280C TY1B-ER1Q03612 1755 aa8□□□□□ -1.13
PXR1YGR280C TY1B-ML1Q04711 1755 aaKnown RBP8□□□□□ -1.13
PXR1YGR280C TY1B-GR2Q12269 1755 aa8□□□□□ -1.13
PXR1YGR280C TY1B-OLQ12273 1755 aa8□□□□□ -1.13
PXR1YGR280C TY1B-PLQ12414 1755 aaKnown RBP8□□□□□ -1.13
PXR1YGR280C YKR023WP36119 530 aaKnown RBP7.99□□□□□ -1.13
PXR1YGR280C NUP170P38181 1502 aa7.98□□□□□ -1.13
PXR1YGR280C TY2B-BQ12491 1770 aa7.97□□□□□ -1.13
PXR1YGR280C DIP2Q12220 943 aaPredicted RBP7.96□□□□□ -1.14
PXR1YGR280C NTE1Q04958 1679 aa7.95□□□□□ -1.14
PXR1YGR280C TOP2P06786 1428 aaKnown RBP7.95□□□□□ -1.14
PXR1YGR280C SLX5P32828 619 aaKnown RBP7.92□□□□□ -1.14
PXR1YGR280C SSN2P38931 1420 aa7.92□□□□□ -1.14
PXR1YGR280C SCY1P53009 804 aa7.91□□□□□ -1.14
PXR1YGR280C TY1B-DR3Q99231 1755 aa7.89□□□□□ -1.15
PXR1YGR280C DOP1Q03921 1698 aa7.89□□□□□ -1.15
PXR1YGR280C SPP41P38904 1435 aa7.85□□□□□ -1.15
PXR1YGR280C DCD1P06773 312 aa7.84□□□□□ -1.15
PXR1YGR280C SPO14P36126 1683 aa7.83□□□□□ -1.16
PXR1YGR280C RPO21P04050 1733 aaKnown RBP7.82□□□□□ -1.16
PXR1YGR280C TFC8Q12308 588 aa7.82□□□□□ -1.16
PXR1YGR280C HOP09932 586 aa7.81□□□□□ -1.16
PXR1YGR280C TY1B-JR2P47100 1755 aaKnown RBP7.81□□□□□ -1.16
PXR1YGR280C TY1B-ER2Q03619 1755 aa7.81□□□□□ -1.16
PXR1YGR280C TY1B-MR1Q04214 1755 aa7.81□□□□□ -1.16
PXR1YGR280C TY1B-MR2Q04670 1755 aaKnown RBP7.81□□□□□ -1.16
PXR1YGR280C TY1B-LR1Q12088 1755 aaKnown RBP7.81□□□□□ -1.16
PXR1YGR280C TY1B-NL1Q12112 1755 aa7.81□□□□□ -1.16
PXR1YGR280C TY1B-GR1Q12141 1755 aa7.81□□□□□ -1.16
PXR1YGR280C TY1B-BLQ12490 1755 aa7.81□□□□□ -1.16
PXR1YGR280C BFR2Q06631 534 aaKnown RBP7.8□□□□□ -1.16
PXR1YGR280C ULS1Q08562 1619 aa7.8□□□□□ -1.16
PXR1YGR280C TSC11P40061 1430 aa7.78□□□□□ -1.16
PXR1YGR280C PDR15Q04182 1529 aaKnown RBP7.78□□□□□ -1.16
PXR1YGR280C MET10P39692 1035 aa7.77□□□□□ -1.17
PXR1YGR280C VTH1P40438 1549 aa7.77□□□□□ -1.17
PXR1YGR280C VTH2P40890 1549 aa7.77□□□□□ -1.17
PXR1YGR280C TRM3Q07527 1436 aa7.77□□□□□ -1.17
PXR1YGR280C YBL029C-AQ3E756 94 aa7.75□□□□□ -1.17
PXR1YGR280C SNT2P53127 1403 aa7.74□□□□□ -1.17
PXR1YGR280C PDR10P51533 1564 aa7.73□□□□□ -1.17
PXR1YGR280C DNF3Q12674 1656 aa7.72□□□□□ -1.17
PXR1YGR280C SMC4Q12267 1418 aa7.7□□□□□ -1.18
PXR1YGR280C GLN1P32288 370 aaKnown RBP7.68□□□□□ -1.18
PXR1YGR280C IQG1Q12280 1495 aa7.67□□□□□ -1.18
PXR1YGR280C MYO4P32492 1471 aa7.66□□□□□ -1.18
PXR1YGR280C ARO1P08566 1588 aaKnown RBP7.65□□□□□ -1.18
PXR1YGR280C SPT21P35209 758 aa7.65□□□□□ -1.18
PXR1YGR280C YOR1P53049 1477 aa7.64□□□□□ -1.19
PXR1YGR280C MAK10Q02197 733 aa7.63□□□□□ -1.19
PXR1YGR280C YTA7P40340 1379 aa7.62□□□□□ -1.19
PXR1YGR280C RTT106P40161 455 aa7.62□□□□□ -1.19
PXR1YGR280C GDB1Q06625 1536 aa7.62□□□□□ -1.19
PXR1YGR280C POL1P13382 1468 aa7.62□□□□□ -1.19
PXR1YGR280C BNR1P40450 1375 aa7.6□□□□□ -1.19
PXR1YGR280C MST1P07236 462 aa7.59□□□□□ -1.19
PXR1YGR280C AVT3P36062 692 aa7.59□□□□□ -1.19
PXR1YGR280C YAP3P38749 330 aa7.59□□□□□ -1.19
PXR1YGR280C AIR2Q12476 344 aaKnown RBP7.59□□□□□ -1.19
PXR1YGR280C SNQ2P32568 1501 aaKnown RBP7.58□□□□□ -1.2
PXR1YGR280C VNX1P42839 908 aa7.58□□□□□ -1.2
PXR1YGR280C YJL171CP46992 396 aa7.58□□□□□ -1.2
PXR1YGR280C PDR12Q02785 1511 aa7.57□□□□□ -1.2
PXR1YGR280C BUD3P25558 1636 aa7.56□□□□□ -1.2
PXR1YGR280C STU1P38198 1513 aa7.56□□□□□ -1.2
PXR1YGR280C NUP157P40064 1391 aaKnown RBP7.56□□□□□ -1.2
PXR1YGR280C USO1P25386 1790 aa7.55□□□□□ -1.2
PXR1YGR280C CHC1P22137 1653 aaKnown RBP7.53□□□□□ -1.2
PXR1YGR280C MLP2P40457 1679 aa7.53□□□□□ -1.2
PXR1YGR280C THI12P42883 340 aa7.52□□□□□ -1.21
PXR1YGR280C THI5P43534 340 aa7.52□□□□□ -1.21
PXR1YGR280C THI11P47183 340 aa7.52□□□□□ -1.21
PXR1YGR280C THI13Q07748 340 aa7.52□□□□□ -1.21
PXR1YGR280C TY3B-GQ99315 1547 aa7.51□□□□□ -1.21
PXR1YGR280C YSP2Q06681 1438 aa7.51□□□□□ -1.21
PXR1YGR280C FKH1P40466 484 aa7.5□□□□□ -1.21
PXR1YGR280C STH1P32597 1359 aa7.49□□□□□ -1.21
PXR1YGR280C BCH2P36122 765 aa7.49□□□□□ -1.21
PXR1YGR280C YIL055CP40523 627 aaKnown RBP7.49□□□□□ -1.21
PXR1YGR280C SPP1Q03012 353 aa7.49□□□□□ -1.21
PXR1YGR280C RRD1P40454 393 aaKnown RBP7.48□□□□□ -1.21
PXR1YGR280C YMR196WQ04336 1088 aa7.47□□□□□ -1.21
PXR1YGR280C YAH1Q12184 172 aaKnown RBP7.47□□□□□ -1.21
PXR1YGR280C YOR238WQ08634 303 aa7.43□□□□□ -1.22
PXR1YGR280C APP1P53933 587 aa7.41□□□□□ -1.22
PXR1YGR280C URN1Q06525 465 aaKnown RBP7.37□□□□□ -1.23
PXR1YGR280C YMR074CQ04773 145 aa7.36□□□□□ -1.23
PXR1YGR280C HAP1P0CE41 1502 aa7.33□□□□□ -1.24
PXR1YGR280C RGA2Q06407 1009 aa7.32□□□□□ -1.24
PXR1YGR280C WSC3Q12215 556 aa7.32□□□□□ -1.24
PXR1YGR280C BMT6Q12291 365 aa7.32□□□□□ -1.24
PXR1YGR280C TY1B-NL2Q99337 1749 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms