RNA–Protein interactions for RNA: YFL007W

BLM10, Transcript of Proteasome activator, yeast

Gene BLM10, Length 6,432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BLM10	YFL007W	HUL5	P53119	910 aa		5.59	□□□□□ -1.51
BLM10	YFL007W	YTA7	P40340	1379 aa		5.59	□□□□□ -1.51
BLM10	YFL007W	BRL1	P38770	471 aa		5.59	□□□□□ -1.51
BLM10	YFL007W	DSL1	P53847	754 aa		5.59	□□□□□ -1.52
BLM10	YFL007W	NOC3	Q07896	663 aa	Predicted RBP	5.58	□□□□□ -1.52
BLM10	YFL007W	SWE1	P32944	819 aa		5.58	□□□□□ -1.52
BLM10	YFL007W	RAD2	P07276	1031 aa		5.57	□□□□□ -1.52
BLM10	YFL007W	TAN1	P53072	289 aa	Predicted RBP	5.57	□□□□□ -1.52
BLM10	YFL007W	IMH1	Q06704	911 aa	Known RBP	5.57	□□□□□ -1.52
BLM10	YFL007W	MPP10	P47083	593 aa	Known RBP	5.56	□□□□□ -1.52
BLM10	YFL007W	RPT2	P40327	437 aa	Known RBP	5.55	□□□□□ -1.52
BLM10	YFL007W	BTN2	P53286	410 aa		5.55	□□□□□ -1.52
BLM10	YFL007W	SLD2	P34252	453 aa		5.55	□□□□□ -1.52
BLM10	YFL007W	VPS27	P40343	622 aa	Known RBP	5.55	□□□□□ -1.52
BLM10	YFL007W	MAK16	P10962	306 aa	Predicted RBP	5.54	□□□□□ -1.52
BLM10	YFL007W	RRN3	P36070	627 aa		5.54	□□□□□ -1.52
BLM10	YFL007W	TMA64	Q04600	565 aa	Known RBP	5.54	□□□□□ -1.52
BLM10	YFL007W	TY4A-J	P47023	414 aa		5.54	□□□□□ -1.52
BLM10	YFL007W	FAR11	P53917	953 aa		5.54	□□□□□ -1.52
BLM10	YFL007W	SYH1	Q02875	849 aa	Known RBP	5.54	□□□□□ -1.52
BLM10	YFL007W	RCF1	Q03713	159 aa		5.54	□□□□□ -1.52
BLM10	YFL007W	RTP1	Q12751	981 aa		5.54	□□□□□ -1.52
BLM10	YFL007W	PRP3	Q03338	469 aa	Predicted RBP	5.52	□□□□□ -1.53
BLM10	YFL007W	YLH47	Q06493	454 aa		5.52	□□□□□ -1.53
BLM10	YFL007W	RED1	P14291	827 aa		5.52	□□□□□ -1.53
BLM10	YFL007W	SSA1	P10591	642 aa	Known RBP	5.52	□□□□□ -1.53
BLM10	YFL007W	SSA2	P10592	639 aa	Known RBP	5.52	□□□□□ -1.53
BLM10	YFL007W	MIC60	P36112	540 aa		5.52	□□□□□ -1.53
BLM10	YFL007W	YGR130C	P53278	816 aa		5.52	□□□□□ -1.53
BLM10	YFL007W	SPT8	P38915	602 aa		5.51	□□□□□ -1.53
BLM10	YFL007W	MDM38	Q08179	573 aa		5.51	□□□□□ -1.53
BLM10	YFL007W	SEC20	P28791	383 aa		5.51	□□□□□ -1.53
BLM10	YFL007W	RPG1	P38249	964 aa	Known RBP	5.51	□□□□□ -1.53
BLM10	YFL007W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	not detected
BLM10	YFL007W	MDG1	P53885	366 aa		5.51	□□□□□ -1.53
BLM10	YFL007W	DEP1	P31385	405 aa		5.5	□□□□□ -1.53
BLM10	YFL007W	GEF1	P37020	779 aa		5.5	□□□□□ -1.53
BLM10	YFL007W	OCA1	P50946	238 aa	Predicted RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	YNL247W	P53852	767 aa	Known RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	SMY2	P32909	740 aa	Known RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	TLG1	Q03322	224 aa		5.5	□□□□□ -1.53
BLM10	YFL007W	SAS3	P34218	831 aa		5.5	□□□□□ -1.53
BLM10	YFL007W	VMS1	Q04311	632 aa	Known RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	IES1	P43579	692 aa		5.5	□□□□□ -1.53
BLM10	YFL007W	VMA4	P22203	233 aa	Known RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	PUF6	Q04373	656 aa	Known RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	BRE1	Q07457	700 aa	Known RBP	5.5	□□□□□ -1.53
BLM10	YFL007W	YVC1	Q12324	675 aa		5.49	□□□□□ -1.53
BLM10	YFL007W	PKC1	P24583	1151 aa		5.49	□□□□□ -1.53
BLM10	YFL007W	YKR023W	P36119	530 aa	Known RBP	5.49	□□□□□ -1.53
BLM10	YFL007W	CLC1	P17891	233 aa		5.49	□□□□□ -1.53
BLM10	YFL007W	YKL100C	P34248	587 aa		5.49	□□□□□ -1.53
BLM10	YFL007W	DJP1	P40564	432 aa		5.49	□□□□□ -1.53
BLM10	YFL007W	HOS2	P53096	452 aa	Predicted RBP	5.49	□□□□□ -1.53
BLM10	YFL007W	SPT6	P23615	1451 aa	Known RBP	5.49	□□□□□ -1.53
BLM10	YFL007W	BOI2	P39969	1040 aa		5.49	□□□□□ -1.53
BLM10	YFL007W	UTP14	Q04500	899 aa	Known RBP	5.49	□□□□□ -1.53
BLM10	YFL007W	KAR3	P17119	729 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	YAF9	P53930	226 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	ESC2	Q06340	456 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	SRB7	P47822	140 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	JJJ1	P53863	590 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	YPR148C	Q06523	435 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	TSR1	Q07381	788 aa	Known RBP	5.48	□□□□□ -1.53
BLM10	YFL007W	PEX5	P35056	612 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	YNL011C	P53980	444 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	PET100	P38958	111 aa		5.48	□□□□□ -1.53
BLM10	YFL007W	TY4B-P	A0A0B7P3V8	1104 aa		5.47	□□□□□ -1.53
BLM10	YFL007W	BRN1	P38170	754 aa		5.47	□□□□□ -1.53
BLM10	YFL007W	GIR2	Q03768	265 aa	Predicted RBP	5.47	□□□□□ -1.53
BLM10	YFL007W	CCL1	P37366	393 aa		5.47	□□□□□ -1.53
BLM10	YFL007W	NKP1	Q12493	238 aa		5.46	□□□□□ -1.53
BLM10	YFL007W	POL5	P39985	1022 aa	Known RBP	5.46	□□□□□ -1.54
BLM10	YFL007W	SMC3	P47037	1230 aa		5.46	□□□□□ -1.54
BLM10	YFL007W	ENV11	P53246	860 aa		5.46	□□□□□ -1.54
BLM10	YFL007W	PUS1	Q12211	544 aa	Known RBP	5.46	□□□□□ -1.54
BLM10	YFL007W	ZUO1	P32527	433 aa	Known RBP	5.45	□□□□□ -1.54
BLM10	YFL007W	DSN1	P40568	576 aa		5.45	□□□□□ -1.54
BLM10	YFL007W	NHA1	Q99271	985 aa		5.45	□□□□□ -1.54
BLM10	YFL007W	MEI5	P32489	222 aa		5.45	□□□□□ -1.54
BLM10	YFL007W	NOC2	P39744	710 aa	Known RBP	5.45	□□□□□ -1.54
BLM10	YFL007W	CWC21	Q03375	135 aa	Known RBP	5.45	□□□□□ -1.54
BLM10	YFL007W	MEF1	P25039	761 aa		5.45	□□□□□ -1.54
BLM10	YFL007W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
BLM10	YFL007W	ECM16	Q04217	1267 aa	Known RBP	5.45	□□□□□ -1.54
BLM10	YFL007W	RRP14	P36080	434 aa	Known RBP	5.45	□□□□□ -1.54
BLM10	YFL007W	NMD3	P38861	518 aa	Known RBP	5.45	□□□□□ -1.54
BLM10	YFL007W	PKH1	Q03407	766 aa		5.45	□□□□□ -1.54
BLM10	YFL007W	APL5	Q08951	932 aa	Known RBP	5.44	□□□□□ -1.54
BLM10	YFL007W	SPC110	P32380	944 aa		5.44	□□□□□ -1.54
BLM10	YFL007W	NPR3	P38742	1146 aa		5.44	□□□□□ -1.54
BLM10	YFL007W	TAF1	P46677	1066 aa		5.44	□□□□□ -1.54
BLM10	YFL007W	TAF2	P23255	1407 aa		5.44	□□□□□ -1.54
BLM10	YFL007W	REI1	P38344	393 aa	Predicted RBP	5.44	□□□□□ -1.54
BLM10	YFL007W	HPC2	Q01448	625 aa		5.44	□□□□□ -1.54
BLM10	YFL007W	PWP2	P25635	923 aa	Known RBP	5.43	□□□□□ -1.54
BLM10	YFL007W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
BLM10	YFL007W	CAJ1	P39101	391 aa		5.43	□□□□□ -1.54
BLM10	YFL007W	RTS3	P53289	263 aa		5.43	□□□□□ -1.54
BLM10	YFL007W	KEX1	P09620	729 aa		5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms