RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C TY1B-DR3Q99231 1755 aa2.84□□□□□ -1.96
MSH3YCR092C BNI1P41832 1953 aa2.83□□□□□ -1.96
MSH3YCR092C RPO21P04050 1733 aaKnown RBP2.83□□□□□ -1.96
MSH3YCR092C POL1P13382 1468 aa2.83□□□□□ -1.96
MSH3YCR092C BUD3P25558 1636 aa2.83□□□□□ -1.96
MSH3YCR092C NTE1Q04958 1679 aa2.82□□□□□ -1.96
MSH3YCR092C SPT21P35209 758 aa2.82□□□□□ -1.96
MSH3YCR092C PTP3P40048 928 aa2.82□□□□□ -1.96
MSH3YCR092C PDR12Q02785 1511 aa2.82□□□□□ -1.96
MSH3YCR092C GEA2P39993 1459 aaKnown RBP2.82□□□□□ -1.96
MSH3YCR092C YKR023WP36119 530 aaKnown RBP2.82□□□□□ -1.96
MSH3YCR092C MYO4P32492 1471 aa2.81□□□□□ -1.96
MSH3YCR092C GTT3P39996 337 aa2.81□□□□□ -1.96
MSH3YCR092C MLP2P40457 1679 aa2.8□□□□□ -1.96
MSH3YCR092C YOR1P53049 1477 aa2.8□□□□□ -1.96
MSH3YCR092C TY1B-JR2P47100 1755 aaKnown RBP2.8□□□□□ -1.96
MSH3YCR092C TY1B-ER2Q03619 1755 aa2.8□□□□□ -1.96
MSH3YCR092C TY1B-MR1Q04214 1755 aa2.8□□□□□ -1.96
MSH3YCR092C TY1B-MR2Q04670 1755 aaKnown RBP2.8□□□□□ -1.96
MSH3YCR092C TY1B-LR1Q12088 1755 aaKnown RBP2.8□□□□□ -1.96
MSH3YCR092C TY1B-NL1Q12112 1755 aa2.8□□□□□ -1.96
MSH3YCR092C TY1B-GR1Q12141 1755 aa2.8□□□□□ -1.96
MSH3YCR092C TY1B-BLQ12490 1755 aa2.8□□□□□ -1.96
MSH3YCR092C DOP1Q03921 1698 aa2.8□□□□□ -1.96
MSH3YCR092C STU1P38198 1513 aa2.79□□□□□ -1.96
MSH3YCR092C SPO14P36126 1683 aa2.79□□□□□ -1.96
MSH3YCR092C UBP10P53874 792 aaPredicted RBP2.79□□□□□ -1.96
MSH3YCR092C UFD4P33202 1483 aa2.78□□□□□ -1.96
MSH3YCR092C MMS22Q06164 1454 aa2.77□□□□□ -1.97
MSH3YCR092C DNF2Q12675 1612 aa2.77□□□□□ -1.97
MSH3YCR092C YOR093CQ12275 1648 aa2.77□□□□□ -1.97
MSH3YCR092C YRF1-1P0CX20 1796 aa2.77□□□□□ -1.97
MSH3YCR092C YRF1-5P0CX21 1796 aa2.77□□□□□ -1.97
MSH3YCR092C YRF1-8P0CX22 1796 aa2.77□□□□□ -1.97
MSH3YCR092C SLX5P32828 619 aaKnown RBP2.77□□□□□ -1.97
MSH3YCR092C MAP2P38174 421 aaKnown RBP2.76□□□□□ -1.97
MSH3YCR092C TFC8Q12308 588 aa2.76□□□□□ -1.97
MSH3YCR092C NUP170P38181 1502 aa2.76□□□□□ -1.97
MSH3YCR092C TFA1P36100 482 aa2.75□□□□□ -1.97
MSH3YCR092C SCY1P53009 804 aa2.75□□□□□ -1.97
MSH3YCR092C YAH1Q12184 172 aaKnown RBP2.75□□□□□ -1.97
MSH3YCR092C MIF2P35201 549 aa2.75□□□□□ -1.97
MSH3YCR092C HOP09932 586 aa2.74□□□□□ -1.97
MSH3YCR092C PDR10P51533 1564 aa2.74□□□□□ -1.97
MSH3YCR092C BBC1P47068 1157 aa2.74□□□□□ -1.97
MSH3YCR092C VPS15P22219 1454 aa2.74□□□□□ -1.97
MSH3YCR092C CHC1P22137 1653 aaKnown RBP2.73□□□□□ -1.97
MSH3YCR092C BUD31P25337 157 aaPredicted RBP2.73□□□□□ -1.97
MSH3YCR092C GDB1Q06625 1536 aa2.73□□□□□ -1.97
MSH3YCR092C DCD1P06773 312 aa2.73□□□□□ -1.97
MSH3YCR092C SNQ2P32568 1501 aaKnown RBP2.73□□□□□ -1.97
MSH3YCR092C VTH1P40438 1549 aa2.73□□□□□ -1.97
MSH3YCR092C VTH2P40890 1549 aa2.73□□□□□ -1.97
MSH3YCR092C TRM732Q03496 1420 aa2.72□□□□□ -1.97
MSH3YCR092C YJL171CP46992 396 aa2.72□□□□□ -1.97
MSH3YCR092C TY1B-NL2Q99337 1749 aaKnown RBP2.72□□□□□ -1.97
MSH3YCR092C NUP159P40477 1460 aa2.71□□□□□ -1.98
MSH3YCR092C RIM101P33400 625 aa2.71□□□□□ -1.98
MSH3YCR092C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
MSH3YCR092C IQG1Q12280 1495 aa2.7□□□□□ -1.98
MSH3YCR092C SPP41P38904 1435 aa2.7□□□□□ -1.98
MSH3YCR092C TY3B-GQ99315 1547 aa2.7□□□□□ -1.98
MSH3YCR092C TSC11P40061 1430 aa2.7□□□□□ -1.98
MSH3YCR092C YTA7P40340 1379 aa2.69□□□□□ -1.98
MSH3YCR092C DRS2P39524 1355 aa2.69□□□□□ -1.98
MSH3YCR092C TFG1P41895 735 aaPredicted RBP2.69□□□□□ -1.98
MSH3YCR092C SKI3P17883 1432 aaKnown RBP2.69□□□□□ -1.98
MSH3YCR092C CAT8P39113 1433 aa2.67□□□□□ -1.98
MSH3YCR092C ULS1Q08562 1619 aa2.67□□□□□ -1.98
MSH3YCR092C TGL3P40308 642 aa2.67□□□□□ -1.98
MSH3YCR092C WSC3Q12215 556 aa2.67□□□□□ -1.98
MSH3YCR092C STH1P32597 1359 aa2.67□□□□□ -1.98
MSH3YCR092C BCH2P36122 765 aa2.66□□□□□ -1.98
MSH3YCR092C DNF3Q12674 1656 aa2.66□□□□□ -1.98
MSH3YCR092C PDR15Q04182 1529 aaKnown RBP2.66□□□□□ -1.98
MSH3YCR092C MMS1Q06211 1407 aa2.65□□□□□ -1.99
MSH3YCR092C EDE1P34216 1381 aa2.65□□□□□ -1.99
MSH3YCR092C ARO1P08566 1588 aaKnown RBP2.63□□□□□ -1.99
MSH3YCR092C VMR1P38735 1592 aa2.63□□□□□ -1.99
MSH3YCR092C YOR238WQ08634 303 aa2.61□□□□□ -1.99
MSH3YCR092C OXP1P28273 1286 aa2.6□□□□□ -1.99
MSH3YCR092C PDR5P33302 1511 aaKnown RBP2.6□□□□□ -1.99
MSH3YCR092C SEC7P11075 2009 aaKnown RBP2.6□□□□□ -1.99
MSH3YCR092C SPP1Q03012 353 aa2.59□□□□□ -1.99
MSH3YCR092C EPS1P40557 701 aa2.58□□□□□ -2
MSH3YCR092C BDF1P35817 686 aa2.58□□□□□ -2
MSH3YCR092C YBT1P32386 1661 aa2.58□□□□□ -2
MSH3YCR092C CFT1Q06632 1357 aaKnown RBP2.58□□□□□ -2
MSH3YCR092C NUP188P52593 1655 aaKnown RBP2.58□□□□□ -2
MSH3YCR092C RSM7P47150 247 aa2.57□□□□□ -2
MSH3YCR092C TAF7Q05021 590 aa2.55□□□□□ -2
MSH3YCR092C MST1P07236 462 aa2.55□□□□□ -2
MSH3YCR092C MET10P39692 1035 aa2.55□□□□□ -2
MSH3YCR092C YAP5P40574 245 aa2.55□□□□□ -2
MSH3YCR092C PEX29Q03370 554 aa2.54□□□□□ -2
MSH3YCR092C PIB1Q06651 286 aa2.54□□□□□ -2
MSH3YCR092C IML1P47170 1584 aa2.54□□□□□ -2
MSH3YCR092C NSR1P27476 414 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
MSH3YCR092C ITT1Q04638 464 aa2.53□□□□□ -2
MSH3YCR092C URN1Q06525 465 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms