RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C SER1P33330 395 aaKnown RBP3.56□□□□□ -1.84
RIF1YBR275C RTF1P53064 558 aa3.56□□□□□ -1.84
RIF1YBR275C BRE1Q07457 700 aaKnown RBP3.56□□□□□ -1.84
RIF1YBR275C DOS2P54858 310 aa3.55□□□□□ -1.84
RIF1YBR275C RNT1Q02555 471 aa3.55□□□□□ -1.84
RIF1YBR275C RRP8P38961 392 aaKnown RBP3.55□□□□□ -1.84
RIF1YBR275C YAF9P53930 226 aa3.55□□□□□ -1.84
RIF1YBR275C ENV9Q08651 330 aa3.54□□□□□ -1.84
RIF1YBR275C PWP2P25635 923 aaKnown RBP3.54□□□□□ -1.84
RIF1YBR275C ECM16Q04217 1267 aaKnown RBP3.54□□□□□ -1.84
RIF1YBR275C YOL036WQ08206 761 aa3.54□□□□□ -1.84
RIF1YBR275C TOP1P04786 769 aa3.54□□□□□ -1.84
RIF1YBR275C PUP2P32379 260 aa3.54□□□□□ -1.84
RIF1YBR275C DSF2P38213 736 aa3.54□□□□□ -1.84
RIF1YBR275C EIS1Q05050 843 aaKnown RBP3.54□□□□□ -1.84
RIF1YBR275C KAR2P16474 682 aaKnown RBP3.53□□□□□ -1.84
RIF1YBR275C RPN8Q08723 338 aaKnown RBP3.53□□□□□ -1.84
RIF1YBR275C RIM101P33400 625 aa3.53□□□□□ -1.84
RIF1YBR275C MSB4Q12317 492 aa3.53□□□□□ -1.84
RIF1YBR275C DID4P36108 232 aa3.53□□□□□ -1.84
RIF1YBR275C RAD26P40352 1085 aa3.53□□□□□ -1.84
RIF1YBR275C PSH1Q12161 406 aa3.53□□□□□ -1.84
RIF1YBR275C TPM1P17536 199 aaKnown RBP3.53□□□□□ -1.85
RIF1YBR275C ATG13Q06628 738 aa3.53□□□□□ -1.85
RIF1YBR275C TFC8Q12308 588 aa3.52□□□□□ -1.85
RIF1YBR275C BNR1P40450 1375 aa3.52□□□□□ -1.85
RIF1YBR275C CHZ1P40019 153 aaPredicted RBP3.52□□□□□ -1.85
RIF1YBR275C HXT15P54854 567 aa3.52□□□□□ -1.85
RIF1YBR275C PPX1P38698 397 aa3.51□□□□□ -1.85
RIF1YBR275C MCM5P29496 775 aaKnown RBP3.51□□□□□ -1.85
RIF1YBR275C STS1P38637 319 aa3.51□□□□□ -1.85
RIF1YBR275C MEC3Q02574 474 aa3.51□□□□□ -1.85
RIF1YBR275C NMD3P38861 518 aaKnown RBP3.51□□□□□ -1.85
RIF1YBR275C TAF8Q03750 510 aa3.51□□□□□ -1.85
RIF1YBR275C SSA2P10592 639 aaKnown RBP3.51□□□□□ -1.85
RIF1YBR275C MNR2P35724 969 aa3.51□□□□□ -1.85
RIF1YBR275C PUS4P48567 403 aaKnown RBP3.5□□□□□ -1.85
RIF1YBR275C SEC3P33332 1336 aaKnown RBP3.5□□□□□ -1.85
RIF1YBR275C YJL049WP47048 450 aa3.5□□□□□ -1.85
RIF1YBR275C YDL129WQ07555 291 aa3.5□□□□□ -1.85
RIF1YBR275C SDH5Q08230 162 aa3.5□□□□□ -1.85
RIF1YBR275C BUD21Q08492 214 aaPredicted RBP3.5□□□□□ -1.85
RIF1YBR275C SLI15P38283 698 aa3.5□□□□□ -1.85
RIF1YBR275C PSR2Q07949 397 aa3.5□□□□□ -1.85
RIF1YBR275C YJU2P28320 278 aaPredicted RBP3.5□□□□□ -1.85
RIF1YBR275C RPN11P43588 306 aaKnown RBP3.49□□□□□ -1.85
RIF1YBR275C YMR196WQ04336 1088 aa3.49□□□□□ -1.85
RIF1YBR275C HXT13P39924 564 aa3.49□□□□□ -1.85
RIF1YBR275C MET10P39692 1035 aa3.49□□□□□ -1.85
RIF1YBR275C SPR3P41901 512 aa3.49□□□□□ -1.85
RIF1YBR275C MAK16P10962 306 aaPredicted RBP3.48□□□□□ -1.85
RIF1YBR275C NAS2P40555 220 aa3.48□□□□□ -1.85
RIF1YBR275C SIZ1Q04195 904 aa3.48□□□□□ -1.85
RIF1YBR275C YBR238CP38330 731 aaKnown RBP3.48□□□□□ -1.85
RIF1YBR275C FET4P40988 552 aa3.48□□□□□ -1.85
RIF1YBR275C IOC3P43596 787 aa3.48□□□□□ -1.85
RIF1YBR275C POL30P15873 258 aaKnown RBP3.48□□□□□ -1.85
RIF1YBR275C VPS53P47061 822 aa3.48□□□□□ -1.85
RIF1YBR275C SWI6P09959 803 aa3.47□□□□□ -1.85
RIF1YBR275C RIA1P53893 1110 aa3.47□□□□□ -1.85
RIF1YBR275C HXT17P53631 564 aa3.47□□□□□ -1.85
RIF1YBR275C JIP4Q03361 876 aa3.47□□□□□ -1.85
RIF1YBR275C ALD4P46367 519 aaKnown RBP3.47□□□□□ -1.85
RIF1YBR275C ISW2Q08773 1120 aa3.47□□□□□ -1.85
RIF1YBR275C SPT7P35177 1332 aa3.47□□□□□ -1.85
RIF1YBR275C SMY2P32909 740 aaKnown RBP3.46□□□□□ -1.85
RIF1YBR275C PUS6P53294 404 aa3.46□□□□□ -1.85
RIF1YBR275C YNL050CP53952 270 aa3.46□□□□□ -1.86
RIF1YBR275C MAK21Q12176 1025 aaKnown RBP3.46□□□□□ -1.86
RIF1YBR275C SEC20P28791 383 aa3.46□□□□□ -1.86
RIF1YBR275C FAA3P39002 694 aa3.46□□□□□ -1.86
RIF1YBR275C RPN3P40016 523 aaKnown RBP3.46□□□□□ -1.86
RIF1YBR275C NST1P53935 1240 aa3.46□□□□□ -1.86
RIF1YBR275C SES1P07284 462 aaKnown RBP3.46□□□□□ -1.86
RIF1YBR275C EAP1P36041 632 aaKnown RBP3.45□□□□□ -1.86
RIF1YBR275C NOP2P40991 618 aaKnown RBP3.45□□□□□ -1.86
RIF1YBR275C SQS1P53866 767 aaKnown RBP3.45□□□□□ -1.86
RIF1YBR275C CEX1Q12453 761 aa3.45□□□□□ -1.86
RIF1YBR275C MCD4P36051 919 aa3.45□□□□□ -1.86
RIF1YBR275C ENT3P47160 408 aa3.45□□□□□ -1.86
RIF1YBR275C ALT2P52892 507 aa3.45□□□□□ -1.86
RIF1YBR275C ACE2P21192 770 aa3.45□□□□□ -1.86
RIF1YBR275C YEL1P34225 687 aa3.45□□□□□ -1.86
RIF1YBR275C ESF1Q06344 628 aaKnown RBP3.45□□□□□ -1.86
RIF1YBR275C RRI2Q12348 645 aa3.44□□□□□ -1.86
RIF1YBR275C TAF2P23255 1407 aa3.44□□□□□ -1.86
RIF1YBR275C RRP15Q06511 250 aaPredicted RBP3.44□□□□□ -1.86
RIF1YBR275C GYP5Q12344 894 aa3.44□□□□□ -1.86
RIF1YBR275C SAP185P40856 1058 aa3.44□□□□□ -1.86
RIF1YBR275C MRK1P50873 501 aa3.44□□□□□ -1.86
RIF1YBR275C HSC82P15108 705 aaKnown RBP3.43□□□□□ -1.86
RIF1YBR275C SSA4P22202 642 aaKnown RBP3.43□□□□□ -1.86
RIF1YBR275C YKR018CP36114 725 aa3.43□□□□□ -1.86
RIF1YBR275C STE11P23561 717 aa3.43□□□□□ -1.86
RIF1YBR275C MSH6Q03834 1242 aa3.43□□□□□ -1.86
RIF1YBR275C RKM4Q12504 494 aa3.43□□□□□ -1.86
RIF1YBR275C ORC1P54784 914 aaPredicted RBP3.43□□□□□ -1.86
RIF1YBR275C YPR084WQ06821 456 aa3.43□□□□□ -1.86
RIF1YBR275C HIF1Q12373 385 aa3.43□□□□□ -1.86
RIF1YBR275C FAR10Q06001 478 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms