RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeastyeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSM3YBR272C TY1B-JR1P47098 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-ML2Q03434 1755 aaKnown RBP9.19□□□□□ -0.94
HSM3YBR272C TY1B-ER1Q03612 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-ML1Q04711 1755 aaKnown RBP9.19□□□□□ -0.94
HSM3YBR272C TY1B-GR2Q12269 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-OLQ12273 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-PLQ12414 1755 aaKnown RBP9.19□□□□□ -0.94
HSM3YBR272C TY2B-BQ12491 1770 aa9.18□□□□□ -0.94
HSM3YBR272C NAP1P25293 417 aaKnown RBP9.15□□□□□ -0.94
HSM3YBR272C KRI1P42846 591 aaKnown RBP9.15□□□□□ -0.94
HSM3YBR272C VPS15P22219 1454 aa9.14□□□□□ -0.95
HSM3YBR272C NUP159P40477 1460 aa9.14□□□□□ -0.95
HSM3YBR272C YRF1-1P0CX20 1796 aa9.14□□□□□ -0.95
HSM3YBR272C YRF1-5P0CX21 1796 aa9.14□□□□□ -0.95
HSM3YBR272C YRF1-8P0CX22 1796 aa9.14□□□□□ -0.95
HSM3YBR272C TY1B-DR3Q99231 1755 aa9.13□□□□□ -0.95
HSM3YBR272C RPL17AP05740 184 aaKnown RBP9.12□□□□□ -0.95
HSM3YBR272C RPL17BP46990 184 aaKnown RBP9.12□□□□□ -0.95
HSM3YBR272C IOC4Q04213 475 aa9.07□□□□□ -0.96
HSM3YBR272C DNF2Q12675 1612 aa9.07□□□□□ -0.96
HSM3YBR272C SPP41P38904 1435 aa9.05□□□□□ -0.96
HSM3YBR272C YPR148CQ06523 435 aa9.05□□□□□ -0.96
HSM3YBR272C NSR1P27476 414 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
HSM3YBR272C NTE1Q04958 1679 aa9.02□□□□□ -0.97
HSM3YBR272C SMC4Q12267 1418 aa9□□□□□ -0.97
HSM3YBR272C TY1B-JR2P47100 1755 aaKnown RBP8.99□□□□□ -0.97
HSM3YBR272C TY1B-ER2Q03619 1755 aa8.99□□□□□ -0.97
HSM3YBR272C TY1B-MR1Q04214 1755 aa8.99□□□□□ -0.97
HSM3YBR272C TY1B-MR2Q04670 1755 aaKnown RBP8.99□□□□□ -0.97
HSM3YBR272C TY1B-LR1Q12088 1755 aaKnown RBP8.99□□□□□ -0.97
HSM3YBR272C TY1B-NL1Q12112 1755 aa8.99□□□□□ -0.97
HSM3YBR272C TY1B-GR1Q12141 1755 aa8.99□□□□□ -0.97
HSM3YBR272C TY1B-BLQ12490 1755 aa8.99□□□□□ -0.97
HSM3YBR272C POL1P13382 1468 aa8.99□□□□□ -0.97
HSM3YBR272C MNN4P36044 1178 aa8.98□□□□□ -0.97
HSM3YBR272C TSC11P40061 1430 aa8.97□□□□□ -0.97
HSM3YBR272C CWC22P53333 577 aaKnown RBP8.97□□□□□ -0.97
HSM3YBR272C YOR1P53049 1477 aa8.96□□□□□ -0.97
HSM3YBR272C NUP170P38181 1502 aa8.96□□□□□ -0.97
HSM3YBR272C RPO21P04050 1733 aaKnown RBP8.96□□□□□ -0.97
HSM3YBR272C VTH1P40438 1549 aa8.95□□□□□ -0.98
HSM3YBR272C VTH2P40890 1549 aa8.95□□□□□ -0.98
HSM3YBR272C AIM44Q99299 758 aa8.95□□□□□ -0.98
HSM3YBR272C REB1P21538 810 aa8.93□□□□□ -0.98
HSM3YBR272C TSR3Q12094 313 aaKnown RBP8.93□□□□□ -0.98
HSM3YBR272C YOR093CQ12275 1648 aa8.92□□□□□ -0.98
HSM3YBR272C STU1P38198 1513 aa8.92□□□□□ -0.98
HSM3YBR272C SNT2P53127 1403 aa8.89□□□□□ -0.99
HSM3YBR272C LEO1P38439 464 aa8.89□□□□□ -0.99
HSM3YBR272C MYO4P32492 1471 aa8.87□□□□□ -0.99
HSM3YBR272C SPO14P36126 1683 aa8.86□□□□□ -0.99
HSM3YBR272C BUD31P25337 157 aaPredicted RBP8.86□□□□□ -0.99
HSM3YBR272C DEF1P35732 738 aaKnown RBP8.86□□□□□ -0.99
HSM3YBR272C MET10P39692 1035 aa8.86□□□□□ -0.99
HSM3YBR272C SPT21P35209 758 aa8.85□□□□□ -0.99
HSM3YBR272C ULS1Q08562 1619 aa8.84□□□□□ -0.99
HSM3YBR272C DOP1Q03921 1698 aa8.83□□□□□ -1
HSM3YBR272C SNQ2P32568 1501 aaKnown RBP8.8□□□□□ -1
HSM3YBR272C TCB2P48231 1178 aa8.8□□□□□ -1
HSM3YBR272C RIM101P33400 625 aa8.79□□□□□ -1
HSM3YBR272C TRM3Q07527 1436 aa8.77□□□□□ -1.01
HSM3YBR272C YGL015CP33199 130 aa8.76□□□□□ -1.01
HSM3YBR272C SNU71P53207 620 aaKnown RBP8.75□□□□□ -1.01
HSM3YBR272C PDR10P51533 1564 aa8.74□□□□□ -1.01
HSM3YBR272C RTT106P40161 455 aa8.74□□□□□ -1.01
HSM3YBR272C ENV11P53246 860 aa8.74□□□□□ -1.01
HSM3YBR272C PTP3P40048 928 aa8.73□□□□□ -1.01
HSM3YBR272C IQG1Q12280 1495 aa8.73□□□□□ -1.01
HSM3YBR272C PDR12Q02785 1511 aa8.73□□□□□ -1.01
HSM3YBR272C NUG1P40010 520 aaKnown RBP8.72□□□□□ -1.01
HSM3YBR272C PSH1Q12161 406 aa8.72□□□□□ -1.01
HSM3YBR272C STH1P32597 1359 aa8.72□□□□□ -1.01
HSM3YBR272C TOP1P04786 769 aa8.71□□□□□ -1.01
HSM3YBR272C RLF2Q12495 606 aa8.71□□□□□ -1.01
HSM3YBR272C NOP53Q12080 455 aaKnown RBP8.71□□□□□ -1.02
HSM3YBR272C NUP157P40064 1391 aaKnown RBP8.68□□□□□ -1.02
HSM3YBR272C YTA7P40340 1379 aa8.68□□□□□ -1.02
HSM3YBR272C GDB1Q06625 1536 aa8.68□□□□□ -1.02
HSM3YBR272C PDR15Q04182 1529 aaKnown RBP8.66□□□□□ -1.02
HSM3YBR272C DMA1P38823 416 aa8.66□□□□□ -1.02
HSM3YBR272C BUD3P25558 1636 aa8.63□□□□□ -1.03
HSM3YBR272C RLP24Q07915 199 aaKnown RBP8.63□□□□□ -1.03
HSM3YBR272C DNF3Q12674 1656 aa8.62□□□□□ -1.03
HSM3YBR272C QCR6P00127 147 aa8.62□□□□□ -1.03
HSM3YBR272C HSP82P02829 709 aaKnown RBP8.62□□□□□ -1.03
HSM3YBR272C MDG1P53885 366 aa8.62□□□□□ -1.03
HSM3YBR272C PLP2Q12017 286 aa8.62□□□□□ -1.03
HSM3YBR272C SPT7P35177 1332 aa8.61□□□□□ -1.03
HSM3YBR272C IFH1P39520 1085 aa8.61□□□□□ -1.03
HSM3YBR272C ARO1P08566 1588 aaKnown RBP8.6□□□□□ -1.03
HSM3YBR272C SPT2P06843 333 aaPredicted RBP8.6□□□□□ -1.03
HSM3YBR272C MRPL32P25348 183 aa8.59□□□□□ -1.03
HSM3YBR272C MLP2P40457 1679 aa8.58□□□□□ -1.04
HSM3YBR272C CHC1P22137 1653 aaKnown RBP8.57□□□□□ -1.04
HSM3YBR272C SSP1P38871 571 aa8.56□□□□□ -1.04
HSM3YBR272C OXP1P28273 1286 aa8.55□□□□□ -1.04
HSM3YBR272C FPR3P38911 411 aaKnown RBP8.55□□□□□ -1.04
HSM3YBR272C ENP1P38333 483 aaKnown RBP8.54□□□□□ -1.04
HSM3YBR272C YAP3P38749 330 aa8.54□□□□□ -1.04
HSM3YBR272C RIX1P38883 763 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms