RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C BDF1P35817 686 aa3.03□□□□□ -1.92
YAR009CYAR009C SLX5P32828 619 aaKnown RBP3.02□□□□□ -1.93
YAR009CYAR009C PSD2P53037 1138 aaKnown RBP3.02□□□□□ -1.93
YAR009CYAR009C ESC1Q03661 1658 aaKnown RBP3.02□□□□□ -1.93
YAR009CYAR009C TY1B-JR2P47100 1755 aaKnown RBP3.02□□□□□ -1.93
YAR009CYAR009C TY1B-ER2Q03619 1755 aa3.02□□□□□ -1.93
YAR009CYAR009C TY1B-MR1Q04214 1755 aa3.02□□□□□ -1.93
YAR009CYAR009C TY1B-MR2Q04670 1755 aaKnown RBP3.02□□□□□ -1.93
YAR009CYAR009C TY1B-LR1Q12088 1755 aaKnown RBP3.02□□□□□ -1.93
YAR009CYAR009C TY1B-NL1Q12112 1755 aa3.02□□□□□ -1.93
YAR009CYAR009C TY1B-GR1Q12141 1755 aa3.02□□□□□ -1.93
YAR009CYAR009C TY1B-BLQ12490 1755 aa3.02□□□□□ -1.93
YAR009CYAR009C BUD31P25337 157 aaPredicted RBP3.01□□□□□ -1.93
YAR009CYAR009C XRN1P22147 1528 aaKnown RBP3.01□□□□□ -1.93
YAR009CYAR009C RQC2Q12532 1038 aaKnown RBP3.01□□□□□ -1.93
YAR009CYAR009C CST9Q06032 482 aa3□□□□□ -1.93
YAR009CYAR009C YCF1P39109 1515 aaKnown RBP3□□□□□ -1.93
YAR009CYAR009C BPT1P14772 1559 aa3□□□□□ -1.93
YAR009CYAR009C YRF1-1P0CX20 1796 aa2.99□□□□□ -1.93
YAR009CYAR009C YRF1-5P0CX21 1796 aa2.99□□□□□ -1.93
YAR009CYAR009C YRF1-8P0CX22 1796 aa2.99□□□□□ -1.93
YAR009CYAR009C RPO21P04050 1733 aaKnown RBP2.99□□□□□ -1.93
YAR009CYAR009C TIF4632P39936 914 aaKnown RBP2.99□□□□□ -1.93
YAR009CYAR009C SGS1P35187 1447 aa2.98□□□□□ -1.93
YAR009CYAR009C DNF1P32660 1571 aa2.98□□□□□ -1.93
YAR009CYAR009C RKR1Q04781 1562 aa2.98□□□□□ -1.93
YAR009CYAR009C CDC25P04821 1589 aa2.98□□□□□ -1.93
YAR009CYAR009C NTE1Q04958 1679 aa2.98□□□□□ -1.93
YAR009CYAR009C MET5P47169 1442 aa2.97□□□□□ -1.93
YAR009CYAR009C YPK9Q12697 1472 aa2.97□□□□□ -1.93
YAR009CYAR009C MRM1P25270 412 aa2.97□□□□□ -1.93
YAR009CYAR009C HAP1P0CE41 1502 aa2.96□□□□□ -1.93
YAR009CYAR009C RPO31P04051 1460 aa2.95□□□□□ -1.94
YAR009CYAR009C TGL3P40308 642 aa2.95□□□□□ -1.94
YAR009CYAR009C SPO14P36126 1683 aa2.94□□□□□ -1.94
YAR009CYAR009C RTG3P38165 486 aa2.93□□□□□ -1.94
YAR009CYAR009C DMA1P38823 416 aa2.93□□□□□ -1.94
YAR009CYAR009C DNF2Q12675 1612 aa2.93□□□□□ -1.94
YAR009CYAR009C SCC2Q04002 1493 aa2.92□□□□□ -1.94
YAR009CYAR009C DOP1Q03921 1698 aa2.9□□□□□ -1.94
YAR009CYAR009C RCR1P38212 213 aa2.9□□□□□ -1.94
YAR009CYAR009C NSR1P27476 414 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
YAR009CYAR009C YAP5P40574 245 aa2.89□□□□□ -1.95
YAR009CYAR009C MLP2P40457 1679 aa2.89□□□□□ -1.95
YAR009CYAR009C LTE1P07866 1435 aa2.89□□□□□ -1.95
YAR009CYAR009C RAM2P29703 316 aa2.88□□□□□ -1.95
YAR009CYAR009C VPS29P38759 282 aa2.88□□□□□ -1.95
YAR009CYAR009C YMR1P47147 688 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
YAR009CYAR009C CHC1P22137 1653 aaKnown RBP2.88□□□□□ -1.95
YAR009CYAR009C YOR093CQ12275 1648 aa2.88□□□□□ -1.95
YAR009CYAR009C ECM5Q03214 1411 aa2.88□□□□□ -1.95
YAR009CYAR009C YOR238WQ08634 303 aa2.87□□□□□ -1.95
YAR009CYAR009C DBP1P24784 617 aaKnown RBP2.86□□□□□ -1.95
YAR009CYAR009C MAK11P20484 414 aaKnown RBP2.86□□□□□ -1.95
YAR009CYAR009C YFR006WP43590 535 aa2.85□□□□□ -1.95
YAR009CYAR009C PIB1Q06651 286 aa2.85□□□□□ -1.95
YAR009CYAR009C STS1P38637 319 aa2.85□□□□□ -1.95
YAR009CYAR009C MST1P07236 462 aa2.84□□□□□ -1.95
YAR009CYAR009C PDR12Q02785 1511 aa2.84□□□□□ -1.96
YAR009CYAR009C SET1P38827 1080 aaKnown RBP2.82□□□□□ -1.96
YAR009CYAR009C GTT3P39996 337 aa2.82□□□□□ -1.96
YAR009CYAR009C COQ8P27697 501 aa2.81□□□□□ -1.96
YAR009CYAR009C VMA1P17255 1071 aaKnown RBP2.81□□□□□ -1.96
YAR009CYAR009C PAN1P32521 1480 aa2.81□□□□□ -1.96
YAR009CYAR009C SNT2P53127 1403 aa2.8□□□□□ -1.96
YAR009CYAR009C CHD1P32657 1468 aa2.8□□□□□ -1.96
YAR009CYAR009C UBP9P39967 754 aa2.8□□□□□ -1.96
YAR009CYAR009C TAF2P23255 1407 aa2.79□□□□□ -1.96
YAR009CYAR009C IFH1P39520 1085 aa2.79□□□□□ -1.96
YAR009CYAR009C NOP53Q12080 455 aaKnown RBP2.79□□□□□ -1.96
YAR009CYAR009C POL1P13382 1468 aa2.79□□□□□ -1.96
YAR009CYAR009C EDS1P38073 919 aa2.79□□□□□ -1.96
YAR009CYAR009C SSN2P38931 1420 aa2.78□□□□□ -1.96
YAR009CYAR009C SAS10Q12136 610 aaPredicted RBP2.78□□□□□ -1.96
YAR009CYAR009C PDR10P51533 1564 aa2.78□□□□□ -1.96
YAR009CYAR009C TY3B-GQ99315 1547 aa2.78□□□□□ -1.97
YAR009CYAR009C PTC3P34221 468 aaKnown RBP2.77□□□□□ -1.97
YAR009CYAR009C WSC3Q12215 556 aa2.77□□□□□ -1.97
YAR009CYAR009C SAM3Q08986 587 aa2.77□□□□□ -1.97
YAR009CYAR009C TOP2P06786 1428 aaKnown RBP2.77□□□□□ -1.97
YAR009CYAR009C SMC4Q12267 1418 aa2.77□□□□□ -1.97
YAR009CYAR009C ULS1Q08562 1619 aa2.77□□□□□ -1.97
YAR009CYAR009C VPS15P22219 1454 aa2.77□□□□□ -1.97
YAR009CYAR009C GRE2Q12068 342 aaKnown RBP2.76□□□□□ -1.97
YAR009CYAR009C YBL029C-AQ3E756 94 aa2.76□□□□□ -1.97
YAR009CYAR009C PDR15Q04182 1529 aaKnown RBP2.76□□□□□ -1.97
YAR009CYAR009C SET4P42948 560 aa2.76□□□□□ -1.97
YAR009CYAR009C ATH1P48016 1211 aa2.76□□□□□ -1.97
YAR009CYAR009C GYP5Q12344 894 aa2.76□□□□□ -1.97
YAR009CYAR009C TRM3Q07527 1436 aa2.76□□□□□ -1.97
YAR009CYAR009C YOR1P53049 1477 aa2.76□□□□□ -1.97
YAR009CYAR009C DNF3Q12674 1656 aa2.76□□□□□ -1.97
YAR009CYAR009C VPS70P47161 811 aa2.76□□□□□ -1.97
YAR009CYAR009C YOL036WQ08206 761 aa2.76□□□□□ -1.97
YAR009CYAR009C GDB1Q06625 1536 aa2.76□□□□□ -1.97
YAR009CYAR009C ARO1P08566 1588 aaKnown RBP2.75□□□□□ -1.97
YAR009CYAR009C YPR148CQ06523 435 aa2.75□□□□□ -1.97
YAR009CYAR009C MSB4Q12317 492 aa2.75□□□□□ -1.97
YAR009CYAR009C VNX1P42839 908 aa2.75□□□□□ -1.97
YAR009CYAR009C SNQ2P32568 1501 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms