RNA–Protein interactions for RNA: ENST00000585352.5

ZNF559-203, Transcript of zinc finger protein 559, humanhuman

TSL 1 (best) BASIC

Gene ZNF559, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-203ENST00000585352 NESP48681 1621 aa14.88□□□□□ -0.03
ZNF559-203ENST00000585352 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
ZNF559-203ENST00000585352 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
ZNF559-203ENST00000585352 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
ZNF559-203ENST00000585352 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
ZNF559-203ENST00000585352 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
ZNF559-203ENST00000585352 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
ZNF559-203ENST00000585352 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
ZNF559-203ENST00000585352 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
ZNF559-203ENST00000585352 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
ZNF559-203ENST00000585352 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
ZNF559-203ENST00000585352 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
ZNF559-203ENST00000585352 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
ZNF559-203ENST00000585352 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
ZNF559-203ENST00000585352 CUX1P39880 1505 aa14.75□□□□□ -0.05
ZNF559-203ENST00000585352 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
ZNF559-203ENST00000585352 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
ZNF559-203ENST00000585352 WDR62O43379 1518 aa14.66□□□□□ -0.06
ZNF559-203ENST00000585352 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
ZNF559-203ENST00000585352 EEA1Q15075 1411 aa14.66□□□□□ -0.06
ZNF559-203ENST00000585352 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
ZNF559-203ENST00000585352 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
ZNF559-203ENST00000585352 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
ZNF559-203ENST00000585352 POLA1P09884 1462 aaPredicted RBP14.6□□□□□ -0.07
ZNF559-203ENST00000585352 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
ZNF559-203ENST00000585352 IFT140Q96RY7 1462 aa14.54□□□□□ -0.08
ZNF559-203ENST00000585352 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
ZNF559-203ENST00000585352 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
ZNF559-203ENST00000585352 CUX2O14529 1486 aa14.53□□□□□ -0.08
ZNF559-203ENST00000585352 SOGA1O94964 1423 aa14.53□□□□□ -0.08
ZNF559-203ENST00000585352 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
ZNF559-203ENST00000585352 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
ZNF559-203ENST00000585352 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
ZNF559-203ENST00000585352 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
ZNF559-203ENST00000585352 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
ZNF559-203ENST00000585352 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
ZNF559-203ENST00000585352 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
ZNF559-203ENST00000585352 HAX1O00165 279 aa14.44□□□□□ -0.1
ZNF559-203ENST00000585352 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
ZNF559-203ENST00000585352 CUL7Q14999 1698 aa14.44□□□□□ -0.1
ZNF559-203ENST00000585352 KIF21BO75037 1637 aa14.44□□□□□ -0.1
ZNF559-203ENST00000585352 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
ZNF559-203ENST00000585352 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
ZNF559-203ENST00000585352 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
ZNF559-203ENST00000585352 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
ZNF559-203ENST00000585352 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
ZNF559-203ENST00000585352 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
ZNF559-203ENST00000585352 GRIN2BQ13224 1484 aa14.37□□□□□ -0.11
ZNF559-203ENST00000585352 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
ZNF559-203ENST00000585352 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
ZNF559-203ENST00000585352 ZNF608Q9ULD9 1512 aaPredicted RBP14.32□□□□□ -0.12
ZNF559-203ENST00000585352 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
ZNF559-203ENST00000585352 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
ZNF559-203ENST00000585352 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
ZNF559-203ENST00000585352 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
ZNF559-203ENST00000585352 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
ZNF559-203ENST00000585352 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.12
ZNF559-203ENST00000585352 IGF1RP08069 1367 aa14.29□□□□□ -0.12
ZNF559-203ENST00000585352 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
ZNF559-203ENST00000585352 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
ZNF559-203ENST00000585352 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
ZNF559-203ENST00000585352 SNAPC4Q5SXM2 1469 aa14.27□□□□□ -0.12
ZNF559-203ENST00000585352 UBTFP17480 764 aaKnown RBP14.26□□□□□ -0.13
ZNF559-203ENST00000585352 EVX2Q03828 476 aa14.26□□□□□ -0.13
ZNF559-203ENST00000585352 PROM2Q8N271 834 aa14.23□□□□□ -0.13
ZNF559-203ENST00000585352 CTTNBP2Q8WZ74 1663 aa14.23□□□□□ -0.13
ZNF559-203ENST00000585352 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
ZNF559-203ENST00000585352 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
ZNF559-203ENST00000585352 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
ZNF559-203ENST00000585352 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
ZNF559-203ENST00000585352 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
ZNF559-203ENST00000585352 CEP162Q5TB80 1403 aa14.16□□□□□ -0.14
ZNF559-203ENST00000585352 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
ZNF559-203ENST00000585352 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
ZNF559-203ENST00000585352 CLIP1P30622 1438 aa14.12□□□□□ -0.15
ZNF559-203ENST00000585352 IQGAP2Q13576 1575 aa14.12□□□□□ -0.15
ZNF559-203ENST00000585352 CHD1O14646 1710 aa14.12□□□□□ -0.15
ZNF559-203ENST00000585352 EFCAB5A4FU69 1503 aa14.11□□□□□ -0.15
ZNF559-203ENST00000585352 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
ZNF559-203ENST00000585352 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
ZNF559-203ENST00000585352 NUP160Q12769 1436 aa14.05□□□□□ -0.16
ZNF559-203ENST00000585352 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
ZNF559-203ENST00000585352 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
ZNF559-203ENST00000585352 SAMD9Q5K651 1589 aa14□□□□□ -0.17
ZNF559-203ENST00000585352 UGGT2Q9NYU1 1516 aa14□□□□□ -0.17
ZNF559-203ENST00000585352 GABBR2O75899 941 aa13.99□□□□□ -0.17
ZNF559-203ENST00000585352 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
ZNF559-203ENST00000585352 ARHGAP35Q9NRY4 1499 aa13.97□□□□□ -0.17
ZNF559-203ENST00000585352 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
ZNF559-203ENST00000585352 CLCN6P51797 869 aa13.96□□□□□ -0.17
ZNF559-203ENST00000585352 KIAA0556O60303 1618 aa13.96□□□□□ -0.17
ZNF559-203ENST00000585352 ARAP1Q96P48 1450 aa13.95□□□□□ -0.18
ZNF559-203ENST00000585352 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
ZNF559-203ENST00000585352 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
ZNF559-203ENST00000585352 CLASP1Q7Z460 1538 aa13.94□□□□□ -0.18
ZNF559-203ENST00000585352 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
ZNF559-203ENST00000585352 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
ZNF559-203ENST00000585352 SHROOM2Q13796 1616 aa13.9□□□□□ -0.18
ZNF559-203ENST00000585352 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
ZNF559-203ENST00000585352 FYCO1Q9BQS8 1478 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms