RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
CAPN3-210ENST00000561817 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
CAPN3-210ENST00000561817 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
CAPN3-210ENST00000561817 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
CAPN3-210ENST00000561817 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-210ENST00000561817 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
CAPN3-210ENST00000561817 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN3-210ENST00000561817 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
CAPN3-210ENST00000561817 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
CAPN3-210ENST00000561817 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
CAPN3-210ENST00000561817 LOC105371045A0A1W2PR82 267 aa10.76□□□□□ -0.69
CAPN3-210ENST00000561817 SPDYE1Q8NFV5 336 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-210ENST00000561817 CUX1P39880 1505 aa10.74□□□□□ -0.69
CAPN3-210ENST00000561817 SOGA1O94964 1423 aa10.73□□□□□ -0.69
CAPN3-210ENST00000561817 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
CAPN3-210ENST00000561817 RUSC2Q8N2Y8 1516 aa10.71□□□□□ -0.69
CAPN3-210ENST00000561817 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.69
CAPN3-210ENST00000561817 EEA1Q15075 1411 aa10.7□□□□□ -0.7
CAPN3-210ENST00000561817 CEP164Q9UPV0 1460 aa10.69□□□□□ -0.7
CAPN3-210ENST00000561817 PDS5BQ9NTI5 1447 aa10.69□□□□□ -0.7
CAPN3-210ENST00000561817 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
CAPN3-210ENST00000561817 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
CAPN3-210ENST00000561817 HAX1O00165 279 aa10.65□□□□□ -0.7
CAPN3-210ENST00000561817 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-210ENST00000561817 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
CAPN3-210ENST00000561817 PRKAR2AP13861 404 aaKnown RBP10.62□□□□□ -0.71
CAPN3-210ENST00000561817 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
CAPN3-210ENST00000561817 WDR62O43379 1518 aa10.59□□□□□ -0.71
CAPN3-210ENST00000561817 TOPBP1Q92547 1522 aa10.59□□□□□ -0.71
CAPN3-210ENST00000561817 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
CAPN3-210ENST00000561817 URB2Q14146 1524 aaKnown RBP10.58□□□□□ -0.72
CAPN3-210ENST00000561817 KIF21BO75037 1637 aa10.58□□□□□ -0.72
CAPN3-210ENST00000561817 CUX2O14529 1486 aa10.57□□□□□ -0.72
CAPN3-210ENST00000561817 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
CAPN3-210ENST00000561817 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-210ENST00000561817 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
CAPN3-210ENST00000561817 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
CAPN3-210ENST00000561817 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
CAPN3-210ENST00000561817 KIF27Q86VH2 1401 aa10.54□□□□□ -0.72
CAPN3-210ENST00000561817 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.73
CAPN3-210ENST00000561817 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
CAPN3-210ENST00000561817 RAD54L2Q9Y4B4 1467 aa10.5□□□□□ -0.73
CAPN3-210ENST00000561817 RAPGEF2Q9Y4G8 1499 aa10.5□□□□□ -0.73
CAPN3-210ENST00000561817 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
CAPN3-210ENST00000561817 WDR97A6NE52 1622 aa10.5□□□□□ -0.73
CAPN3-210ENST00000561817 IGF1RP08069 1367 aa10.5□□□□□ -0.73
CAPN3-210ENST00000561817 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
CAPN3-210ENST00000561817 EVX2Q03828 476 aa10.47□□□□□ -0.73
CAPN3-210ENST00000561817 CEP162Q5TB80 1403 aa10.47□□□□□ -0.73
CAPN3-210ENST00000561817 TARBP1Q13395 1621 aaKnown RBP10.46□□□□□ -0.74
CAPN3-210ENST00000561817 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
CAPN3-210ENST00000561817 ABCA5Q8WWZ7 1642 aa10.44□□□□□ -0.74
CAPN3-210ENST00000561817 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-210ENST00000561817 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
CAPN3-210ENST00000561817 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
CAPN3-210ENST00000561817 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
CAPN3-210ENST00000561817 PBRM1Q86U86 1689 aa10.41□□□□□ -0.74
CAPN3-210ENST00000561817 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
CAPN3-210ENST00000561817 IFT140Q96RY7 1462 aa10.41□□□□□ -0.74
CAPN3-210ENST00000561817 CARMIL1Q5VZK9 1371 aa10.4□□□□□ -0.74
CAPN3-210ENST00000561817 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-210ENST00000561817 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
CAPN3-210ENST00000561817 CUL7Q14999 1698 aa10.38□□□□□ -0.75
CAPN3-210ENST00000561817 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
CAPN3-210ENST00000561817 CLIP1P30622 1438 aa10.37□□□□□ -0.75
CAPN3-210ENST00000561817 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-210ENST00000561817 CHD1O14646 1710 aa10.36□□□□□ -0.75
CAPN3-210ENST00000561817 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.76
CAPN3-210ENST00000561817 ARAP1Q96P48 1450 aa10.31□□□□□ -0.76
CAPN3-210ENST00000561817 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
CAPN3-210ENST00000561817 ARHGAP35Q9NRY4 1499 aa10.3□□□□□ -0.76
CAPN3-210ENST00000561817 ADAMTS12P58397 1594 aa10.29□□□□□ -0.76
CAPN3-210ENST00000561817 GRIN2BQ13224 1484 aa10.29□□□□□ -0.76
CAPN3-210ENST00000561817 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
CAPN3-210ENST00000561817 SNAPC4Q5SXM2 1469 aa10.28□□□□□ -0.76
CAPN3-210ENST00000561817 FHAD1B1AJZ9 1412 aa10.27□□□□□ -0.77
CAPN3-210ENST00000561817 GABBR2O75899 941 aa10.27□□□□□ -0.77
CAPN3-210ENST00000561817 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
CAPN3-210ENST00000561817 TRIM26Q12899 539 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-210ENST00000561817 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
CAPN3-210ENST00000561817 PCGF6Q9BYE7 350 aa10.24□□□□□ -0.77
CAPN3-210ENST00000561817 DAXXQ9UER7 740 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-210ENST00000561817 MAGI1Q96QZ7 1491 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-210ENST00000561817 EFCAB5A4FU69 1503 aa10.21□□□□□ -0.78
CAPN3-210ENST00000561817 RANGAP1P46060 587 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-210ENST00000561817 SAMD9Q5K651 1589 aa10.2□□□□□ -0.78
CAPN3-210ENST00000561817 PPARGC1BQ86YN6 1023 aaKnown RBP10.19□□□□□ -0.78
CAPN3-210ENST00000561817 CLCN6P51797 869 aa10.18□□□□□ -0.78
CAPN3-210ENST00000561817 PROM2Q8N271 834 aa10.18□□□□□ -0.78
CAPN3-210ENST00000561817 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
CAPN3-210ENST00000561817 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
CAPN3-210ENST00000561817 ZRANB1Q9UGI0 708 aa10.15□□□□□ -0.78
CAPN3-210ENST00000561817 MAP3K1Q13233 1512 aa10.15□□□□□ -0.78
CAPN3-210ENST00000561817 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.79
CAPN3-210ENST00000561817 IQGAP2Q13576 1575 aa10.14□□□□□ -0.79
CAPN3-210ENST00000561817 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
CAPN3-210ENST00000561817 UGGT2Q9NYU1 1516 aa10.14□□□□□ -0.79
CAPN3-210ENST00000561817 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAPN3-210ENST00000561817 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
CAPN3-210ENST00000561817 NUP160Q12769 1436 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms