RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
KCNQ3-203ENST00000519589 TOPBP1Q92547 1522 aa12.31□□□□□ -0.44
KCNQ3-203ENST00000519589 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
KCNQ3-203ENST00000519589 UBE2Q2Q8WVN8 375 aa12.25□□□□□ -0.45
KCNQ3-203ENST00000519589 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
KCNQ3-203ENST00000519589 FANCIQ9NVI1 1328 aa12.25□□□□□ -0.45
KCNQ3-203ENST00000519589 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
KCNQ3-203ENST00000519589 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
KCNQ3-203ENST00000519589 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
KCNQ3-203ENST00000519589 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
KCNQ3-203ENST00000519589 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
KCNQ3-203ENST00000519589 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
KCNQ3-203ENST00000519589 CUX1P39880 1505 aa12.17□□□□□ -0.46
KCNQ3-203ENST00000519589 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
KCNQ3-203ENST00000519589 THOC2Q8NI27 1593 aaKnown RBP12.17□□□□□ -0.46
KCNQ3-203ENST00000519589 GAPVD1Q14C86 1478 aa12.16□□□□□ -0.46
KCNQ3-203ENST00000519589 WDR62O43379 1518 aa12.14□□□□□ -0.47
KCNQ3-203ENST00000519589 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
KCNQ3-203ENST00000519589 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
KCNQ3-203ENST00000519589 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
KCNQ3-203ENST00000519589 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
KCNQ3-203ENST00000519589 BCANQ96GW7 911 aa12.12□□□□□ -0.47
KCNQ3-203ENST00000519589 FKBP8Q14318 412 aa12.11□□□□□ -0.47
KCNQ3-203ENST00000519589 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
KCNQ3-203ENST00000519589 CEP162Q5TB80 1403 aa12.1□□□□□ -0.47
KCNQ3-203ENST00000519589 CARMIL1Q5VZK9 1371 aa12.09□□□□□ -0.47
KCNQ3-203ENST00000519589 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
KCNQ3-203ENST00000519589 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
KCNQ3-203ENST00000519589 RAPGEF2Q9Y4G8 1499 aa12.04□□□□□ -0.48
KCNQ3-203ENST00000519589 PLPPR3Q6T4P5 718 aa12.04□□□□□ -0.48
KCNQ3-203ENST00000519589 TOP2BQ02880 1626 aa12.02□□□□□ -0.48
KCNQ3-203ENST00000519589 ITGAEP38570 1179 aa12.02□□□□□ -0.49
KCNQ3-203ENST00000519589 IGF1RP08069 1367 aa12.01□□□□□ -0.49
KCNQ3-203ENST00000519589 EIF4G3O43432 1585 aaKnown RBP11.99□□□□□ -0.49
KCNQ3-203ENST00000519589 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
KCNQ3-203ENST00000519589 GOLGA3Q08378 1498 aa11.98□□□□□ -0.49
KCNQ3-203ENST00000519589 DHX57Q6P158 1386 aaKnown RBP11.98□□□□□ -0.49
KCNQ3-203ENST00000519589 EEA1Q15075 1411 aa11.97□□□□□ -0.49
KCNQ3-203ENST00000519589 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
KCNQ3-203ENST00000519589 FAM69CQ0P6D2 419 aa11.96□□□□□ -0.49
KCNQ3-203ENST00000519589 PRG4Q92954 1404 aaPredicted RBP11.95□□□□□ -0.5
KCNQ3-203ENST00000519589 FHAD1B1AJZ9 1412 aa11.95□□□□□ -0.5
KCNQ3-203ENST00000519589 CLIP1P30622 1438 aa11.94□□□□□ -0.5
KCNQ3-203ENST00000519589 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
KCNQ3-203ENST00000519589 ABCA10Q8WWZ4 1543 aa11.94□□□□□ -0.5
KCNQ3-203ENST00000519589 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.51
KCNQ3-203ENST00000519589 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.51
KCNQ3-203ENST00000519589 PTPRGP23470 1445 aa11.89□□□□□ -0.51
KCNQ3-203ENST00000519589 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
KCNQ3-203ENST00000519589 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
KCNQ3-203ENST00000519589 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
KCNQ3-203ENST00000519589 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
KCNQ3-203ENST00000519589 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
KCNQ3-203ENST00000519589 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
KCNQ3-203ENST00000519589 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
KCNQ3-203ENST00000519589 WASHC2AQ641Q2 1341 aa11.85□□□□□ -0.51
KCNQ3-203ENST00000519589 NOP58Q9Y2X3 529 aaKnown RBP11.84□□□□□ -0.51
KCNQ3-203ENST00000519589 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
KCNQ3-203ENST00000519589 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
KCNQ3-203ENST00000519589 PKNOX2Q96KN3 472 aa11.83□□□□□ -0.52
KCNQ3-203ENST00000519589 NEFLP07196 543 aa11.83□□□□□ -0.52
KCNQ3-203ENST00000519589 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
KCNQ3-203ENST00000519589 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
KCNQ3-203ENST00000519589 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
KCNQ3-203ENST00000519589 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
KCNQ3-203ENST00000519589 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
KCNQ3-203ENST00000519589 KANK4Q5T7N3 995 aaPredicted RBP11.8□□□□□ -0.52
KCNQ3-203ENST00000519589 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
KCNQ3-203ENST00000519589 PLEKHD1A6NEE1 506 aa11.79□□□□□ -0.52
KCNQ3-203ENST00000519589 NBR1Q14596 966 aa11.79□□□□□ -0.52
KCNQ3-203ENST00000519589 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
KCNQ3-203ENST00000519589 CHD1O14646 1710 aa11.79□□□□□ -0.52
KCNQ3-203ENST00000519589 MAPKBP1O60336 1514 aa11.79□□□□□ -0.52
KCNQ3-203ENST00000519589 ARID4BQ4LE39 1312 aaPredicted RBP11.78□□□□□ -0.52
KCNQ3-203ENST00000519589 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
KCNQ3-203ENST00000519589 CCER2I3L3R5 266 aa11.78□□□□□ -0.52
KCNQ3-203ENST00000519589 MLECQ14165 292 aa11.76□□□□□ -0.53
KCNQ3-203ENST00000519589 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
KCNQ3-203ENST00000519589 FAM50AQ14320 339 aaKnown RBP11.75□□□□□ -0.53
KCNQ3-203ENST00000519589 ERCC6L2Q5T890 1561 aa11.74□□□□□ -0.53
KCNQ3-203ENST00000519589 VPS8Q8N3P4 1428 aa11.74□□□□□ -0.53
KCNQ3-203ENST00000519589 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
KCNQ3-203ENST00000519589 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
KCNQ3-203ENST00000519589 KIF21BO75037 1637 aa11.73□□□□□ -0.53
KCNQ3-203ENST00000519589 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
KCNQ3-203ENST00000519589 KIAA0586Q9BVV6 1533 aa11.72□□□□□ -0.53
KCNQ3-203ENST00000519589 RIMBP3CA6NJZ7 1639 aa11.72□□□□□ -0.53
KCNQ3-203ENST00000519589 RIMBP3BA6NNM3 1639 aa11.72□□□□□ -0.53
KCNQ3-203ENST00000519589 RIMBP3Q9UFD9 1639 aa11.72□□□□□ -0.53
KCNQ3-203ENST00000519589 ADAMTS12P58397 1594 aa11.7□□□□□ -0.54
KCNQ3-203ENST00000519589 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
KCNQ3-203ENST00000519589 CEP170Q5SW79 1584 aa11.69□□□□□ -0.54
KCNQ3-203ENST00000519589 NUP160Q12769 1436 aa11.69□□□□□ -0.54
KCNQ3-203ENST00000519589 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
KCNQ3-203ENST00000519589 ARHGAP35Q9NRY4 1499 aa11.69□□□□□ -0.54
KCNQ3-203ENST00000519589 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
KCNQ3-203ENST00000519589 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
KCNQ3-203ENST00000519589 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
KCNQ3-203ENST00000519589 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
KCNQ3-203ENST00000519589 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms