RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
KCNQ3-203ENST00000519589 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
KCNQ3-203ENST00000519589 ABCC9O60706 1549 aa15.1■□□□□ 0.01
KCNQ3-203ENST00000519589 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
KCNQ3-203ENST00000519589 HRCP23327 699 aa14.6□□□□□ -0.07
KCNQ3-203ENST00000519589 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
KCNQ3-203ENST00000519589 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
KCNQ3-203ENST00000519589 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
KCNQ3-203ENST00000519589 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
KCNQ3-203ENST00000519589 MYT1Q01538 1121 aa14.17□□□□□ -0.14
KCNQ3-203ENST00000519589 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.15
KCNQ3-203ENST00000519589 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
KCNQ3-203ENST00000519589 SUPT5HO00267 1087 aaKnown RBP14□□□□□ -0.17
KCNQ3-203ENST00000519589 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
KCNQ3-203ENST00000519589 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
KCNQ3-203ENST00000519589 PCGF6Q9BYE7 350 aa13.88□□□□□ -0.19
KCNQ3-203ENST00000519589 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
KCNQ3-203ENST00000519589 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
KCNQ3-203ENST00000519589 NACADO15069 1562 aa13.81□□□□□ -0.2
KCNQ3-203ENST00000519589 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
KCNQ3-203ENST00000519589 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
KCNQ3-203ENST00000519589 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.24
KCNQ3-203ENST00000519589 ACIN1Q9UKV3 1341 aaKnown RBP13.52□□□□□ -0.25
KCNQ3-203ENST00000519589 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
KCNQ3-203ENST00000519589 TRIM26Q12899 539 aaPredicted RBP13.42□□□□□ -0.26
KCNQ3-203ENST00000519589 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
KCNQ3-203ENST00000519589 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
KCNQ3-203ENST00000519589 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
KCNQ3-203ENST00000519589 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
KCNQ3-203ENST00000519589 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
KCNQ3-203ENST00000519589 UNC13AQ9UPW8 1703 aa13.26□□□□□ -0.29
KCNQ3-203ENST00000519589 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
KCNQ3-203ENST00000519589 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
KCNQ3-203ENST00000519589 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
KCNQ3-203ENST00000519589 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
KCNQ3-203ENST00000519589 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
KCNQ3-203ENST00000519589 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
KCNQ3-203ENST00000519589 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
KCNQ3-203ENST00000519589 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
KCNQ3-203ENST00000519589 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
KCNQ3-203ENST00000519589 BAZ1BQ9UIG0 1483 aaKnown RBP13.07□□□□□ -0.32
KCNQ3-203ENST00000519589 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
KCNQ3-203ENST00000519589 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
KCNQ3-203ENST00000519589 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
KCNQ3-203ENST00000519589 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
KCNQ3-203ENST00000519589 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.34
KCNQ3-203ENST00000519589 FBLN2P98095 1184 aa12.94□□□□□ -0.34
KCNQ3-203ENST00000519589 NESP48681 1621 aa12.93□□□□□ -0.34
KCNQ3-203ENST00000519589 WIZO95785 1651 aa12.93□□□□□ -0.34
KCNQ3-203ENST00000519589 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
KCNQ3-203ENST00000519589 SMARCA4P51532 1647 aa12.9□□□□□ -0.34
KCNQ3-203ENST00000519589 SMARCA2P51531 1590 aa12.88□□□□□ -0.35
KCNQ3-203ENST00000519589 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
KCNQ3-203ENST00000519589 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
KCNQ3-203ENST00000519589 APLP2Q06481 763 aa12.82□□□□□ -0.36
KCNQ3-203ENST00000519589 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
KCNQ3-203ENST00000519589 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
KCNQ3-203ENST00000519589 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
KCNQ3-203ENST00000519589 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
KCNQ3-203ENST00000519589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
KCNQ3-203ENST00000519589 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
KCNQ3-203ENST00000519589 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-203ENST00000519589 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
KCNQ3-203ENST00000519589 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
KCNQ3-203ENST00000519589 MIER1Q8N108 512 aa12.64□□□□□ -0.39
KCNQ3-203ENST00000519589 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
KCNQ3-203ENST00000519589 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
KCNQ3-203ENST00000519589 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
KCNQ3-203ENST00000519589 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
KCNQ3-203ENST00000519589 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
KCNQ3-203ENST00000519589 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
KCNQ3-203ENST00000519589 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
KCNQ3-203ENST00000519589 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
KCNQ3-203ENST00000519589 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
KCNQ3-203ENST00000519589 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
KCNQ3-203ENST00000519589 UBTFP17480 764 aaKnown RBP12.48□□□□□ -0.41
KCNQ3-203ENST00000519589 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
KCNQ3-203ENST00000519589 CFTRP13569 1480 aa12.46□□□□□ -0.41
KCNQ3-203ENST00000519589 CYB5RLQ6IPT4 315 aa12.46□□□□□ -0.41
KCNQ3-203ENST00000519589 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
KCNQ3-203ENST00000519589 MSH5O43196 834 aa12.44□□□□□ -0.42
KCNQ3-203ENST00000519589 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
KCNQ3-203ENST00000519589 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
KCNQ3-203ENST00000519589 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
KCNQ3-203ENST00000519589 PEG3Q9GZU2 1588 aa12.43□□□□□ -0.42
KCNQ3-203ENST00000519589 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
KCNQ3-203ENST00000519589 SOGA1O94964 1423 aa12.42□□□□□ -0.42
KCNQ3-203ENST00000519589 RAD54L2Q9Y4B4 1467 aa12.42□□□□□ -0.42
KCNQ3-203ENST00000519589 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
KCNQ3-203ENST00000519589 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
KCNQ3-203ENST00000519589 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
KCNQ3-203ENST00000519589 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
KCNQ3-203ENST00000519589 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
KCNQ3-203ENST00000519589 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
KCNQ3-203ENST00000519589 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
KCNQ3-203ENST00000519589 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
KCNQ3-203ENST00000519589 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
KCNQ3-203ENST00000519589 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
KCNQ3-203ENST00000519589 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
KCNQ3-203ENST00000519589 CUX2O14529 1486 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms