RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 RUSC2Q8N2Y8 1516 aa9.08□□□□□ -0.96
PROM1-211ENST00000511153 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
PROM1-211ENST00000511153 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
PROM1-211ENST00000511153 FBLN2P98095 1184 aa9.05□□□□□ -0.96
PROM1-211ENST00000511153 ABCA10Q8WWZ4 1543 aa9.04□□□□□ -0.96
PROM1-211ENST00000511153 GAPVD1Q14C86 1478 aa9.03□□□□□ -0.96
PROM1-211ENST00000511153 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
PROM1-211ENST00000511153 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
PROM1-211ENST00000511153 ABCA5Q8WWZ7 1642 aa9.01□□□□□ -0.97
PROM1-211ENST00000511153 SNAPC4Q5SXM2 1469 aa9.01□□□□□ -0.97
PROM1-211ENST00000511153 POTEHQ6S545 545 aa9□□□□□ -0.97
PROM1-211ENST00000511153 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
PROM1-211ENST00000511153 ATXN8OSP0DMR3 200 aa8.99□□□□□ -0.97
PROM1-211ENST00000511153 GRIN2BQ13224 1484 aa8.98□□□□□ -0.97
PROM1-211ENST00000511153 SAMD1Q6SPF0 538 aaPredicted RBP8.97□□□□□ -0.97
PROM1-211ENST00000511153 CHD1O14646 1710 aa8.96□□□□□ -0.97
PROM1-211ENST00000511153 CHMP7Q8WUX9 453 aaPredicted RBP8.95□□□□□ -0.98
PROM1-211ENST00000511153 IGF1RP08069 1367 aa8.95□□□□□ -0.98
PROM1-211ENST00000511153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
PROM1-211ENST00000511153 RANGAP1P46060 587 aaPredicted RBP8.95□□□□□ -0.98
PROM1-211ENST00000511153 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
PROM1-211ENST00000511153 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
PROM1-211ENST00000511153 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
PROM1-211ENST00000511153 CARMIL1Q5VZK9 1371 aa8.92□□□□□ -0.98
PROM1-211ENST00000511153 ERICH3Q5RHP9 1530 aa8.91□□□□□ -0.98
PROM1-211ENST00000511153 MAGI1Q96QZ7 1491 aaPredicted RBP8.91□□□□□ -0.98
PROM1-211ENST00000511153 LOC105371045A0A1W2PR82 267 aa8.9□□□□□ -0.99
PROM1-211ENST00000511153 FHAD1B1AJZ9 1412 aa8.89□□□□□ -0.99
PROM1-211ENST00000511153 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
PROM1-211ENST00000511153 GRIN2AQ12879 1464 aa8.88□□□□□ -0.99
PROM1-211ENST00000511153 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
PROM1-211ENST00000511153 CUL7Q14999 1698 aa8.87□□□□□ -0.99
PROM1-211ENST00000511153 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
PROM1-211ENST00000511153 OSCARQ8IYS5 282 aa8.86□□□□□ -0.99
PROM1-211ENST00000511153 CEP170Q5SW79 1584 aa8.86□□□□□ -0.99
PROM1-211ENST00000511153 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
PROM1-211ENST00000511153 EEA1Q15075 1411 aa8.85□□□□□ -0.99
PROM1-211ENST00000511153 TRHP20396 242 aaPredicted RBP8.85□□□□□ -0.99
PROM1-211ENST00000511153 C1QBPQ07021 282 aaKnown RBP8.85□□□□□ -0.99
PROM1-211ENST00000511153 PRXQ9BXM0 1461 aa8.84□□□□□ -0.99
PROM1-211ENST00000511153 CAPN15O75808 1086 aa8.82□□□□□ -1
PROM1-211ENST00000511153 P3H3Q8IVL6 736 aa8.82□□□□□ -1
PROM1-211ENST00000511153 ZNF219Q9P2Y4 722 aaPredicted RBP8.82□□□□□ -1
PROM1-211ENST00000511153 KIF21BO75037 1637 aa8.8□□□□□ -1
PROM1-211ENST00000511153 ERCC6L2Q5T890 1561 aa8.79□□□□□ -1
PROM1-211ENST00000511153 NUP160Q12769 1436 aa8.79□□□□□ -1
PROM1-211ENST00000511153 GOLGA3Q08378 1498 aa8.79□□□□□ -1
PROM1-211ENST00000511153 CTTNBP2Q8WZ74 1663 aa8.78□□□□□ -1
PROM1-211ENST00000511153 CLASP1Q7Z460 1538 aa8.78□□□□□ -1
PROM1-211ENST00000511153 APLP2Q06481 763 aa8.78□□□□□ -1
PROM1-211ENST00000511153 JPH4Q96JJ6 628 aa8.78□□□□□ -1
PROM1-211ENST00000511153 IQGAP2Q13576 1575 aa8.76□□□□□ -1.01
PROM1-211ENST00000511153 PRG4Q92954 1404 aaPredicted RBP8.76□□□□□ -1.01
PROM1-211ENST00000511153 KIAA0586Q9BVV6 1533 aa8.75□□□□□ -1.01
PROM1-211ENST00000511153 RIMBP3CA6NJZ7 1639 aa8.74□□□□□ -1.01
PROM1-211ENST00000511153 RIMBP3BA6NNM3 1639 aa8.74□□□□□ -1.01
PROM1-211ENST00000511153 RIMBP3Q9UFD9 1639 aa8.74□□□□□ -1.01
PROM1-211ENST00000511153 ARID3CA6NKF2 412 aa8.73□□□□□ -1.01
PROM1-211ENST00000511153 ABCB7O75027 752 aa8.73□□□□□ -1.01
PROM1-211ENST00000511153 CYB5RLQ6IPT4 315 aa8.73□□□□□ -1.01
PROM1-211ENST00000511153 ARHGEF11O15085 1522 aa8.73□□□□□ -1.01
PROM1-211ENST00000511153 POLA2Q14181 598 aa8.73□□□□□ -1.01
PROM1-211ENST00000511153 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.02
PROM1-211ENST00000511153 SHROOM2Q13796 1616 aa8.7□□□□□ -1.02
PROM1-211ENST00000511153 DISP1Q96F81 1524 aa8.7□□□□□ -1.02
PROM1-211ENST00000511153 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
PROM1-211ENST00000511153 TNIKQ9UKE5 1360 aa8.69□□□□□ -1.02
PROM1-211ENST00000511153 ARAP1Q96P48 1450 aa8.68□□□□□ -1.02
PROM1-211ENST00000511153 KIAA0556O60303 1618 aa8.68□□□□□ -1.02
PROM1-211ENST00000511153 CEP162Q5TB80 1403 aa8.68□□□□□ -1.02
PROM1-211ENST00000511153 CLIP1P30622 1438 aa8.67□□□□□ -1.02
PROM1-211ENST00000511153 CARMIL2Q6F5E8 1435 aa8.67□□□□□ -1.02
PROM1-211ENST00000511153 UGGT2Q9NYU1 1516 aa8.67□□□□□ -1.02
PROM1-211ENST00000511153 ARHGAP35Q9NRY4 1499 aa8.66□□□□□ -1.02
PROM1-211ENST00000511153 DSG3P32926 999 aa8.65□□□□□ -1.02
PROM1-211ENST00000511153 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.02
PROM1-211ENST00000511153 PTPRGP23470 1445 aa8.65□□□□□ -1.02
PROM1-211ENST00000511153 FKBP8Q14318 412 aa8.65□□□□□ -1.03
PROM1-211ENST00000511153 SAMD9Q5K651 1589 aa8.64□□□□□ -1.03
PROM1-211ENST00000511153 PLB1Q6P1J6 1458 aa8.64□□□□□ -1.03
PROM1-211ENST00000511153 EFCAB5A4FU69 1503 aa8.6□□□□□ -1.03
PROM1-211ENST00000511153 PPARGC1BQ86YN6 1023 aaKnown RBP8.6□□□□□ -1.03
PROM1-211ENST00000511153 ADCY10Q96PN6 1610 aa8.59□□□□□ -1.03
PROM1-211ENST00000511153 PCF11O94913 1555 aaKnown RBP8.58□□□□□ -1.04
PROM1-211ENST00000511153 UACAQ9BZF9 1416 aa8.58□□□□□ -1.04
PROM1-211ENST00000511153 RAPGEF6Q8TEU7 1601 aa8.57□□□□□ -1.04
PROM1-211ENST00000511153 CDK13Q14004 1512 aaKnown RBP8.56□□□□□ -1.04
PROM1-211ENST00000511153 ABCA8O94911 1581 aa8.55□□□□□ -1.04
PROM1-211ENST00000511153 LRRIQ1Q96JM4 1722 aa8.55□□□□□ -1.04
PROM1-211ENST00000511153 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
PROM1-211ENST00000511153 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
PROM1-211ENST00000511153 ABCC2Q92887 1545 aa8.54□□□□□ -1.04
PROM1-211ENST00000511153 NUP153P49790 1475 aaKnown RBP8.54□□□□□ -1.04
PROM1-211ENST00000511153 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
PROM1-211ENST00000511153 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
PROM1-211ENST00000511153 VPS8Q8N3P4 1428 aa8.52□□□□□ -1.05
PROM1-211ENST00000511153 ATP10BO94823 1461 aa8.52□□□□□ -1.05
PROM1-211ENST00000511153 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
PROM1-211ENST00000511153 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
PROM1-211ENST00000511153 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms