RNA–Protein interactions for RNA: ENST00000262407.5

ITGA2B-201, Transcript of integrin subunit alpha 2b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA2B, Length 3,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-201ENST00000262407 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
ITGA2B-201ENST00000262407 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
ITGA2B-201ENST00000262407 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
ITGA2B-201ENST00000262407 TDRD9Q8NDG6 1382 aaKnown RBP18.4■□□□□ 0.54
ITGA2B-201ENST00000262407 MSH5O43196 834 aa18.4■□□□□ 0.54
ITGA2B-201ENST00000262407 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
ITGA2B-201ENST00000262407 NEFLP07196 543 aa18.38■□□□□ 0.53
ITGA2B-201ENST00000262407 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
ITGA2B-201ENST00000262407 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.539e-7■■■■■ 31
ITGA2B-201ENST00000262407 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
ITGA2B-201ENST00000262407 ABCA5Q8WWZ7 1642 aa18.35■□□□□ 0.53
ITGA2B-201ENST00000262407 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
ITGA2B-201ENST00000262407 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.52
ITGA2B-201ENST00000262407 RTN4Q9NQC3 1192 aaKnown RBP18.32■□□□□ 0.52
ITGA2B-201ENST00000262407 NBR1Q14596 966 aa18.31■□□□□ 0.52
ITGA2B-201ENST00000262407 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
ITGA2B-201ENST00000262407 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
ITGA2B-201ENST00000262407 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
ITGA2B-201ENST00000262407 EEA1Q15075 1411 aa18.29■□□□□ 0.52
ITGA2B-201ENST00000262407 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
ITGA2B-201ENST00000262407 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.28■□□□□ 0.52
ITGA2B-201ENST00000262407 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
ITGA2B-201ENST00000262407 ERICH3Q5RHP9 1530 aa18.25■□□□□ 0.51
ITGA2B-201ENST00000262407 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
ITGA2B-201ENST00000262407 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
ITGA2B-201ENST00000262407 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
ITGA2B-201ENST00000262407 IGF1RP08069 1367 aa18.22■□□□□ 0.51
ITGA2B-201ENST00000262407 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
ITGA2B-201ENST00000262407 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
ITGA2B-201ENST00000262407 CUL7Q14999 1698 aa18.18■□□□□ 0.5
ITGA2B-201ENST00000262407 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
ITGA2B-201ENST00000262407 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
ITGA2B-201ENST00000262407 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
ITGA2B-201ENST00000262407 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
ITGA2B-201ENST00000262407 FBLN2P98095 1184 aa18.12■□□□□ 0.49
ITGA2B-201ENST00000262407 CHMP7Q8WUX9 453 aaPredicted RBP18.11■□□□□ 0.49
ITGA2B-201ENST00000262407 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
ITGA2B-201ENST00000262407 APLP2Q06481 763 aa18.09■□□□□ 0.49
ITGA2B-201ENST00000262407 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
ITGA2B-201ENST00000262407 CDK11AQ9UQ88 783 aaPredicted RBP18.07■□□□□ 0.48
ITGA2B-201ENST00000262407 CHD1O14646 1710 aa18.07■□□□□ 0.48
ITGA2B-201ENST00000262407 KIF21BO75037 1637 aa18.05■□□□□ 0.48
ITGA2B-201ENST00000262407 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
ITGA2B-201ENST00000262407 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
ITGA2B-201ENST00000262407 IL27Q8NEV9 243 aa18.03■□□□□ 0.48
ITGA2B-201ENST00000262407 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
ITGA2B-201ENST00000262407 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
ITGA2B-201ENST00000262407 GOLGA3Q08378 1498 aa18■□□□□ 0.47
ITGA2B-201ENST00000262407 CEP162Q5TB80 1403 aa18■□□□□ 0.47
ITGA2B-201ENST00000262407 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
ITGA2B-201ENST00000262407 NUP160Q12769 1436 aa17.94■□□□□ 0.46
ITGA2B-201ENST00000262407 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
ITGA2B-201ENST00000262407 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
ITGA2B-201ENST00000262407 CTTNBP2Q8WZ74 1663 aa17.9■□□□□ 0.46
ITGA2B-201ENST00000262407 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
ITGA2B-201ENST00000262407 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
ITGA2B-201ENST00000262407 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
ITGA2B-201ENST00000262407 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
ITGA2B-201ENST00000262407 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
ITGA2B-201ENST00000262407 MYT1LQ9UL68 1186 aa17.84■□□□□ 0.45
ITGA2B-201ENST00000262407 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.44
ITGA2B-201ENST00000262407 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
ITGA2B-201ENST00000262407 B4GALNT3Q6L9W6 998 aa17.8■□□□□ 0.44
ITGA2B-201ENST00000262407 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
ITGA2B-201ENST00000262407 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
ITGA2B-201ENST00000262407 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
ITGA2B-201ENST00000262407 UGGT2Q9NYU1 1516 aa17.75■□□□□ 0.43
ITGA2B-201ENST00000262407 UBE2Q2Q8WVN8 375 aa17.73■□□□□ 0.43
ITGA2B-201ENST00000262407 ANP32CO43423 234 aa17.72■□□□□ 0.43
ITGA2B-201ENST00000262407 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
ITGA2B-201ENST00000262407 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
ITGA2B-201ENST00000262407 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
ITGA2B-201ENST00000262407 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
ITGA2B-201ENST00000262407 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
ITGA2B-201ENST00000262407 CLIP1P30622 1438 aa17.68■□□□□ 0.42
ITGA2B-201ENST00000262407 EFCAB5A4FU69 1503 aa17.68■□□□□ 0.42
ITGA2B-201ENST00000262407 LAS1LQ9Y4W2 734 aaKnown RBP17.68■□□□□ 0.42
ITGA2B-201ENST00000262407 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
ITGA2B-201ENST00000262407 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
ITGA2B-201ENST00000262407 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
ITGA2B-201ENST00000262407 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
ITGA2B-201ENST00000262407 P3H3Q8IVL6 736 aa17.65■□□□□ 0.42
ITGA2B-201ENST00000262407 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
ITGA2B-201ENST00000262407 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
ITGA2B-201ENST00000262407 CNGB1Q14028 1251 aaPredicted RBP17.64■□□□□ 0.41
ITGA2B-201ENST00000262407 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
ITGA2B-201ENST00000262407 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
ITGA2B-201ENST00000262407 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
ITGA2B-201ENST00000262407 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
ITGA2B-201ENST00000262407 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
ITGA2B-201ENST00000262407 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
ITGA2B-201ENST00000262407 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
ITGA2B-201ENST00000262407 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
ITGA2B-201ENST00000262407 SIN3AQ96ST3 1273 aa17.59■□□□□ 0.41
ITGA2B-201ENST00000262407 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.41
ITGA2B-201ENST00000262407 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
ITGA2B-201ENST00000262407 PTPRGP23470 1445 aa17.56■□□□□ 0.4
ITGA2B-201ENST00000262407 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
ITGA2B-201ENST00000262407 NEFMP07197 916 aa17.55■□□□□ 0.4
ITGA2B-201ENST00000262407 PKNOX2Q96KN3 472 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms