RNA–Protein interactions for RNA: YOR063W

RPL3, Transcript of Ribosomal 60S subunit protein L3, yeast

Gene RPL3, Length 1,164 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL3	YOR063W	SAP190	P36123	1033 aa		5.71	□□□□□ -1.5
RPL3	YOR063W	RRM3	P38766	723 aa		5.71	□□□□□ -1.5
RPL3	YOR063W	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
RPL3	YOR063W	CNM67	P53865	581 aa	Known RBP	5.71	□□□□□ -1.5
RPL3	YOR063W	ECM38	Q05902	660 aa	Predicted RBP	5.71	□□□□□ -1.5
RPL3	YOR063W	PCL8	Q08966	492 aa		5.71	□□□□□ -1.5
RPL3	YOR063W	KEL3	Q08979	651 aa	Predicted RBP	5.71	□□□□□ -1.5
RPL3	YOR063W	DCS2	Q12123	353 aa		5.71	□□□□□ -1.5
RPL3	YOR063W	RPS21B	Q3E754	87 aa	Known RBP	5.71	□□□□□ -1.5
RPL3	YOR063W	RPS9A	O13516	197 aa	Known RBP	5.7	□□□□□ -1.5
RPL3	YOR063W	MSS18	P08593	268 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	SRO9	P25567	434 aa	Known RBP	5.7	□□□□□ -1.5
RPL3	YOR063W	MCM4	P30665	933 aa	Known RBP	5.7	□□□□□ -1.5
RPL3	YOR063W	YHL012W	P38709	493 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	SET5	P38890	526 aa	Known RBP	5.7	□□□□□ -1.5
RPL3	YOR063W	YER130C	P39959	443 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	QRI7	P43122	407 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	YFL052W	P43551	465 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	YPT11	P48559	417 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	HFM1	P51979	1187 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	MYO5	Q04439	1219 aa	Known RBP	5.7	□□□□□ -1.5
RPL3	YOR063W	CRR1	Q05790	422 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	RSB1	Q08417	382 aa		5.7	□□□□□ -1.5
RPL3	YOR063W	ETT1	Q08421	412 aa	Known RBP	5.7	□□□□□ -1.5
RPL3	YOR063W	RNR3	P21672	869 aa	Known RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	GFD2	P25370	566 aa	Known RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	SEC65	P29478	273 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	YKR051W	P36142	418 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	RFT1	P38206	574 aa	Predicted RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	RXT2	P38255	430 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	YAP1801	P38856	637 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	VPS8	P39702	1274 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	PCI8	P40512	444 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	CEP3	P40969	608 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	BFA1	P47113	574 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	BNA2	P47125	453 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	RNR4	P49723	345 aa	Known RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	ESF2	P53743	316 aa	Known RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	RPT6	Q01939	405 aa	Known RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	VPS30	Q02948	557 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	YPL277C	Q08989	487 aa		5.69	□□□□□ -1.5
RPL3	YOR063W	GET3	Q12154	354 aa	Known RBP	5.69	□□□□□ -1.5
RPL3	YOR063W	NAM7	P30771	971 aa	Known RBP	5.68	□□□□□ -1.5
RPL3	YOR063W	MIC60	P36112	540 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	MRPL10	P36520	322 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	TOM71	P38825	639 aa	Known RBP	5.68	□□□□□ -1.5
RPL3	YOR063W	SKP2	P42843	763 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	CAF120	P53836	1060 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	SDH1	Q00711	640 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	GIR2	Q03768	265 aa	Predicted RBP	5.68	□□□□□ -1.5
RPL3	YOR063W	YDR341C	Q05506	607 aa	Known RBP	5.68	□□□□□ -1.5
RPL3	YOR063W	DUS4	Q06063	367 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	SVS1	Q12254	260 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	YOL114C	Q12322	202 aa		5.68	□□□□□ -1.5
RPL3	YOR063W	PRC1	P00729	532 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	SAM35	P14693	329 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	SRP54	P20424	541 aa	Known RBP	5.67	□□□□□ -1.5
RPL3	YOR063W	PRE8	P23639	250 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	CHS3	P29465	1165 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	STE13	P33894	931 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	YKT6	P36015	200 aa	Known RBP	5.67	□□□□□ -1.5
RPL3	YOR063W	MNN4	P36044	1178 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	YKR018C	P36114	725 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	FAT1	P38225	669 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	IML2	P47031	731 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	HOL1	P53389	586 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	YKR011C	Q02209	353 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	RSC58	Q07979	502 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
RPL3	YOR063W	YLR149C	Q99296	730 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	Q0142	Q9ZZW4	58 aa		5.67	□□□□□ -1.5
RPL3	YOR063W	ECM29	P38737	1868 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	RPL40A	P0CH08	128 aa	Known RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	RPL40B	P0CH09	128 aa	Known RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	HSC82	P15108	705 aa	Known RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	GSY2	P27472	705 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	PET309	P32522	965 aa	Predicted RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	TYE7	P33122	291 aa	Predicted RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	POA1	P38218	177 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	JJJ3	P47138	172 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	UBA2	P52488	636 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	CEG1	Q01159	459 aa	Predicted RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	MDM1	Q01846	1127 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	EIS1	Q05050	843 aa	Known RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	XYL2	Q07993	356 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	DSE3	Q08729	430 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	THI21	Q08975	551 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	YOR022C	Q12204	715 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	YVC1	Q12324	675 aa		5.66	□□□□□ -1.5
RPL3	YOR063W	SEN1	Q00416	2231 aa	Known RBP	5.66	□□□□□ -1.5
RPL3	YOR063W	SES1	P07284	462 aa	Known RBP	5.65	□□□□□ -1.5
RPL3	YOR063W	NUC1	P08466	329 aa		5.65	□□□□□ -1.5
RPL3	YOR063W	POL3	P15436	1097 aa		5.65	□□□□□ -1.5
RPL3	YOR063W	SAM2	P19358	384 aa	Known RBP	5.65	□□□□□ -1.5
RPL3	YOR063W	HOP1	P20050	605 aa		5.65	□□□□□ -1.5
RPL3	YOR063W	ATP12	P22135	325 aa		5.65	□□□□□ -1.5
RPL3	YOR063W	MSH1	P25846	959 aa		5.65	□□□□□ -1.5
RPL3	YOR063W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
RPL3	YOR063W	TRK2	P28584	889 aa		5.65	□□□□□ -1.5
RPL3	YOR063W	SFA1	P32771	386 aa		5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms