RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W GAC1P28006 793 aa6.47□□□□□ -1.37
CAF40YNL288W TRZ1P36159 838 aaPredicted RBP6.47□□□□□ -1.37
CAF40YNL288W YMC2P38087 329 aa6.47□□□□□ -1.37
CAF40YNL288W AGP2P38090 596 aa6.47□□□□□ -1.37
CAF40YNL288W YBR284WP38150 797 aa6.47□□□□□ -1.37
CAF40YNL288W GEM1P39722 662 aa6.47□□□□□ -1.37
CAF40YNL288W FAF1P40546 346 aaPredicted RBP6.47□□□□□ -1.37
CAF40YNL288W IES1P43579 692 aa6.47□□□□□ -1.37
CAF40YNL288W TAF1P46677 1066 aa6.47□□□□□ -1.37
CAF40YNL288W CTR9P89105 1077 aa6.47□□□□□ -1.37
CAF40YNL288W ADA2Q02336 434 aa6.47□□□□□ -1.37
CAF40YNL288W YCG1Q06680 1035 aa6.47□□□□□ -1.37
CAF40YNL288W OPY2Q06810 360 aa6.47□□□□□ -1.37
CAF40YNL288W ATG9Q12142 997 aa6.47□□□□□ -1.37
CAF40YNL288W APM4Q99186 491 aa6.47□□□□□ -1.37
CAF40YNL288W FRT1Q99332 602 aa6.47□□□□□ -1.37
CAF40YNL288W YER152CP10356 443 aa6.46□□□□□ -1.38
CAF40YNL288W SAT4P25333 603 aaKnown RBP6.46□□□□□ -1.38
CAF40YNL288W RAD27P26793 382 aa6.46□□□□□ -1.38
CAF40YNL288W MCM2P29469 868 aa6.46□□□□□ -1.38
CAF40YNL288W MET4P32389 672 aa6.46□□□□□ -1.38
CAF40YNL288W GCS1P35197 352 aa6.46□□□□□ -1.38
CAF40YNL288W DSE1P40077 573 aa6.46□□□□□ -1.38
CAF40YNL288W TAD1P53065 400 aa6.46□□□□□ -1.38
CAF40YNL288W YNR065CP53751 1116 aa6.46□□□□□ -1.38
CAF40YNL288W ERG5P54781 538 aa6.46□□□□□ -1.38
CAF40YNL288W UTP5Q04177 643 aaKnown RBP6.46□□□□□ -1.38
CAF40YNL288W YLR422WQ06409 1932 aa6.45□□□□□ -1.38
CAF40YNL288W TRP2P00899 507 aaKnown RBP6.45□□□□□ -1.38
CAF40YNL288W MAS1P10507 462 aa6.45□□□□□ -1.38
CAF40YNL288W SPO12P17123 173 aa6.45□□□□□ -1.38
CAF40YNL288W PGS1P25578 521 aa6.45□□□□□ -1.38
CAF40YNL288W VBA3P25594 458 aa6.45□□□□□ -1.38
CAF40YNL288W FRE1P32791 686 aa6.45□□□□□ -1.38
CAF40YNL288W VBA5P36172 582 aa6.45□□□□□ -1.38
CAF40YNL288W JNM1P36224 373 aa6.45□□□□□ -1.38
CAF40YNL288W YHL008CP38750 627 aa6.45□□□□□ -1.38
CAF40YNL288W YHR219WP38900 624 aa6.45□□□□□ -1.38
CAF40YNL288W CCC2P38995 1004 aa6.45□□□□□ -1.38
CAF40YNL288W YTA12P40341 825 aa6.45□□□□□ -1.38
CAF40YNL288W SHQ1P40486 507 aaPredicted RBP6.45□□□□□ -1.38
CAF40YNL288W MMM1P41800 426 aa6.45□□□□□ -1.38
CAF40YNL288W PHO86P46956 311 aa6.45□□□□□ -1.38
CAF40YNL288W ZAP1P47043 880 aa6.45□□□□□ -1.38
CAF40YNL288W MND1P53102 219 aa6.45□□□□□ -1.38
CAF40YNL288W ARI1P53111 347 aaKnown RBP6.45□□□□□ -1.38
CAF40YNL288W YGL036WP53185 909 aaPredicted RBP6.45□□□□□ -1.38
CAF40YNL288W MUB1Q03162 620 aa6.45□□□□□ -1.38
CAF40YNL288W PIG1Q06216 648 aa6.45□□□□□ -1.38
CAF40YNL288W LEA1Q08963 238 aaPredicted RBP6.45□□□□□ -1.38
CAF40YNL288W GPM2Q12008 311 aa6.45□□□□□ -1.38
CAF40YNL288W JIP3O13555 125 aa6.44□□□□□ -1.38
CAF40YNL288W RSC6P25632 483 aa6.44□□□□□ -1.38
CAF40YNL288W TKL2P33315 681 aa6.44□□□□□ -1.38
CAF40YNL288W SAF1P38352 637 aa6.44□□□□□ -1.38
CAF40YNL288W YIR016WP40572 265 aa6.44□□□□□ -1.38
CAF40YNL288W OYE3P41816 400 aaPredicted RBP6.44□□□□□ -1.38
CAF40YNL288W VPS25P47142 202 aa6.44□□□□□ -1.38
CAF40YNL288W HOP2P53187 214 aa6.44□□□□□ -1.38
CAF40YNL288W ALF1P53904 254 aa6.44□□□□□ -1.38
CAF40YNL288W ERV41Q04651 352 aa6.44□□□□□ -1.38
CAF40YNL288W VPS38Q05919 439 aa6.44□□□□□ -1.38
CAF40YNL288W YLR257WQ06146 321 aaKnown RBP6.44□□□□□ -1.38
CAF40YNL288W APC5Q08683 685 aa6.44□□□□□ -1.38
CAF40YNL288W TRE1Q08919 783 aa6.44□□□□□ -1.38
CAF40YNL288W APL4Q12028 832 aa6.44□□□□□ -1.38
CAF40YNL288W TY1A-NL1Q12391 440 aaKnown RBP6.44□□□□□ -1.38
CAF40YNL288W MTF2P10849 440 aa6.43□□□□□ -1.38
CAF40YNL288W CYC8P14922 966 aa6.43□□□□□ -1.38
CAF40YNL288W PEP7P32609 515 aa6.43□□□□□ -1.38
CAF40YNL288W MAE1P36013 669 aaKnown RBP6.43□□□□□ -1.38
CAF40YNL288W EXO5P38289 585 aa6.43□□□□□ -1.38
CAF40YNL288W YJL045WP47052 634 aa6.43□□□□□ -1.38
CAF40YNL288W SAM37P50110 327 aa6.43□□□□□ -1.38
CAF40YNL288W PUS2P53167 370 aa6.43□□□□□ -1.38
CAF40YNL288W YGR021WP53212 290 aa6.43□□□□□ -1.38
CAF40YNL288W GPD1Q00055 391 aaKnown RBP6.43□□□□□ -1.38
CAF40YNL288W HAS1Q03532 505 aaKnown RBP6.43□□□□□ -1.38
CAF40YNL288W ARO80Q04052 950 aa6.43□□□□□ -1.38
CAF40YNL288W SPE3Q12074 293 aaKnown RBP6.43□□□□□ -1.38
CAF40YNL288W FLP1P03870 423 aa6.42□□□□□ -1.38
CAF40YNL288W SEC23P15303 768 aaKnown RBP6.42□□□□□ -1.38
CAF40YNL288W LRE1P25579 583 aaKnown RBP6.42□□□□□ -1.38
CAF40YNL288W PEX2P32800 271 aa6.42□□□□□ -1.38
CAF40YNL288W MRP4P32902 394 aa6.42□□□□□ -1.38
CAF40YNL288W YKL050CP35736 922 aa6.42□□□□□ -1.38
CAF40YNL288W PCM1P38628 557 aaKnown RBP6.42□□□□□ -1.38
CAF40YNL288W TDA3P38758 523 aa6.42□□□□□ -1.38
CAF40YNL288W YGR111WP53265 400 aa6.42□□□□□ -1.38
CAF40YNL288W PRM6Q04705 352 aa6.42□□□□□ -1.38
CAF40YNL288W MDM38Q08179 573 aa6.42□□□□□ -1.38
CAF40YNL288W NBP2Q12163 236 aa6.42□□□□□ -1.38
CAF40YNL288W HRT3Q12347 344 aa6.42□□□□□ -1.38
CAF40YNL288W YOL098CQ12496 1037 aa6.42□□□□□ -1.38
CAF40YNL288W YDR034W-BQ6Q5X2 51 aa6.42□□□□□ -1.38
CAF40YNL288W SPE1P08432 466 aa6.41□□□□□ -1.38
CAF40YNL288W HMG2P12684 1045 aa6.41□□□□□ -1.38
CAF40YNL288W RRP43P25359 394 aaPredicted RBP6.41□□□□□ -1.38
CAF40YNL288W COQ2P32378 372 aa6.41□□□□□ -1.38
CAF40YNL288W HXT1P32465 570 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms