RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP11, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP11	YDL043C	ERG6	P25087	383 aa	Known RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	KIN82	P25341	720 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	CDC20	P26309	610 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	IMP2'	P32351	346 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PRP11	YDL043C	SLC1	P33333	303 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	CTF13	P35203	478 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	YHR218W	P38899	603 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	KAP123	P40069	1113 aa	Known RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	TMA108	P40462	946 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PRP11	YDL043C	TAH11	P47112	604 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	CTH1	P47976	325 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	JJJ1	P53863	590 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	YNL058C	P53947	316 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	YDR132C	Q03900	495 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	YAP6	Q03935	383 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	GAD1	Q04792	585 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	YPR172W	Q06608	200 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	IWR1	Q07532	353 aa	Predicted RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	BRE4	Q07660	1125 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	AAD4	Q07747	329 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	TGL5	Q12043	749 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	SGT2	Q12118	346 aa	Known RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	HOS1	Q12214	470 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	POM34	Q12445	299 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	ATG11	Q12527	1178 aa		4.23	□□□□□ -1.73
PRP11	YDL043C	BRR1	Q99177	341 aa	Predicted RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	HRP1	Q99383	534 aa	Known RBP	4.23	□□□□□ -1.73
PRP11	YDL043C	SKI3	P17883	1432 aa	Known RBP	4.22	□□□□□ -1.73
PRP11	YDL043C	POL3	P15436	1097 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	KAR3	P17119	729 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	UBC1	P21734	215 aa	Known RBP	4.22	□□□□□ -1.73
PRP11	YDL043C	CLB4	P24871	460 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	ZUO1	P32527	433 aa	Known RBP	4.22	□□□□□ -1.73
PRP11	YDL043C	LIP5	P32875	414 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	ARC19	P33204	171 aa	Known RBP	4.22	□□□□□ -1.73
PRP11	YDL043C	BYE1	P36106	594 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	CDS1	P38221	457 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	PLB1	P39105	664 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	BNA1	P47096	177 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	MRPS35	P53292	345 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	MRPL22	P53881	309 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	VTC3	Q02725	835 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	ERV41	Q04651	352 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	HEL2	Q05580	639 aa	Known RBP	4.22	□□□□□ -1.73
PRP11	YDL043C	YLR224W	Q05947	369 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	ARR1	Q06596	294 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	CRD1	Q07560	283 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	DIA2	Q08496	732 aa	Predicted RBP	4.22	□□□□□ -1.73
PRP11	YDL043C	MED1	Q12321	566 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	ECM3	Q99252	613 aa		4.22	□□□□□ -1.73
PRP11	YDL043C	ARG1	P22768	420 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	PEX1	P24004	1043 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	KAR4	P25583	335 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	BRF1	P29056	596 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	FRD1	P32614	470 aa	Known RBP	4.21	□□□□□ -1.74
PRP11	YDL043C	RPT3	P33298	428 aa	Known RBP	4.21	□□□□□ -1.74
PRP11	YDL043C	SEG2	P34250	1132 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	YBR138C	P38277	524 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	GET2	P40056	285 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	PSF2	P40359	213 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	GPI8	P49018	411 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	MDR1	P53258	950 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	CTK1	Q03957	528 aa	Known RBP	4.21	□□□□□ -1.74
PRP11	YDL043C	TFC6	Q06339	672 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	NFI1	Q12216	726 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	CHD1	P32657	1468 aa		4.21	□□□□□ -1.74
PRP11	YDL043C	INH1	P01097	85 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	TUF1	P02992	437 aa	Known RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	RPS9B	P05755	195 aa	Known RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	SNF1	P06782	633 aa	Known RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	SEC15	P22224	910 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	SWI3	P32591	825 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	NIP100	P33420	868 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	JNM1	P36224	373 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	LYS9	P38999	446 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	GSM1	P42950	618 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	YDL183C	P48569	320 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	CTF18	P49956	741 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	KEL2	P50090	882 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	ERG5	P54781	538 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	TIM11	P81449	96 aa	Predicted RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	ACS1	Q01574	713 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	VID22	Q05934	901 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	TSR2	Q06672	205 aa	Known RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	YCG1	Q06680	1035 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	RIX7	Q07844	837 aa	Known RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	SNU66	Q12420	587 aa	Predicted RBP	4.2	□□□□□ -1.74
PRP11	YDL043C	DFG16	Q99234	619 aa		4.2	□□□□□ -1.74
PRP11	YDL043C	LEU2	P04173	364 aa	Predicted RBP	4.19	□□□□□ -1.74
PRP11	YDL043C	CDC31	P06704	161 aa	Known RBP	4.19	□□□□□ -1.74
PRP11	YDL043C	CAD1	P24813	409 aa	Known RBP	4.19	□□□□□ -1.74
PRP11	YDL043C	SWI4	P25302	1093 aa	Known RBP	4.19	□□□□□ -1.74
PRP11	YDL043C	POL12	P38121	705 aa	Predicted RBP	4.19	□□□□□ -1.74
PRP11	YDL043C	CRG1	P38892	291 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
PRP11	YDL043C	AXL2	P38928	823 aa		4.19	□□□□□ -1.74
PRP11	YDL043C	FTR1	P40088	404 aa		4.19	□□□□□ -1.74
PRP11	YDL043C	NDE1	P40215	560 aa		4.19	□□□□□ -1.74
PRP11	YDL043C	FKH2	P41813	862 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms