RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C NGG1P32494 702 aa2.58□□□□□ -2
SIR3YLR442C TIM23P32897 222 aa2.58□□□□□ -2
SIR3YLR442C NUF2P33895 451 aa2.58□□□□□ -2
SIR3YLR442C BAP2P38084 609 aa2.58□□□□□ -2
SIR3YLR442C YAP3P38749 330 aa2.58□□□□□ -2
SIR3YLR442C MPT5P39016 859 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SIR3YLR442C ECM1P39715 212 aa2.58□□□□□ -2
SIR3YLR442C GDI1P39958 451 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C UBP7P40453 1071 aa2.58□□□□□ -2
SIR3YLR442C SLS1P42900 643 aa2.58□□□□□ -2
SIR3YLR442C SAM37P50110 327 aa2.58□□□□□ -2
SIR3YLR442C PIP2P52960 996 aa2.58□□□□□ -2
SIR3YLR442C CAF130P53280 1122 aaPredicted RBP2.58□□□□□ -2
SIR3YLR442C LSB1P53281 241 aa2.58□□□□□ -2
SIR3YLR442C HDA1P53973 706 aa2.58□□□□□ -2
SIR3YLR442C VPS9P54787 451 aa2.58□□□□□ -2
SIR3YLR442C FMP30Q02883 468 aa2.58□□□□□ -2
SIR3YLR442C RVB1Q03940 463 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C BSC2Q05611 235 aa2.58□□□□□ -2
SIR3YLR442C RAD9P14737 1309 aa2.58□□□□□ -2
SIR3YLR442C RPO31P04051 1460 aa2.58□□□□□ -2
SIR3YLR442C RPL8AP17076 256 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C OSM1P21375 501 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C DMC1P25453 334 aa2.58□□□□□ -2
SIR3YLR442C BMH1P29311 267 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C RPL8BP29453 256 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C MCM10P32354 571 aa2.58□□□□□ -2
SIR3YLR442C ASF2P32448 525 aaPredicted RBP2.58□□□□□ -2
SIR3YLR442C DOA4P32571 926 aa2.58□□□□□ -2
SIR3YLR442C MDL1P33310 695 aa2.58□□□□□ -2
SIR3YLR442C STE13P33894 931 aa2.58□□□□□ -2
SIR3YLR442C NEM1P38757 446 aa2.58□□□□□ -2
SIR3YLR442C MBP1P39678 833 aa2.58□□□□□ -2
SIR3YLR442C SEC28P40509 296 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C YIR014WP40570 242 aa2.58□□□□□ -2
SIR3YLR442C GPP1P41277 250 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C AIP1P46680 615 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C URB2P47108 1174 aa2.58□□□□□ -2
SIR3YLR442C SAP4P53036 818 aa2.58□□□□□ -2
SIR3YLR442C LCL3P53153 274 aa2.58□□□□□ -2
SIR3YLR442C SLI1P53304 468 aa2.58□□□□□ -2
SIR3YLR442C MRPL19P53875 158 aa2.58□□□□□ -2
SIR3YLR442C EGD1Q02642 157 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C DPB4Q04603 196 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C NOP6Q07623 225 aaKnown RBP2.58□□□□□ -2
SIR3YLR442C TAH18Q12181 623 aa2.58□□□□□ -2
SIR3YLR442C OSH2Q12451 1283 aa2.58□□□□□ -2
SIR3YLR442C PFK27Q12471 397 aaPredicted RBP2.58□□□□□ -2
SIR3YLR442C RTC1Q08281 1341 aa2.58□□□□□ -2
SIR3YLR442C EDE1P34216 1381 aa2.57□□□□□ -2
SIR3YLR442C VPS34P22543 875 aa2.57□□□□□ -2
SIR3YLR442C RPI1P23250 407 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C RER1P25560 188 aa2.57□□□□□ -2
SIR3YLR442C KRE2P27809 442 aa2.57□□□□□ -2
SIR3YLR442C RME1P32338 300 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C IMP2'P32351 346 aa2.57□□□□□ -2
SIR3YLR442C EUG1P32474 517 aa2.57□□□□□ -2
SIR3YLR442C SRB4P32569 687 aa2.57□□□□□ -2
SIR3YLR442C SWH1P35845 1188 aa2.57□□□□□ -2
SIR3YLR442C LHS1P36016 881 aa2.57□□□□□ -2
SIR3YLR442C RFC1P38630 861 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C LRP1P38801 184 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C SEC31P38968 1273 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C YAR028WP39548 234 aa2.57□□□□□ -2
SIR3YLR442C SAP1P39955 897 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C YRB2P40517 327 aa2.57□□□□□ -2
SIR3YLR442C LOC1P43586 204 aaPredicted RBP2.57□□□□□ -2
SIR3YLR442C YDL183CP48569 320 aa2.57□□□□□ -2
SIR3YLR442C RBG2P53295 368 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C COP1P53622 1201 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C YNR061CP53747 219 aa2.57□□□□□ -2
SIR3YLR442C RPM2Q02773 1202 aa2.57□□□□□ -2
SIR3YLR442C FCP1Q03254 732 aa2.57□□□□□ -2
SIR3YLR442C YML108WQ03759 105 aa2.57□□□□□ -2
SIR3YLR442C SYF1Q04048 859 aaPredicted RBP2.57□□□□□ -2
SIR3YLR442C LCD1Q04377 747 aa2.57□□□□□ -2
SIR3YLR442C EAF1Q06337 982 aa2.57□□□□□ -2
SIR3YLR442C ARO10Q06408 635 aa2.57□□□□□ -2
SIR3YLR442C TDA5Q06417 326 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C PEX19Q07418 342 aa2.57□□□□□ -2
SIR3YLR442C NOP12Q08208 459 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C RRP6Q12149 733 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C MDY2Q12285 212 aa2.57□□□□□ -2
SIR3YLR442C SSM4P40318 1319 aa2.57□□□□□ -2
SIR3YLR442C SSN2P38931 1420 aa2.57□□□□□ -2
SIR3YLR442C PAB1P04147 577 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SIR3YLR442C TRL1P09880 827 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C BIK1P11709 440 aa2.57□□□□□ -2
SIR3YLR442C TRM2P33753 639 aa2.57□□□□□ -2
SIR3YLR442C PET112P33893 541 aa2.57□□□□□ -2
SIR3YLR442C RDH54P38086 958 aa2.57□□□□□ -2
SIR3YLR442C MCM7P38132 845 aa2.57□□□□□ -2
SIR3YLR442C CCZ1P38273 704 aa2.57□□□□□ -2
SIR3YLR442C BCD1P38772 366 aa2.57□□□□□ -2
SIR3YLR442C SPO22P40511 975 aa2.57□□□□□ -2
SIR3YLR442C YGR153WP48238 217 aa2.57□□□□□ -2
SIR3YLR442C TAF4P50105 388 aa2.57□□□□□ -2
SIR3YLR442C PSP2P50109 593 aaKnown RBP2.57□□□□□ -2
SIR3YLR442C DIP5P53388 608 aa2.57□□□□□ -2
SIR3YLR442C OGG1P53397 376 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms