RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	TIP41	Q12199	356 aa		4.55	□□□□□ -1.68
LSB1	YGR136W	YOL087C	Q99247	1116 aa		4.55	□□□□□ -1.68
LSB1	YGR136W	SES1	P07284	462 aa	Known RBP	4.54	□□□□□ -1.68
LSB1	YGR136W	RPS4A	P0CX35	261 aa	Known RBP	4.54	□□□□□ -1.68
LSB1	YGR136W	RPS4B	P0CX36	261 aa	Known RBP	4.54	□□□□□ -1.68
LSB1	YGR136W	SAM1	P10659	382 aa	Known RBP	4.54	□□□□□ -1.68
LSB1	YGR136W	TOP3	P13099	656 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	ALG1	P16661	449 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	PWP2	P25635	923 aa	Known RBP	4.54	□□□□□ -1.68
LSB1	YGR136W	PRO1	P32264	428 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	RPC82	P32349	654 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	PAH1	P32567	862 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	YSC84	P32793	468 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	REC104	P33323	182 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	SAP190	P36123	1033 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	BAP2	P38084	609 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	PHO88	P38264	188 aa	Predicted RBP	4.54	□□□□□ -1.68
LSB1	YGR136W	CCZ1	P38273	704 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	PIK1	P39104	1066 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	PCI8	P40512	444 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	YGL138C	P53122	345 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	MDM1	Q01846	1127 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	SSY1	Q03770	852 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	DUS4	Q06063	367 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	SUE1	Q06524	206 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	MET7	Q08645	548 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	SFI1	Q12369	946 aa		4.54	□□□□□ -1.68
LSB1	YGR136W	HIS4	P00815	799 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	THR4	P16120	514 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
LSB1	YGR136W	VPS1	P21576	704 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	DBP2	P24783	546 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	SRO9	P25567	434 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	GSY2	P27472	705 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	MCM4	P30665	933 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	YRO2	P38079	344 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	YBR284W	P38150	797 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	YBR238C	P38330	731 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	CCT3	P39077	534 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	DSS1	P39112	969 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	MXR1	P40029	184 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	ATG36	P46983	293 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	YGR237C	P50089	785 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	FMS1	P50264	508 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	SSL2	Q00578	843 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	MRS2	Q01926	470 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	ATP25	Q03153	612 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	SLD5	Q03406	294 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	VMS1	Q04311	632 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	TMA64	Q04600	565 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	GSF2	Q04697	403 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	HCR1	Q05775	265 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	MMR1	Q06324	491 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	YLR001C	Q07895	862 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	PUS7	Q08647	676 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	DSE3	Q08729	430 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	TRE1	Q08919	783 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	YPR071W	Q12346	211 aa		4.53	□□□□□ -1.68
LSB1	YGR136W	LPX1	Q12405	387 aa	Known RBP	4.53	□□□□□ -1.68
LSB1	YGR136W	SNF5	P18480	905 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	MEF1	P25039	761 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	SAC6	P32599	642 aa	Known RBP	4.52	□□□□□ -1.69
LSB1	YGR136W	SPC29	P33419	253 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	TGL1	P34163	548 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	SHP1	P34223	423 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	EMC3	P36039	253 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	AIM3	P38266	947 aa	Known RBP	4.52	□□□□□ -1.69
LSB1	YGR136W	NOC2	P39744	710 aa	Known RBP	4.52	□□□□□ -1.69
LSB1	YGR136W	SAH1	P39954	449 aa	Known RBP	4.52	□□□□□ -1.69
LSB1	YGR136W	MGS1	P40151	587 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	YJL045W	P47052	634 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	NIT3	P49954	291 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	RET3	P53600	189 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	UME1	Q03010	460 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	TPP1	Q03796	238 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	GFD1	Q04839	188 aa	Known RBP	4.52	□□□□□ -1.69
LSB1	YGR136W	SML1	Q04964	104 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	SPH1	Q06160	661 aa		4.52	□□□□□ -1.69
LSB1	YGR136W	RAD51	P25454	400 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	VBA3	P25594	458 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	RGT1	P32862	1170 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	STO1	P34160	861 aa	Known RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	MTC2	P34246	357 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	SWH1	P35845	1188 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	MCR1	P36060	302 aa	Known RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	ADE17	P38009	592 aa	Known RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	NDT80	P38830	627 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	RTT107	P38850	1070 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	PEX7	P39108	375 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	TOK1	P40310	691 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	YGR153W	P48238	217 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	ASE1	P50275	885 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	LIF1	P53150	421 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	RIM8	P53179	542 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	VPS62	P53285	467 aa		4.51	□□□□□ -1.69
LSB1	YGR136W	SDA1	P53313	767 aa	Known RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	YGR283C	P53336	341 aa	Predicted RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	BRE5	P53741	515 aa	Known RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	BNI5	P53890	448 aa	Known RBP	4.51	□□□□□ -1.69
LSB1	YGR136W	YMR102C	Q03177	834 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms