RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C FLR1P38124 548 aa1.48□□□□□ -2.17
SEC3YER008C YHR033WP38690 423 aa1.48□□□□□ -2.17
SEC3YER008C AXL2P38928 823 aa1.48□□□□□ -2.17
SEC3YER008C CKB2P38930 258 aa1.48□□□□□ -2.17
SEC3YER008C VPS8P39702 1274 aa1.48□□□□□ -2.17
SEC3YER008C CWC22P53333 577 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C LEE1Q02799 301 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C TRS130Q03660 1102 aa1.48□□□□□ -2.17
SEC3YER008C PLB2Q03674 706 aa1.48□□□□□ -2.17
SEC3YER008C TRM8Q12009 286 aa1.48□□□□□ -2.17
SEC3YER008C NUR1Q12066 484 aa1.48□□□□□ -2.17
SEC3YER008C DCS2Q12123 353 aa1.48□□□□□ -2.17
SEC3YER008C YDL177CQ12257 170 aa1.48□□□□□ -2.17
SEC3YER008C APC1P53886 1748 aa1.48□□□□□ -2.17
SEC3YER008C YLR358CO13565 187 aa1.48□□□□□ -2.17
SEC3YER008C NCP1P16603 691 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C DGR2P32330 852 aa1.48□□□□□ -2.17
SEC3YER008C YKR051WP36142 418 aa1.48□□□□□ -2.17
SEC3YER008C IFA38P38286 347 aa1.48□□□□□ -2.17
SEC3YER008C BIT2P38346 545 aa1.48□□□□□ -2.17
SEC3YER008C CCT3P39077 534 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C IES1P43579 692 aa1.48□□□□□ -2.17
SEC3YER008C YFR016CP43597 1233 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C UPF3P48412 387 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C HOL1P53389 586 aa1.48□□□□□ -2.17
SEC3YER008C ASM4Q05166 528 aa1.48□□□□□ -2.17
SEC3YER008C NEW1Q08972 1196 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C HIS5P07172 385 aa1.48□□□□□ -2.17
SEC3YER008C AEP2P22136 580 aa1.48□□□□□ -2.17
SEC3YER008C HCM1P25364 564 aa1.48□□□□□ -2.17
SEC3YER008C SEC65P29478 273 aa1.48□□□□□ -2.17
SEC3YER008C HOG1P32485 435 aa1.48□□□□□ -2.17
SEC3YER008C MNN4P36044 1178 aa1.48□□□□□ -2.17
SEC3YER008C LNP1P38878 278 aa1.48□□□□□ -2.17
SEC3YER008C SPC72P39723 622 aa1.48□□□□□ -2.17
SEC3YER008C TPA1P40032 644 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C LYS14P40971 790 aa1.48□□□□□ -2.17
SEC3YER008C MAD3P47074 515 aa1.48□□□□□ -2.17
SEC3YER008C RNR4P49723 345 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C YGR250CP53316 781 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C HDA1P53973 706 aa1.48□□□□□ -2.17
SEC3YER008C VIP1Q06685 1146 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C CDA1Q06702 301 aa1.48□□□□□ -2.17
SEC3YER008C YPR027CQ12079 277 aa1.48□□□□□ -2.17
SEC3YER008C CAF20P12962 161 aaKnown RBP1.47□□□□□ -2.17
SEC3YER008C BLI1P35727 113 aa1.47□□□□□ -2.17
SEC3YER008C MSS4P38994 779 aa1.47□□□□□ -2.17
SEC3YER008C SIT1P39980 628 aa1.47□□□□□ -2.17
SEC3YER008C LTP1P40347 161 aa1.47□□□□□ -2.17
SEC3YER008C ARC35P53731 342 aaKnown RBP1.47□□□□□ -2.17
SEC3YER008C MSC2Q03455 724 aa1.47□□□□□ -2.17
SEC3YER008C ARA2Q04212 335 aa1.47□□□□□ -2.17
SEC3YER008C TGL5Q12043 749 aa1.47□□□□□ -2.17
SEC3YER008C RRG1Q12167 365 aaPredicted RBP1.47□□□□□ -2.17
SEC3YER008C RRI2Q12348 645 aa1.47□□□□□ -2.17
SEC3YER008C ENT1Q12518 454 aa1.47□□□□□ -2.17
SEC3YER008C RMP1Q12530 201 aa1.47□□□□□ -2.17
SEC3YER008C CDC43P18898 376 aa1.47□□□□□ -2.17
SEC3YER008C MTH1P35198 433 aa1.47□□□□□ -2.17
SEC3YER008C SHM2P37291 469 aaKnown RBP1.47□□□□□ -2.17
SEC3YER008C ZIP2P53061 704 aa1.47□□□□□ -2.17
SEC3YER008C ARP4P80428 489 aa1.47□□□□□ -2.17
SEC3YER008C ERO1Q03103 563 aa1.47□□□□□ -2.17
SEC3YER008C CTK1Q03957 528 aaKnown RBP1.47□□□□□ -2.17
SEC3YER008C MLC2Q06580 163 aa1.47□□□□□ -2.17
SEC3YER008C VHS3Q08438 674 aa1.47□□□□□ -2.17
SEC3YER008C STH1P32597 1359 aa1.47□□□□□ -2.17
SEC3YER008C CYB2P00175 591 aa1.47□□□□□ -2.17
SEC3YER008C ADH4P10127 382 aa1.47□□□□□ -2.17
SEC3YER008C YHR202WP38887 602 aa1.47□□□□□ -2.17
SEC3YER008C ACA1P39970 489 aa1.47□□□□□ -2.17
SEC3YER008C MEP1P40260 492 aa1.47□□□□□ -2.17
SEC3YER008C FAF1P40546 346 aaPredicted RBP1.47□□□□□ -2.17
SEC3YER008C SAP185P40856 1058 aa1.47□□□□□ -2.17
SEC3YER008C VTC2P43585 828 aa1.47□□□□□ -2.17
SEC3YER008C MUP1P50276 574 aa1.47□□□□□ -2.17
SEC3YER008C AAT1Q01802 451 aa1.47□□□□□ -2.17
SEC3YER008C DLT1Q04216 342 aa1.47□□□□□ -2.17
SEC3YER008C TDA9Q04545 1251 aa1.47□□□□□ -2.17
SEC3YER008C CWC2Q12046 339 aaPredicted RBP1.47□□□□□ -2.17
SEC3YER008C TUB2P02557 457 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C SNF1P06782 633 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C PYC1P11154 1178 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C ATG19P35193 415 aa1.46□□□□□ -2.18
SEC3YER008C YIL092WP40497 633 aa1.46□□□□□ -2.18
SEC3YER008C NOP2P40991 618 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C INP52P50942 1183 aa1.46□□□□□ -2.18
SEC3YER008C YKU80Q04437 629 aa1.46□□□□□ -2.18
SEC3YER008C MED1Q12321 566 aa1.46□□□□□ -2.18
SEC3YER008C ECM3Q99252 613 aa1.46□□□□□ -2.18
SEC3YER008C SSM4P40318 1319 aa1.46□□□□□ -2.18
SEC3YER008C MET17P06106 444 aa1.46□□□□□ -2.18
SEC3YER008C RPP1P38786 293 aa1.46□□□□□ -2.18
SEC3YER008C REV7P38927 245 aa1.46□□□□□ -2.18
SEC3YER008C UBP5P39944 805 aa1.46□□□□□ -2.18
SEC3YER008C PFA3P42836 336 aa1.46□□□□□ -2.18
SEC3YER008C MNN10P50108 393 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C EXG2P52911 562 aa1.46□□□□□ -2.18
SEC3YER008C SSL2Q00578 843 aa1.46□□□□□ -2.18
SEC3YER008C VMS1Q04311 632 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms